Annotations: 6RFL

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth B]	PF00562	e6rflB2	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: double psi	F: PF00562	ECOD (1.6)
A [auth B]	PF00562	e6rflB6	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Single hybrid motif	F: PF00562	ECOD (1.6)
A [auth B]	PF04565	e6rflB1	A: a+b complex topology	X: N-terminal domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	H: N-terminal domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	T: N-terminal domain in beta subunit of DNA dependent RNA-polymerase	F: PF04565	ECOD (1.6)
A [auth B]	PF12415	e6rflB5	A: a+b complex topology	X: insertion domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	H: insertion domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	T: insertion domain in beta subunit of DNA dependent RNA-polymerase	F: PF12415	ECOD (1.6)
A [auth B]	PF04567	e6rflB4	A: a+b complex topology	X: barrel domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	H: barrel domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	T: barrel domain in beta subunit of DNA dependent RNA-polymerase	F: PF04567	ECOD (1.6)
A [auth B]	PF04560	e6rflB3	A: a+b complex topology	X: C-terminal domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	H: C-terminal domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	T: C-terminal domain in beta subunit of DNA dependent RNA-polymerase	F: PF04560	ECOD (1.6)
A [auth B]	F_UNCLASSIFIED	e6rflB7	A: a+b complex topology	X: inserted a+b domain in yeast RNA polymerase beta subunit (From Topology)	H: inserted a+b domain in yeast RNA polymerase beta subunit (From Topology)	T: inserted a+b domain in yeast RNA polymerase beta subunit	F: F_UNCLASSIFIED	ECOD (1.6)
F [auth J]	PF05864	e6rflJ1	A: alpha arrays	X: HTH	H: RPB10 (From Topology)	T: RPB10	F: PF05864	ECOD (1.6)
G [auth L]	PF03341	e6rflL1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: PF03341	ECOD (1.6)
H [auth O]	PF21005	e6rflO2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF21005	ECOD (1.6)
H [auth O]	PF21004	e6rflO4	A: a+b complex topology	X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)	H: Protein kinase/SAICAR synthase/ATP-grasp	T: ATP-grasp	F: PF21004	ECOD (1.6)
H [auth O]	PF10640	e6rflO3	A: a+b complex topology	X: mRNA triphosphatase CET1-related (From Topology)	H: mRNA triphosphatase CET1-related (From Topology)	T: mRNA triphosphatase CET1-related	F: PF10640	ECOD (1.6)
H [auth O]	PF03291	e6rflO1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: PF03291	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
G [auth L]	3.40.50.11680	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Poxvirus mRNA capping enzyme, small subunit	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
E [auth I]	PF03294	RNA polymerase-associated transcription specificity factor, Rap94 (Pox_Rap94)	RNA polymerase-associated transcription specificity factor, Rap94	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B]	DNA-dependent RNA polymerase subunit rpo132	-	-	-
J [auth K]	Transcription factor VETF 82kDa large subunit	-	-	-
K [auth U]	chr17.trna16-GlnTTG	-	-	-
L [auth A]	DNA-dependent RNA polymerase subunit rpo147	-	-	-
N [auth Y]	Nucleoside triphosphate phosphohydrolase-I	-	-	-
O [auth C]	DNA-directed RNA polymerase 35 kDa subunit	-	-	-
P [auth S]	DNA-directed RNA polymerase 30 kDa polypeptide	-	-	-
B [auth E]	DNA-directed RNA polymerase subunit	-	-	-
C [auth F]	DNA-directed RNA polymerase 19 kDa subunit	-	-	-
D [auth G]	DNA-dependent RNA polymerase subunit rpo18	-	-	-
E [auth I]	Putative H4L RNA polymerase-associated transcription factor RAP94	transcription regulator activity DNA-binding transcription factor activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression DNA-templated transcription termination macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription organic cyclic compound metabolic process nucleic acid biosynthetic process organic substance metabolic process cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression DNA-templated transcription termination macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription organic cyclic compound metabolic process nucleic acid biosynthetic process organic substance metabolic process biosynthetic process organic cyclic compound biosynthetic process organic substance biosynthetic process metabolic process cellular process macromolecule metabolic process	-
F [auth J]	DNA-dependent RNA polymerase subunit rpo7	-	-	-
G [auth L]	Small subunit of mRNA capping enzyme	-	-	-
H [auth O]	Large subunit of mRNA capping enzyme	-	-	-
I [auth R], M [auth Q]	Virion core protein	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E [auth I]	IPR004974	RNA polymerase-associated transcription specificity factor Rap94	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
P [auth S]	SEP	Parent Component: SER RESID: AA0037 PSI-MOD : O-phospho-L-serine MOD:00046

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.