6U48

E. coli 50S with phazolicin (PHZ) bound in exit tunnel


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth CK]SCOP2B SuperfamilyRibosomal protein L138096350 3001134 SCOP2B (2022-06-29)
K [auth CL]SCOP2 FamilyRibosomal protein L148096341 4001826 SCOP2 (2022-06-29)
K [auth CL]SCOP2 Superfamily50S Ribosomal protein L14-like8096342 3000433 SCOP2 (2022-06-29)
K [auth CL]SCOP2B Superfamily50S Ribosomal protein L14-like8103358 3000433 SCOP2B (2022-06-29)
L [auth CM]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8070553 3001045 SCOP2B (2022-06-29)
M [auth CN]SCOP2 FamilyRibosomal protein L16p8097997 4003717 SCOP2 (2022-06-29)
M [auth CN]SCOP2 SuperfamilyRibosomal protein L16p/L10e8097998 3000884 SCOP2 (2022-06-29)
M [auth CN]SCOP2B SuperfamilyRibosomal protein L16p/L10e8096366 3000884 SCOP2B (2022-06-29)
N [auth CO]SCOP2B SuperfamilyProkaryotic ribosomal protein L178035409 3000995 SCOP2B (2022-06-29)
O [auth CP]SCOP2 FamilyRibosomal protein L18p and S118097939 4000555 SCOP2 (2022-06-29)
O [auth CP]SCOP2 SuperfamilyTranslational machinery components8097940 3000571 SCOP2 (2022-06-29)
O [auth CP]SCOP2B SuperfamilyTranslational machinery components8032969 3000571 SCOP2B (2022-06-29)
P [auth CQ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096364 3000334 SCOP2B (2022-06-29)
Q [auth CR]SCOP2 FamilyRibosomal protein L208097929 4001930 SCOP2 (2022-06-29)
Q [auth CR]SCOP2 SuperfamilyRibosomal protein L208097930 3000563 SCOP2 (2022-06-29)
Q [auth CR]SCOP2B SuperfamilyRibosomal protein L208096382 3000563 SCOP2B (2022-06-29)
R [auth CS]SCOP2B Superfamilyl21p-like8096354 3002005 SCOP2B (2022-06-29)
S [auth CT]SCOP2B SuperfamilyRibosomal protein L228096336 3001078 SCOP2B (2022-06-29)
T [auth CU]SCOP2 FamilyL23p8093561 4000943 SCOP2 (2022-06-29)
T [auth CU]SCOP2 SuperfamilyRibosomal proteins S24e L23 and L15e8093562 3000210 SCOP2 (2022-06-29)
T [auth CU]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8035415 3000210 SCOP2B (2022-06-29)
U [auth CV]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096358 3000334 SCOP2B (2022-06-29)
V [auth CW]SCOP2B SuperfamilyRibosomal protein L25-like8042538 3001161 SCOP2B (2022-06-29)
W [auth CX]SCOP2 FamilyRibosomal L27 protein8093453 4001900 SCOP2 (2022-06-29)
W [auth CX]SCOP2 SuperfamilyRibosomal L27 protein-like8093454 3000539 SCOP2 (2022-06-29)
W [auth CX]SCOP2B SuperfamilyRibosomal L27 protein-like8096338 3000539 SCOP2B (2022-06-29)
X [auth CY]SCOP2B SuperfamilyL28p-like8035424 3001966 SCOP2B (2022-06-29)
Y [auth CZ]SCOP2 FamilyRibosomal protein L29 (L29p)8097647 4000600 SCOP2 (2022-06-29)
Y [auth CZ]SCOP2 SuperfamilyRibosomal protein L29 (L29p)8097648 3000713 SCOP2 (2022-06-29)
Y [auth CZ]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8096370 3000713 SCOP2B (2022-06-29)
Z [auth C0]SCOP2 FamilyRibosomal protein L30p/L7e8096085 4001360 SCOP2 (2022-06-29)
Z [auth C0]SCOP2 SuperfamilyRibosomal protein L30p/L7e8096086 3001378 SCOP2 (2022-06-29)
Z [auth C0]SCOP2B SuperfamilyRibosomal protein L30p/L7e8096372 3001378 SCOP2B (2022-06-29)
AA [auth C1]SCOP2B SuperfamilyZn-binding ribosomal proteins8096380 3001320 SCOP2B (2022-06-29)
BA [auth C2]SCOP2 FamilyRibosomal protein L33p8093585 4000511 SCOP2 (2022-06-29)
BA [auth C2]SCOP2 SuperfamilyZn-binding ribosomal proteins8093586 3001320 SCOP2 (2022-06-29)
BA [auth C2]SCOP2B SuperfamilyZn-binding ribosomal proteins8096362 3001320 SCOP2B (2022-06-29)
C [auth CC]SCOP2B SuperfamilyNucleic acid-binding proteins8035394 3000135 SCOP2B (2022-06-29)
C [auth CC]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8035393 3000334 SCOP2B (2022-06-29)
DA [auth C4]SCOP2B SuperfamilyL35p-like8035388 3000790 SCOP2B (2022-06-29)
EA [auth C5]SCOP2B SuperfamilyRibosomal protein L368035391 3001346 SCOP2B (2022-06-29)
D [auth CD]SCOP2 FamilyRibosomal protein L38093451 4002103 SCOP2 (2022-06-29)
D [auth CD]SCOP2 SuperfamilyTranslational proteins8093452 3000811 SCOP2 (2022-06-29)
D [auth CD]SCOP2B SuperfamilyTranslational proteins8032955 3000811 SCOP2B (2022-06-29)
E [auth CE]SCOP2B SuperfamilyRibosomal protein L48096356 3001146 SCOP2B (2022-06-29)
F [auth CF]SCOP2 FamilyRibosomal protein L58100893 4001498 SCOP2 (2022-06-29)
F [auth CF]SCOP2 SuperfamilyRL5-like8100894 3001709 SCOP2 (2022-06-29)
F [auth CF]SCOP2B SuperfamilyRL5-like8096352 3001709 SCOP2B (2022-06-29)
G [auth CG]SCOP2B SuperfamilyRibosomal protein L68035398 3000724 SCOP2B (2022-06-29)
G [auth CG]SCOP2B SuperfamilyRibosomal protein L68035397 3000724 SCOP2B (2022-06-29)
H [auth CH]SCOP2B SuperfamilyRibosomal protein L9 C-domain8032958 3000329 SCOP2B (2022-06-29)
H [auth CH]SCOP2B SuperfamilyL9 N-domain-like8032960 3000338 SCOP2B (2022-06-29)
I [auth CJ]SCOP2B SuperfamilyRibosomal protein L11 C-terminal domain8032961 3001186 SCOP2B (2022-06-29)
I [auth CJ]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like8032963 3000950 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth CK]PF00572e6u48CK1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
K [auth CL]PF00238e6u48CL1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
L [auth CM]PF00828e6u48CM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
M [auth CN]PF00252e6u48CN1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
N [auth CO]PF01196e6u48CO1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
O [auth CP]PF00861e6u48CP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
P [auth CQ]PF01245e6u48CQ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
Q [auth CR]PF00453e6u48CR1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
R [auth CS]PF00829e6u48CS1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
S [auth CT]PF00237e6u48CT1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
T [auth CU]PF00276e6u48CU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
U [auth CV]PF00467,PF17136e6u48CV1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
V [auth CW]PF01386e6u48CW1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
W [auth CX]PF01016e6u48CX1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
X [auth CY]PF00830e6u48CY1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
Y [auth CZ]PF00831e6u48CZ1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
Z [auth C0]PF00327e6u48C01 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
AA [auth C1]PF01783e6u48C11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
BA [auth C2]PF00471e6u48C21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
CA [auth C3]PF00468e6u48C31 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
C [auth CC]PF00181e6u48CC1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
C [auth CC]PF03947e6u48CC2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
DA [auth C4]PF01632e6u48C41 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
EA [auth C5]PF00444e6u48C51 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
D [auth CD]PF00297e6u48CD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
E [auth CE]PF00573e6u48CE1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
F [auth CF]PF00281,PF00673e6u48CF1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
G [auth CG]PF00347e6u48CG2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
H [auth CH]PF01281e6u48CH2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
H [auth CH]PF03948e6u48CH1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: PF03948ECOD (1.6)
I [auth CJ]PF00298e6u48CJ2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
I [auth CJ]PF03946e6u48CJ1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth CK]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
K [auth CL]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
L [auth CM]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
M [auth CN]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
N [auth CO]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
O [auth CP]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
P [auth CQ]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
Q [auth CR]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
R [auth CS]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
S [auth CT]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
T [auth CU]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
U [auth CV]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
U [auth CV]PF00467KOW motif (KOW)KOW motif- Family
V [auth CW]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
W [auth CX]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
X [auth CY]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
Y [auth CZ]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
Z [auth C0]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
AA [auth C1]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
BA [auth C2]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
CA [auth C3]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
C [auth CC]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
C [auth CC]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
DA [auth C4]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
EA [auth C5]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
D [auth CD]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
E [auth CE]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth CF]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
F [auth CF]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
G [auth CG]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
H [auth CH]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
H [auth CH]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
I [auth CJ]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
I [auth CJ]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth CA]23S rRNA---
J [auth CK]50S ribosomal protein uL13
K [auth CL]50S ribosomal protein uL14
L [auth CM]50S ribosomal protein uL15
M [auth CN]50S ribosomal protein uL16
N [auth CO]50S ribosomal protein bL17
O [auth CP]50S ribosomal protein uL18
P [auth CQ]50S ribosomal protein bL19
Q [auth CR]50S ribosomal protein bL20
R [auth CS]50S ribosomal protein bL21
S [auth CT]50S ribosomal protein uL22
B [auth CB]5S rRNA---
T [auth CU]50S ribosomal protein uL23
U [auth CV]50S ribosomal protein uL24
V [auth CW]50S ribosomal protein bL25
W [auth CX]50S ribosomal protein bL27
X [auth CY]50S ribosomal protein bL28
Y [auth CZ]50S ribosomal protein uL29
Z [auth C0]50S ribosomal protein uL30
AA [auth C1]50S ribosomal protein bL32
BA [auth C2]50S ribosomal protein bL33
CA [auth C3]50S ribosomal protein bL34
C [auth CC]50S ribosomal protein uL2
DA [auth C4]50S ribosomal protein bL35
EA [auth C5]50S ribosomal protein bL36
FA [auth A]phazolicin---
D [auth CD]50S ribosomal protein uL3
E [auth CE]50S ribosomal protein uL4
F [auth CF]50S ribosomal protein uL5
G [auth CG]50S ribosomal protein uL6
H [auth CH]50S ribosomal protein bL9
I [auth CJ]50S ribosomal protein uL11

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth CK]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
J [auth CK]IPR005822Large ribosomal subunit protein uL13Family
J [auth CK]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
J [auth CK]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
K [auth CL]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
K [auth CL]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
K [auth CL]IPR000218Large ribosomal subunit protein uL14Family
K [auth CL]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
L [auth CM]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
L [auth CM]IPR021131Large ribosomal subunit protein uL15/eL18Domain
L [auth CM]IPR030878Large ribosomal subunit protein uL15Family
L [auth CM]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
L [auth CM]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
M [auth CN]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
M [auth CN]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
M [auth CN]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
M [auth CN]IPR016180Large ribosomal subunit protein uL16 domainDomain
M [auth CN]IPR047873Large ribosomal subunit protein uL16Family
N [auth CO]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
N [auth CO]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
N [auth CO]IPR000456Large ribosomal subunit protein bL17Family
O [auth CP]IPR005484Large ribosomal subunit protein uL18Family
O [auth CP]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
P [auth CQ]IPR001857Large ribosomal subunit protein bL19Family
P [auth CQ]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
P [auth CQ]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
P [auth CQ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth CR]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
Q [auth CR]IPR005813Large ribosomal subunit protein bL20Family
R [auth CS]IPR028909Large ribosomal subunit protein bL21-likeFamily
R [auth CS]IPR001787Large ribosomal subunit protein bL21Family
R [auth CS]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
R [auth CS]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
S [auth CT]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
S [auth CT]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth CT]IPR001063Large ribosomal subunit protein uL22Family
S [auth CT]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
S [auth CT]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
T [auth CU]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
T [auth CU]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
T [auth CU]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
T [auth CU]IPR013025Large ribosomal subunit protein uL23-likeFamily
U [auth CV]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth CV]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth CV]IPR003256Large ribosomal subunit protein uL24Family
U [auth CV]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
U [auth CV]IPR005824KOWDomain
U [auth CV]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
V [auth CW]IPR020055Ribosomal protein bL25, short-formFamily
V [auth CW]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
V [auth CW]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
V [auth CW]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
W [auth CX]IPR001684Large ribosomal subunit protein bL27Family
W [auth CX]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
X [auth CY]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
X [auth CY]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
X [auth CY]IPR026569Large ribosomal subunit protein bL28Family
X [auth CY]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
Y [auth CZ]IPR001854Large ribosomal subunit protein uL29Family
Y [auth CZ]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
Y [auth CZ]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Z [auth C0]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
Z [auth C0]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
Z [auth C0]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Z [auth C0]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
AA [auth C1]IPR002677Large ribosomal subunit protein bL32Family
AA [auth C1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth C1]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
BA [auth C2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth C2]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth C2]IPR001705Large ribosomal subunit protein bL33Family
BA [auth C2]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
CA [auth C3]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CA [auth C3]IPR000271Large ribosomal subunit protein bL34Family
C [auth CC]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth CC]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth CC]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth CC]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth CC]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
C [auth CC]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth CC]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth CC]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth CC]IPR002171Large ribosomal subunit protein uL2Family
DA [auth C4]IPR021137Large ribosomal subunit protein bL35-likeFamily
DA [auth C4]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
DA [auth C4]IPR001706Large ribosomal subunit protein bL35Family
DA [auth C4]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
EA [auth C5]IPR000473Large ribosomal subunit protein bL36Family
EA [auth C5]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
D [auth CD]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth CD]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth CD]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth CD]IPR000597Large ribosomal subunit protein uL3Family
E [auth CE]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth CE]IPR002136Large ribosomal subunit protein uL4Family
E [auth CE]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth CF]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
F [auth CF]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth CF]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
F [auth CF]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
F [auth CF]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
F [auth CF]IPR002132Large ribosomal subunit protein uL5Family
G [auth CG]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
G [auth CG]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
G [auth CG]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
G [auth CG]IPR000702Large ribosomal subunit protein uL6-likeFamily
G [auth CG]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
H [auth CH]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
H [auth CH]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
H [auth CH]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
H [auth CH]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
H [auth CH]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
H [auth CH]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
H [auth CH]IPR000244Large ribosomal subunit protein bL9Family
I [auth CJ]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
I [auth CJ]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
I [auth CJ]IPR000911Ribosomal protein uL11Family
I [auth CJ]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
I [auth CJ]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
I [auth CJ]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
I [auth CJ]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth CA]1MG Parent Component: G

A [auth CA]2MA Parent Component: A

A [auth CA]2MG Parent Component: G

A [auth CA]3TD Parent Component: U

A [auth CA]5MC Parent Component: C

A [auth CA]5MU Parent Component: U

A [auth CA]6MZ Parent Component: A

A [auth CA]G7M Parent Component: G

A [auth CA]H2U Parent Component: U

A [auth CA]OMC Parent Component: C

A [auth CA]OMG Parent Component: G

A [auth CA]OMU Parent Component: U

A [auth CA]PSU Parent Component: U

M [auth CN]4D4 Parent Component: ARG

FA [auth A]A0G
FA [auth A]BB9 Parent Component: CYS

RESIDAA0241 , AA0242 , AA0243 , AA0244 , AA0466 , AA0467 , AA0485 , AA0541

PSI-MOD :  glycine thiazole-4-carboxylic acid MOD:00246 , L-serine thiazole-4-carboxylic acid MOD:00247 , L-phenylalanine thiazole-4-carboxylic acid MOD:00248 , L-cysteine thiazole-4-carboxylic acid MOD:00249 , L-isoleucine thiazole-4-carboxylic acid MOD:01389 , L-valine thiazole-4-carboxylic acid MOD:01390 , L-threonine thiazoline-4-carboxylic acid MOD:01408 , L-glutamate thiazole-4-carboxylic acid MOD:01815
D [auth CD]MEQ Parent Component: GLN

RESIDAA0241 , AA0242 , AA0243 , AA0244 , AA0466 , AA0467 , AA0485 , AA0541 , AA0071

PSI-MOD :  glycine thiazole-4-carboxylic acid MOD:00246 , L-serine thiazole-4-carboxylic acid MOD:00247 , L-phenylalanine thiazole-4-carboxylic acid MOD:00248 , L-cysteine thiazole-4-carboxylic acid MOD:00249 , L-isoleucine thiazole-4-carboxylic acid MOD:01389 , L-valine thiazole-4-carboxylic acid MOD:01390 , L-threonine thiazoline-4-carboxylic acid MOD:01408 , L-glutamate thiazole-4-carboxylic acid MOD:01815 , N5-methyl-L-glutamine MOD:00080