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 6KZW | pdb_00006kzw

Crystal structure of YggS family pyridoxal phosphate-dependent enzyme PipY from Fusobacterium nucleatum

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2 FamilyHypothetical protein ybl036c 8100231 4003120 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyPLP-binding barrel 8100232 3000273 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyPLP-binding barrel 8100232 3000273 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPLP-binding barrel 8100232 3000273 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CPSIIe6kzwC1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: PSIIECOD (v295.2)
BPSIIe6kzwB1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: PSIIECOD (v295.2)
ALipocaline6kzwA1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: LipocalinECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF01168Alanine racemase, N-terminal domain (Ala_racemase_N)Alanine racemase, N-terminal domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Pyridoxal phosphate homeostasis protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR029066PLP-binding barrelHomologous Superfamily
A, B, C
IPR011078Pyridoxal phosphate homeostasis proteinFamily
A, B, C
IPR001608Alanine racemase, N-terminalDomain