6VBV

Structure of the bovine BBSome:ARL6:GTP complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth 4]F_UNCLASSIFIEDe6vbv41 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: F_UNCLASSIFIEDECOD (1.6)
I [auth 3]PF00025e6vbv31 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00025ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
I [auth 3]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 0]PF14777Cilia BBSome complex subunit 10 (BBIP10)Cilia BBSome complex subunit 10- Family
B [auth 1]PF14779Ciliary BBSome complex subunit 1 (BBS1)Ciliary BBSome complex subunit 1- Repeat
C [auth 2]PF14781Ciliary BBSome complex subunit 2, N-terminal (BBS2_N)Ciliary BBSome complex subunit 2, N-terminal- Repeat
C [auth 2]PF14782Ciliary BBSome complex subunit 2, C-terminal (BBS2_C)Ciliary BBSome complex subunit 2, C-terminal- Family
C [auth 2]PF14783Ciliary BBSome complex subunit 2, middle region (BBS2_Mid)Ciliary BBSome complex subunit 2, middle region- Repeat
D [auth 4]PF14559Tetratricopeptide repeat (TPR_19)Tetratricopeptide repeat- Repeat
D [auth 4]PF13181Tetratricopeptide repeat (TPR_8)Tetratricopeptide repeat- Repeat
D [auth 4]PF13414TPR repeat (TPR_11)TPR repeat- Repeat
E [auth 5]PF07289Bardet-Biedl syndrome 5 protein (BBL5)Bardet-Biedl syndrome 5 protein- Family
G [auth 8]PF13181Tetratricopeptide repeat (TPR_8)Tetratricopeptide repeat- Repeat
G [auth 8]PF13424Tetratricopeptide repeat (TPR_12)Tetratricopeptide repeat- Repeat
H [auth 9]PF14727PTHB1 N-terminus (PHTB1_N)PTHB1 N-terminus- Repeat
H [auth 9]PF14728PTHB1 C-terminus (PHTB1_C)PTHB1 C-terminus- Family
I [auth 3]PF00025ADP-ribosylation factor family (Arf)ADP-ribosylation factor familyPfam combines a number of different Prosite families togetherDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]Bardet-Biedl syndrome 18 protein-
B [auth 1]BBS1 domain-containing protein
C [auth 2]Bardet-Biedl syndrome 2 protein homolog-
D [auth 4]Bardet-Biedl syndrome 4 protein homolog
E [auth 5]Bardet-Biedl syndrome 5 protein homolog
F [auth 7]Bardet-Biedl syndrome 7 protein homolog-
G [auth 8]Tetratricopeptide repeat domain 8
H [auth 9]Bardet-Biedl syndrome 9-
I [auth 3]ADP-ribosylation factor-like protein 6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0]IPR028233Cilia BBSome complex subunit 10Family
B [auth 1]IPR028784Bardet-Biedl syndrome 1 proteinFamily
B [auth 1]IPR011047Quinoprotein alcohol dehydrogenase-like superfamilyHomologous Superfamily
B [auth 1]IPR032728Bardet-Biedl syndrome 1, N-terminalDomain
C [auth 2]IPR029429Ciliary BBSome complex subunit 2, middle regionDomain
C [auth 2]IPR016616Bardet-Biedl syndrome 2 proteinFamily
C [auth 2]IPR029430Ciliary BBSome complex subunit 2, N-terminalDomain
C [auth 2]IPR029333Ciliary BBSome complex subunit 2, C-terminal domainDomain
C [auth 2]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
D [auth 4]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
D [auth 4]IPR019734Tetratricopeptide repeatRepeat
E [auth 5]IPR030804Bardet-Biedl syndrome 5 protein/sex-determination protein fem-3Family
E [auth 5]IPR006606Bardet-Biedl syndrome 5 proteinFamily
E [auth 5]IPR014003DM16 repeatRepeat
E [auth 5]IPR011993PH-like domain superfamilyHomologous Superfamily
F [auth 7]IPR016575Bardet-Biedl syndrome 7 proteinFamily
F [auth 7]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
F [auth 7]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
G [auth 8]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
G [auth 8]IPR019734Tetratricopeptide repeatRepeat
G [auth 8]IPR028796Tetratricopeptide repeat protein 8Family
H [auth 9]IPR026511Parathyroid hormone-responsive B1Family
H [auth 9]IPR028074PTHB1, C-terminal domainDomain
H [auth 9]IPR028073PTHB1, N-terminal domainDomain
I [auth 3]IPR041839ADP-ribosylation factor-like protein 6Family
I [auth 3]IPR005225Small GTP-binding protein domainDomain
I [auth 3]IPR006689Small GTPase superfamily, ARF/SAR typeFamily
I [auth 3]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily