6VFY | pdb_00006vfy

Crystal structure of mouse acyl-CoA thioesterase 7 with CoA

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C [auth F]	d6vfyf1	Alpha and beta proteins (a+b)	Thioesterase/thiol ester dehydrase-isomerase	Thioesterase/thiol ester dehydrase-isomerase	automated matches	automated matches	Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
B [auth E]	d6vfye1	Alpha and beta proteins (a+b)	Thioesterase/thiol ester dehydrase-isomerase	Thioesterase/thiol ester dehydrase-isomerase	automated matches	automated matches	Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
A [auth D]	d6vfyd1	Alpha and beta proteins (a+b)	Thioesterase/thiol ester dehydrase-isomerase	Thioesterase/thiol ester dehydrase-isomerase	automated matches	automated matches	Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C [auth F]	SCOP2B Superfamily	Thioesterase/thiol ester dehydrase-isomerase-like	8081264	3000149	SCOP2B (2022-06-29)
B [auth E]	SCOP2B Superfamily	Thioesterase/thiol ester dehydrase-isomerase-like	8081264	3000149	SCOP2B (2022-06-29)
A [auth D]	SCOP2B Superfamily	Thioesterase/thiol ester dehydrase-isomerase-like	8081264	3000149	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth F]	Cytochrome_C554	e6vfyF1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Cytochrome_C554	ECOD (v294.1)
B [auth E]	Cytochrome_C554	e6vfyE1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Cytochrome_C554	ECOD (v294.1)
A [auth D]	JmjC,JmjN	e6vfyD1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: JmjC,JmjN	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C [auth F]	3.10.129.10	Alpha Beta	Roll	Thiol Ester Dehydrase	Chain A	CATH (utative)
B [auth E]	3.10.129.10	Alpha Beta	Roll	Thiol Ester Dehydrase	Chain A	CATH (utative)
A [auth D]	3.10.129.10	Alpha Beta	Roll	Thiol Ester Dehydrase	Chain A	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth D], B [auth E], C [auth F]	PF03061	Thioesterase superfamily (4HBT)	Thioesterase superfamily	This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (EC 3.1.2.23) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas ...	This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (EC 3.1.2.23) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth D], B [auth E], C [auth F]	Cytosolic acyl coenzyme A thioester hydrolase	identical protein binding protein binding binding protein homodimerization activity protein dimerization activity hydrolase activity, acting on ester bonds thiolester hydrolase activity deacylase activity hydrolase activity fatty acyl-CoA hydrolase activity catalytic activity long-chain fatty acyl-CoA hydrolase activity acyl-CoA hydrolase activity carboxylic ester hydrolase activity identical protein binding protein binding binding protein homodimerization activity protein dimerization activity hydrolase activity, acting on ester bonds thiolester hydrolase activity deacylase activity hydrolase activity fatty acyl-CoA hydrolase activity catalytic activity long-chain fatty acyl-CoA hydrolase activity acyl-CoA hydrolase activity carboxylic ester hydrolase activity long-chain fatty acyl-CoA binding fatty-acyl-CoA binding acyl-CoA binding nucleoside phosphate binding ion binding anion binding lipid binding heterocyclic compound binding fatty acid derivative binding small molecule binding sulfur compound binding	nucleoside phosphate metabolic process primary metabolic process purine-containing compound metabolic process nucleobase-containing compound metabolic process acyl-CoA metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process phosphate-containing compound metabolic process sulfur compound metabolic process metabolic process cellular process small molecule metabolic process phosphorus metabolic process catabolic process nucleoside phosphate metabolic process primary metabolic process purine-containing compound metabolic process nucleobase-containing compound metabolic process acyl-CoA metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process phosphate-containing compound metabolic process sulfur compound metabolic process metabolic process cellular process small molecule metabolic process phosphorus metabolic process catabolic process fatty-acyl-CoA catabolic process organophosphate catabolic process nucleoside phosphate catabolic process fatty acid derivative catabolic process fatty-acyl-CoA metabolic process lipid catabolic process purine-containing compound catabolic process fatty acid derivative metabolic process nucleobase-containing compound catabolic process medium-chain fatty-acyl-CoA catabolic process sulfur compound catabolic process medium-chain fatty-acyl-CoA metabolic process lipid metabolic process fatty acid metabolic process oxoacid metabolic process carboxylic acid metabolic process organic acid metabolic process organic acid catabolic process fatty acid catabolic process monocarboxylic acid catabolic process carboxylic acid catabolic process monocarboxylic acid metabolic process small molecule catabolic process medium-chain fatty acid biosynthetic process monocarboxylic acid biosynthetic process small molecule biosynthetic process lipid biosynthetic process organic acid biosynthetic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process medium-chain fatty acid metabolic process long-chain fatty-acyl-CoA metabolic process long-chain fatty-acyl-CoA catabolic process long-chain fatty acid metabolic process palmitic acid biosynthetic process long-chain fatty acid biosynthetic process coenzyme A biosynthetic process nucleobase-containing compound biosynthetic process sulfur compound biosynthetic process organophosphate biosynthetic process purine-containing compound biosynthetic process nucleoside phosphate biosynthetic process coenzyme A metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell body membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell body membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen mitochondrion mitochondrial matrix cell projection neuron projection plasma membrane bounded cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth D], B [auth E], C [auth F]	IPR040170	Cytosolic acyl coenzyme A thioester hydrolase	Family
A [auth D], B [auth E], C [auth F]	IPR029069	HotDog domain superfamily	Homologous Superfamily
A [auth D], B [auth E], C [auth F]	IPR033120	Hotdog acyl-CoA thioesterase (ACOT)-type domain	Domain
A [auth D], B [auth E], C [auth F]	IPR006683	Thioesterase domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.