6HIV | pdb_00006hiv

Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete mitoribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
PD [auth BQ]SCOP2 FamilyCyclophilin peptidylprolyl isomerase-like 8065076 4000390 SCOP2 (2022-06-29)
PD [auth BQ]SCOP2 SuperfamilyCyclophilin-like 8065077 3000168 SCOP2 (2022-06-29)
YD [auth BZ]SCOP2 FamilyCyclophilin peptidylprolyl isomerase-like 8065078 4000390 SCOP2 (2022-06-29)
YD [auth BZ]SCOP2 SuperfamilyCyclophilin-like 8065079 3000168 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth DQ]Cystatine6hivDQ01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.1)
U [auth DJ]e6hivDJ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF:ECOD (v294.1)
QA [auth CZ]PINe6hivCZ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
UA [auth Cg]Cystatine6hivCg01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.1)
BB [auth Cq]Cystatine6hivCq01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.1)
RB [auth A6]PINe6hivA61 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
TB [auth A9]PINe6hivA91 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
UB [auth AE]Cystatine6hivAE01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.1)
VB [auth AF]Cystatine6hivAF01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.1)
ZB [auth AN]PINe6hivAN1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
AC [auth AP]Cystatine6hivAP01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.1)
BC [auth AQ]PINe6hivAQ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
CC [auth AR]Cystatine6hivAR01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.1)
EC [auth AU]Cystatine6hivAU01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.1)
FC [auth AV]Cystatine6hivAV01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.1)
IC [auth AY]Cystatine6hivAY01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.1)
NC [auth Ag]Cystatine6hivAg01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.1)
OC [auth Aj]PINe6hivAj1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
BD [auth BC]PINe6hivBC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
HD [auth BI]PINe6hivBI1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
PD [auth BQ]PINe6hivBQ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
RD [auth BS]PINe6hivBS1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
WD [auth BX]PINe6hivBX1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
YD [auth BZ]PINe6hivBZ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)
AE [auth Bb]PINe6hivBb1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth DQ]PF10469AKAP7 2'5' RNA ligase-like domain (AKAP7_NLS)AKAP7 2'5' RNA ligase-like domainAKAP7_NLS is the N-terminal domain of the cyclic AMP-dependent protein kinase A, PKA, anchor protein AKAP7. This protein anchors PKA for its role in regulating PKA-mediated gene transcription in both somatic cells and oocytes [1]. AKAP7_NLS carries t ...AKAP7_NLS is the N-terminal domain of the cyclic AMP-dependent protein kinase A, PKA, anchor protein AKAP7. This protein anchors PKA for its role in regulating PKA-mediated gene transcription in both somatic cells and oocytes [1]. AKAP7_NLS carries the nuclear localisation signal (NLS) KKRKK, that indicates the cellular destiny of this anchor protein [2]. Binding to the regulatory subunits RI and RII of PKA is mediated via the family AKAP7_RIRII_bdg. at the C-terminus. This family represents a region that contains two 2'5' RNA ligase like domains Pfam:PF02834. Presumably this domain carried out some as yet unknown enzymatic function.
Domain
K [auth DS]PF14311Probable Treble clef zinc finger domain (DUF4379)Probable Treble clef zinc finger domain- Family
W [auth DT]PF00581Rhodanese-like domain (Rhodanese)Rhodanese-like domainRhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. Domain
CA [auth CE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
EA [auth CH]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
FA [auth CI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
GA [auth CJ]PF01476LysM domain (LysM)LysM domainThe LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation [1]. This domain may have a general peptidoglycan binding function. The structure of this domain is known [2]. Domain
LA [auth CP]PF09597Small ribosomal subunit protein mS41 SAM domain (SAM_Ribosomal_mS41)Small ribosomal subunit protein mS41 SAM domainThis entry represents a SAM-like domain found in fungal mitoribosome protein mS41. The mitochondrion-specific ribosomal protein mS41 family comprises proteins that are integral components of the mitochondrial ribosome, also known as the mitoribosome ...This entry represents a SAM-like domain found in fungal mitoribosome protein mS41. The mitochondrion-specific ribosomal protein mS41 family comprises proteins that are integral components of the mitochondrial ribosome, also known as the mitoribosome. These proteins play a crucial role in the dedicated translation machinery that synthesizes mitochondrial genome-encoded proteins, which include essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are tethered to the mitochondrial inner membrane, ensuring that translation products are cotranslationally integrated into the membrane. Additionally, members of the mS41 family are implicated in the regulation of telomere length, a process essential for maintaining chromosome stability and cellular lifespan. Certain members are also required for survival upon exposure to specific environmental stressors, such as the K1 killer toxin.
Domain
MA [auth CQ]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
NA [auth CR]PF02777Iron/manganese superoxide dismutases, C-terminal domain (Sod_Fe_C)Iron/manganese superoxide dismutases, C-terminal domainsuperoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplas ...superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplasmic Cu/Zn SOD, and a mitochondrial Mn/Fe SOD. C-terminal domain is a mixed alpha/beta fold.
Domain
NB [auth A2]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
UB [auth AE]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
WB [auth AI]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
YB [auth AK]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
YB [auth AK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
ZB [auth AN]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
AC [auth AP]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
CC [auth AR]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
BD [auth BC]PF00501AMP-binding enzyme (AMP-binding)AMP-binding enzyme- Family
PD [auth BQ]PF00160Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase)Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLDThe peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ...The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function [1].
Domain
WD [auth BX]PF00412LIM domain (LIM)LIM domainThis family represents two copies of the LIM structural domain. Domain
YD [auth BZ]PF00160Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase)Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLDThe peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ...The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth DA]ms48- -
B [auth DD]ms51-
C [auth DI]ms56- -
D [auth DL]ms59- -
E [auth DM]ms60- - -
F [auth DN]ms61- -
G [auth DO]ms62-
H [auth DP]ms63- -
I [auth DQ]ms64 -
J [auth DR]ms65- - -
K [auth DS]ms66- -
L [auth DU]ms68- - -
M [auth DZ]ms73- -
O [auth DB]ms49- - -
P [auth DC]ms50- - -
R [auth DF]ms53- -
S [auth DG]ms54- -
T [auth DH]ms55
U [auth DJ]ms57- -
V [auth DK]ms58- -
W [auth DT]ms67 -
X [auth DV]ms69- -
Y [auth DW]ms70- - -
Z [auth DX]ms71- -
AA [auth DY]ms72- -
BA [auth CC]uS3m- - -
CA [auth CE]uS55m
DA [auth CF]bS6m- -
EA [auth CH]uS8m
FA [auth CI]uS9m
GA [auth CJ]uS10m- -
HA [auth CK]uS11m
IA [auth CL]uS12- -
JA [auth CN]uS14m- -
KA [auth CO]uS15m- -
LA [auth CP]bS16m- -
MA [auth CQ]uS17m
NA [auth CR]bS18m
OA [auth CS]uS19m- -
PA [auth CU]bS12m- - -
QA [auth CZ]mt-IF-3- - -
RA [auth Ca]mS22- -
SA [auth Cb]mS23- -
TA [auth Cd]mS26- -
UA [auth Cg]mS29 -
VA [auth Ci]mS33- -
WA [auth Cj]mS34- -
XA [auth Ck]mS35
YA [auth Cm]mS37- -
ZA [auth Cn]mS38- -
AB [auth Cp]ms34- -
BB [auth Cq]ms42 - -
CB [auth Cr]mS43 -
DB [auth Cv]mS47-
EB [auth CA]9s rRNA---
FB [auth UO]UNK---
GB [auth UP],
WE [auth UW]
UNK---
HB [auth UQ]UNK---
IB [auth UR],
VE [auth UV],
XE [auth UX]
UNK---
JB [auth US]UNK---
KB [auth UT]UNK---
LB [auth A0]bL27m- - -
MB [auth A1]bL28m -
NB [auth A2]uL29m
OB [auth A3]uL30m- - -
PB [auth A4]bL31m- -
QB [auth A5]bL32m- -
RB [auth A6]bL33m- -
SB [auth A8]bL35m- - -
TB [auth A9]bL36m- - -
UB [auth AE]uL3m
VB [auth AF]uL4m
WB [auth AI]bL9m
XB [auth AJ]uL10m- - -
YB [auth AK]uL11m
ZB [auth AN]50S ribosomal protein L13, putative
AC [auth AP]uL15m
BC [auth AQ]50S ribosomal protein L16, putative
CC [auth AR]50S ribosomal protein L17, putative
DC [auth AT]bL19m- -
EC [auth AU]bL20m
FC [auth AV]bL21m
GC [auth AW]uL22m
HC [auth AX]uL23m
IC [auth AY]uL24m
JC [auth Ab]mL38- -
KC [auth Ad]mL40- - -
LC [auth Ae]mL41- - -
MC [auth Af]mL42- -
NC [auth Ag]mL43
OC [auth Aj]mL46 -
PC [auth Al]mL49- -
QC [auth Ao]mL52- -
RC [auth Ap]mL53- -
SC [auth At]mL63- - -
TC [auth Av]mL68- -
UC [auth AB]bL12m---
VC [auth AC],
WC [auth AD]
bL12m---
XC [auth AG]bL12m---
YC [auth AA]12S rRNA---
ZC [auth BA]mL67- - -
AD [auth BB]mL68- -
BD [auth BC]mL69
CD [auth BD]mL70- - -
DD [auth BE]mL71- -
ED [auth BF]mL72- - -
FD [auth BG]mL73- -
GD [auth BH]mL74- -
HD [auth BI]mL75
ID [auth BJ]mL76- -
JD [auth BK]mL77- - -
KD [auth BL]mL78- - -
LD [auth BM]mL79- -
MD [auth BN]mL80- -
ND [auth BO]mL81- - -
OD [auth BP]mL82- - -
PD [auth BQ]mL83
QD [auth BR]mL84- -
RD [auth BS]mL85- -
SD [auth BT]mL86- - -
TD [auth BU]mL87- - -
UD [auth BV]mL88- - -
VD [auth BW]mL89-
WD [auth BX]mL90 - -
XD [auth BY]mS91- -
YD [auth BZ]mL92
ZD [auth Ba]mL93- - -
AE [auth Bb]mL94- -
BE [auth Bc]mL95- -
CE [auth Bd]mL96- - -
DE [auth Be]mL97- -
EE [auth Bf]mL98- -
FE [auth Bg]mL99-
GE [auth Bh]mL100- - -
HE [auth UA]UNK---
IE [auth UB]UNK---
JE [auth UC],
OE [auth UH]
UNK---
KE [auth UD]UNK---
LE [auth UE]UNK---
ME [auth UF],
NE [auth UG],
TE [auth UN]
UNK---
PE [auth UI]UNK---
QE [auth UK]UNK---
RE [auth UL]UNK---
SE [auth UM]UNK---
UE [auth UU]UNK---
Q [auth DE]mS52
N [auth Da]ms74- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth DD]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
E [auth DM]IPR036894Nucleoid-associated protein YbaB-like domain superfamilyHomologous Superfamily
I [auth DQ]IPR052641A-kinase anchor protein 7 isoform gammaFamily
I [auth DQ]IPR019510A-kinase anchor protein 7-like, phosphoesterase domainDomain
I [auth DQ]IPR009097Cyclic phosphodiesteraseHomologous Superfamily
K [auth DS]IPR025487Treble clef zinc finger domainDomain
L [auth DU]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
L [auth DU]IPR000626Ubiquitin-like domainDomain
S [auth DG]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
T [auth DH]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
W [auth DT]IPR001763Rhodanese-like domainDomain
W [auth DT]IPR036873Rhodanese-like domain superfamilyHomologous Superfamily
CA [auth CE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
DA [auth CF]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
EA [auth CH]IPR000630Small ribosomal subunit protein uS8Family
EA [auth CH]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
FA [auth CI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
FA [auth CI]IPR000754Small ribosomal subunit protein uS9Family
FA [auth CI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
GA [auth CJ]IPR018392LysM domainDomain
HA [auth CK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
IA [auth CL]IPR035306Small ribosomal subunit protein uS12mFamily
KA [auth CO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
MA [auth CQ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth CQ]IPR000266Small ribosomal subunit protein uS17Family
NA [auth CR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
SA [auth Cb]IPR059199Ribosomal protein S23-likeFamily
UA [auth Cg]IPR019368Small ribosomal subunit protein mS29Family
AB [auth Cp]IPR019083Small ribosomal subunit protein mS41, SAM domainDomain
AB [auth Cp]IPR039603Small ribosomal subunit protein mS41Family
BB [auth Cq]IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilyHomologous Superfamily
BB [auth Cq]IPR019832Manganese/iron superoxide dismutase, C-terminalDomain
BB [auth Cq]IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyHomologous Superfamily
CB [auth Cr]IPR019832Manganese/iron superoxide dismutase, C-terminalDomain
CB [auth Cr]IPR047002T-complex protein 10, C-terminal domain superfamilyHomologous Superfamily
CB [auth Cr]IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyHomologous Superfamily
DB [auth Cv]IPR029045ClpP/crotonase-like domain superfamilyHomologous Superfamily
DB [auth Cv]IPR045004Enoyl-CoA hydratase/isomerase domainDomain
MB [auth A1]IPR026569Large ribosomal subunit protein bL28Family
NB [auth A2]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
NB [auth A2]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
OB [auth A3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
RB [auth A6]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
UB [auth AE]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
UB [auth AE]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
UB [auth AE]IPR000597Large ribosomal subunit protein uL3Family
VB [auth AF]IPR013005Large ribosomal subunit protein uL4-likeFamily
VB [auth AF]IPR002136Large ribosomal subunit protein uL4Family
VB [auth AF]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
WB [auth AI]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
WB [auth AI]IPR000244Large ribosomal subunit protein bL9Family
YB [auth AK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
YB [auth AK]IPR000911Ribosomal protein uL11Family
YB [auth AK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
YB [auth AK]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
YB [auth AK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
ZB [auth AN]IPR005822Large ribosomal subunit protein uL13Family
ZB [auth AN]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
AC [auth AP]IPR021131Large ribosomal subunit protein uL15/eL18Domain
AC [auth AP]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
AC [auth AP]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
BC [auth AQ]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
BC [auth AQ]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
BC [auth AQ]IPR016180Large ribosomal subunit protein uL16 domainDomain
BC [auth AQ]IPR047873Large ribosomal subunit protein uL16Family
CC [auth AR]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
CC [auth AR]IPR000456Large ribosomal subunit protein bL17Family
EC [auth AU]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
EC [auth AU]IPR005813Large ribosomal subunit protein bL20Family
FC [auth AV]IPR028909Large ribosomal subunit protein bL21-likeFamily
FC [auth AV]IPR001787Large ribosomal subunit protein bL21Family
FC [auth AV]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
GC [auth AW]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
GC [auth AW]IPR001063Large ribosomal subunit protein uL22Family
GC [auth AW]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
HC [auth AX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
HC [auth AX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
HC [auth AX]IPR013025Large ribosomal subunit protein uL23-likeFamily
IC [auth AY]IPR003256Large ribosomal subunit protein uL24Family
IC [auth AY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
IC [auth AY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IC [auth AY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JC [auth Ab]IPR036610PEBP-like superfamilyHomologous Superfamily
NC [auth Ag]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
NC [auth Ag]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
NC [auth Ag]IPR039927Large ribosomal subunit protein mL43Family
OC [auth Aj]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
OC [auth Aj]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
OC [auth Aj]IPR040008Large ribosomal subunit protein mL46Family
OC [auth Aj]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
BD [auth BC]IPR042099ANL, N-terminal domainHomologous Superfamily
BD [auth BC]IPR000873AMP-dependent synthetase/ligase domainDomain
DD [auth BE]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
ED [auth BF]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
FD [auth BG]IPR029058Alpha/Beta hydrolase foldHomologous Superfamily
HD [auth BI]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
HD [auth BI]IPR002885Pentatricopeptide repeatRepeat
JD [auth BK]IPR001623DnaJ domainDomain
JD [auth BK]IPR050817DjlA DnaK co-chaperoneFamily
JD [auth BK]IPR036869Chaperone J-domain superfamilyHomologous Superfamily
PD [auth BQ]IPR029000Cyclophilin-like domain superfamilyHomologous Superfamily
PD [auth BQ]IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainDomain
WD [auth BX]IPR001781Zinc finger, LIM-typeDomain
XD [auth BY]IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
YD [auth BZ]IPR029000Cyclophilin-like domain superfamilyHomologous Superfamily
YD [auth BZ]IPR024936Cyclophilin-type peptidyl-prolyl cis-trans isomeraseFamily
YD [auth BZ]IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainDomain
AE [auth Bb]IPR036873Rhodanese-like domain superfamilyHomologous Superfamily
CE [auth Bd]IPR059194Ribosomal protein mL96-likeFamily