Annotations: 6RFL

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth B]	RNA_pol_Rpb2_6_3rd_2	e6rflB2	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: double psi	F: RNA_pol_Rpb2_6_3rd_2	ECOD (1.6)
A [auth B]	RNA_pol_Rpb2_6_2nd_1	e6rflB6	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Single hybrid motif	F: RNA_pol_Rpb2_6_2nd_1	ECOD (1.6)
A [auth B]	RNA_pol_Rpb2_3	e6rflB1	A: a+b complex topology	X: N-terminal domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	H: N-terminal domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	T: N-terminal domain in beta subunit of DNA dependent RNA-polymerase	F: RNA_pol_Rpb2_3	ECOD (1.6)
A [auth B]	F_UNCLASSIFIED	e6rflB5	A: a+b complex topology	X: insertion domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	H: insertion domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	T: insertion domain in beta subunit of DNA dependent RNA-polymerase	F: F_UNCLASSIFIED	ECOD (1.6)
A [auth B]	RNA_pol_Rpb2_45_1	e6rflB4	A: a+b complex topology	X: barrel domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	H: barrel domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	T: barrel domain in beta subunit of DNA dependent RNA-polymerase	F: RNA_pol_Rpb2_45_1	ECOD (1.6)
A [auth B]	RNA_pol_Rpb2_7	e6rflB3	A: a+b complex topology	X: C-terminal domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	H: C-terminal domain in beta subunit of DNA dependent RNA-polymerase (From Topology)	T: C-terminal domain in beta subunit of DNA dependent RNA-polymerase	F: RNA_pol_Rpb2_7	ECOD (1.6)
A [auth B]	F_UNCLASSIFIED	e6rflB7	A: a+b complex topology	X: inserted a+b domain in yeast RNA polymerase beta subunit (From Topology)	H: inserted a+b domain in yeast RNA polymerase beta subunit (From Topology)	T: inserted a+b domain in yeast RNA polymerase beta subunit	F: F_UNCLASSIFIED	ECOD (1.6)
F [auth J]	UNK_F_TYPE	e6rflJ1	A: alpha arrays	X: HTH	H: RPB10 (From Topology)	T: RPB10	F: UNK_F_TYPE	ECOD (1.6)
G [auth L]	Pox_mRNA-cap	e6rflL1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Pox_mRNA-cap	ECOD (1.6)
H [auth O]	EUF07538	e6rflO2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: EUF07538	ECOD (1.6)
H [auth O]	Pox_ATPase-GT_C	e6rflO4	A: a+b complex topology	X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)	H: Protein kinase/SAICAR synthase/ATP-grasp	T: ATP-grasp	F: Pox_ATPase-GT_C	ECOD (1.6)
H [auth O]	Pox_ATPase-GT_N	e6rflO3	A: a+b complex topology	X: mRNA triphosphatase CET1-related (From Topology)	H: mRNA triphosphatase CET1-related (From Topology)	T: mRNA triphosphatase CET1-related	F: Pox_ATPase-GT_N	ECOD (1.6)
H [auth O]	Methyltransf_11_3	e6rflO1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Methyltransf_11_3	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
G [auth L]	3.40.50.11680	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Poxvirus mRNA capping enzyme, small subunit	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
E [auth I]	PF03294	RNA polymerase-associated transcription specificity factor, Rap94 (Pox_Rap94)	RNA polymerase-associated transcription specificity factor, Rap94	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B]	DNA-dependent RNA polymerase subunit rpo132	-	-	-
J [auth K]	Transcription factor VETF 82kDa large subunit	-	-	-
K [auth U]	chr17.trna16-GlnTTG	-	-	-
L [auth A]	DNA-dependent RNA polymerase subunit rpo147	-	-	-
N [auth Y]	Nucleoside triphosphate phosphohydrolase-I	-	-	-
O [auth C]	DNA-directed RNA polymerase 35 kDa subunit	-	-	-
P [auth S]	DNA-directed RNA polymerase 30 kDa polypeptide	-	-	-
B [auth E]	DNA-directed RNA polymerase subunit	-	-	-
C [auth F]	DNA-directed RNA polymerase 19 kDa subunit	-	-	-
D [auth G]	DNA-dependent RNA polymerase subunit rpo18	-	-	-
E [auth I]	Putative H4L RNA polymerase-associated transcription factor RAP94	transcription regulator activity DNA-binding transcription factor activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression DNA-templated transcription termination macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription organic cyclic compound metabolic process nucleic acid biosynthetic process organic substance metabolic process cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression DNA-templated transcription termination macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription organic cyclic compound metabolic process nucleic acid biosynthetic process organic substance metabolic process biosynthetic process organic cyclic compound biosynthetic process organic substance biosynthetic process metabolic process cellular process macromolecule metabolic process	-
F [auth J]	DNA-dependent RNA polymerase subunit rpo7	-	-	-
G [auth L]	Small subunit of mRNA capping enzyme	-	-	-
H [auth O]	Large subunit of mRNA capping enzyme	-	-	-
I [auth R], M [auth Q]	Virion core protein	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E [auth I]	IPR004974	RNA polymerase-associated transcription specificity factor Rap94	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
P [auth S]	SEP	Parent Component: SER RESID: AA0037 PSI-MOD : O-phospho-L-serine MOD:00046

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.