6HIV | pdb_00006hiv

Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete mitoribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
PD [auth BQ]SCOP2 FamilyCyclophilin peptidylprolyl isomerase-like 8065076 4000390 SCOP2 (2022-06-29)
PD [auth BQ]SCOP2 SuperfamilyCyclophilin-like 8065077 3000168 SCOP2 (2022-06-29)
YD [auth BZ]SCOP2 FamilyCyclophilin peptidylprolyl isomerase-like 8065078 4000390 SCOP2 (2022-06-29)
YD [auth BZ]SCOP2 SuperfamilyCyclophilin-like 8065079 3000168 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
U [auth DJ]e6hivDJ1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF:ECOD (v294.2)
BB [auth Cq]Cystatine6hivCq01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.2)
RB [auth A6]PINe6hivA61 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
TB [auth A9]PINe6hivA91 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
BC [auth AQ]PINe6hivAQ1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
CC [auth AR]Cystatine6hivAR01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.2)
EC [auth AU]Cystatine6hivAU01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.2)
IC [auth AY]Cystatine6hivAY01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.2)
BD [auth BC]PINe6hivBC1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
PD [auth BQ]PINe6hivBQ1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
YD [auth BZ]PINe6hivBZ1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
PC [auth Al]MIF4Ge6hivAl1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
OC [auth Aj]PINe6hivAj1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
NC [auth Ag]Cystatine6hivAg01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.2)
I [auth DQ]Cystatine6hivDQ01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.2)
FC [auth AV]Cystatine6hivAV01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.2)
AC [auth AP]Cystatine6hivAP01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.2)
ZB [auth AN]PINe6hivAN1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
VB [auth AF]Cystatine6hivAF01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.2)
UB [auth AE]Cystatine6hivAE01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.2)
QB [auth A5]MIF4Ge6hivA51 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
MB [auth A1]MIF4Ge6hivA11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
UA [auth Cg]Cystatine6hivCg01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CystatinECOD (v294.2)
QA [auth CZ]PINe6hivCZ1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
DA [auth CF]MIF4Ge6hivCF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
AE [auth Bb]PINe6hivBb1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
WD [auth BX]PINe6hivBX1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
RD [auth BS]PINe6hivBS1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
HD [auth BI]PINe6hivBI1 A: beta barrelsX: Surp module (SWAP domain)H: ADP-ribosylationT: ADP-ribosylationF: PINECOD (v294.2)
FD [auth BG]MIF4Ge6hivBG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
K [auth DS]PF14311Probable Treble clef zinc finger domain (DUF4379)Probable Treble clef zinc finger domain- Family
W [auth DT]PF00581Rhodanese-like domain (Rhodanese)Rhodanese-like domainRhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. Domain
CA [auth CE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
CC [auth AR]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
BD [auth BC]PF00501AMP-binding enzyme (AMP-binding)AMP-binding enzyme- Family
PD [auth BQ]PF00160Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase)Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLDThe peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ...The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function [1].
Domain
YD [auth BZ]PF00160Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase)Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLDThe peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ...The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function [1].
Domain
I [auth DQ]PF10469AKAP7 2'5' RNA ligase-like domain (AKAP7_NLS)AKAP7 2'5' RNA ligase-like domainAKAP7_NLS is the N-terminal domain of the cyclic AMP-dependent protein kinase A, PKA, anchor protein AKAP7. This protein anchors PKA for its role in regulating PKA-mediated gene transcription in both somatic cells and oocytes [1]. AKAP7_NLS carries t ...AKAP7_NLS is the N-terminal domain of the cyclic AMP-dependent protein kinase A, PKA, anchor protein AKAP7. This protein anchors PKA for its role in regulating PKA-mediated gene transcription in both somatic cells and oocytes [1]. AKAP7_NLS carries the nuclear localisation signal (NLS) KKRKK, that indicates the cellular destiny of this anchor protein [2]. Binding to the regulatory subunits RI and RII of PKA is mediated via the family AKAP7_RIRII_bdg. at the C-terminus. This family represents a region that contains two 2'5' RNA ligase like domains Pfam:PF02834. Presumably this domain carried out some as yet unknown enzymatic function.
Domain
AC [auth AP]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
ZB [auth AN]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
YB [auth AK]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
YB [auth AK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
WB [auth AI]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
UB [auth AE]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
NB [auth A2]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
NA [auth CR]PF02777Iron/manganese superoxide dismutases, C-terminal domain (Sod_Fe_C)Iron/manganese superoxide dismutases, C-terminal domainsuperoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplas ...superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplasmic Cu/Zn SOD, and a mitochondrial Mn/Fe SOD. C-terminal domain is a mixed alpha/beta fold.
Domain
MA [auth CQ]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
LA [auth CP]PF09597Small ribosomal subunit protein mS41 SAM domain (SAM_Ribosomal_mS41)Small ribosomal subunit protein mS41 SAM domainThis entry represents a SAM-like domain found in fungal mitoribosome protein mS41. The mitochondrion-specific ribosomal protein mS41 family comprises proteins that are integral components of the mitochondrial ribosome, also known as the mitoribosome ...This entry represents a SAM-like domain found in fungal mitoribosome protein mS41. The mitochondrion-specific ribosomal protein mS41 family comprises proteins that are integral components of the mitochondrial ribosome, also known as the mitoribosome. These proteins play a crucial role in the dedicated translation machinery that synthesizes mitochondrial genome-encoded proteins, which include essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are tethered to the mitochondrial inner membrane, ensuring that translation products are cotranslationally integrated into the membrane. Additionally, members of the mS41 family are implicated in the regulation of telomere length, a process essential for maintaining chromosome stability and cellular lifespan. Certain members are also required for survival upon exposure to specific environmental stressors, such as the K1 killer toxin.
Domain
GA [auth CJ]PF01476LysM domain (LysM)LysM domainThe LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation [1]. This domain may have a general peptidoglycan binding function. The structure of this domain is known [2]. Domain
FA [auth CI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
EA [auth CH]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
WD [auth BX]PF00412LIM domain (LIM)LIM domainThis family represents two copies of the LIM structural domain. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth DI]ms56- -
G [auth DO]ms62-
J [auth DR]ms65- - -
K [auth DS]ms66 -
O [auth DB]ms49- - -
P [auth DC]ms50- - -
U [auth DJ]ms57- -
V [auth DK]ms58- -
W [auth DT]ms67 -
X [auth DV]ms69- -
AA [auth DY]ms72- -
BA [auth CC]uS3m- - -
CA [auth CE]uS55m
IA [auth CL]uS12- -
WA [auth Cj]mS34- -
YA [auth Cm]mS37- -
ZA [auth Cn]mS38- -
BB [auth Cq]ms42 - -
DB [auth Cv]mS47
FB [auth UO]UNK---
GB [auth UP],
WE [auth UW]
UNK---
RB [auth A6]bL33m- -
TB [auth A9]bL36m - -
XB [auth AJ]uL10m- - -
BC [auth AQ]50S ribosomal protein L16, putative
CC [auth AR]50S ribosomal protein L17, putative
DC [auth AT]bL19m- -
EC [auth AU]bL20m
IC [auth AY]uL24m
KC [auth Ad]mL40- - -
QC [auth Ao]mL52- -
RC [auth Ap]mL53- -
AD [auth BB]mL68- -
BD [auth BC]mL69
CD [auth BD]mL70- - -
ED [auth BF]mL72- - -
GD [auth BH]mL74- -
ID [auth BJ]mL76- -
LD [auth BM]mL79- -
PD [auth BQ]mL83
YD [auth BZ]mL92
GE [auth Bh]mL100 - -
RE [auth UL]UNK---
UC [auth AB]bL12m---
TC [auth Av]mL68 -
SC [auth At]mL63- - -
PC [auth Al]mL49- -
OC [auth Aj]mL46 -
NC [auth Ag]mL43
MC [auth Af]mL42- -
LC [auth Ae]mL41- - -
I [auth DQ]ms64 -
JC [auth Ab]mL38- -
HC [auth AX]uL23m
GC [auth AW]uL22m
FC [auth AV]bL21m
H [auth DP]ms63- -
AC [auth AP]uL15m
ZB [auth AN]50S ribosomal protein L13, putative
YB [auth AK]uL11m
WB [auth AI]bL9m
VB [auth AF]uL4m
UB [auth AE]uL3m
SB [auth A8]bL35m - -
QB [auth A5]bL32m -
PB [auth A4]bL31m- -
OB [auth A3]uL30m- - -
NB [auth A2]uL29m
MB [auth A1]bL28m -
LB [auth A0]bL27m- - -
KB [auth UT]UNK---
JB [auth US]UNK---
IB [auth UR],
VE [auth UV],
XE [auth UX]
UNK---
HB [auth UQ]UNK---
F [auth DN]ms61- -
EB [auth CA]9s rRNA---
CB [auth Cr]mS43 -
AB [auth Cp]ms34- -
XA [auth Ck]mS35
E [auth DM]ms60- - -
VA [auth Ci]mS33- -
UA [auth Cg]mS29 -
TA [auth Cd]mS26- -
SA [auth Cb]mS23- -
RA [auth Ca]mS22- -
QA [auth CZ]mt-IF-3- - -
PA [auth CU]bS12m- - -
OA [auth CS]uS19m- -
NA [auth CR]bS18m
D [auth DL]ms59- -
MA [auth CQ]uS17m
LA [auth CP]bS16m- -
KA [auth CO]uS15m- -
JA [auth CN]uS14m- -
HA [auth CK]uS11m
GA [auth CJ]uS10m- -
FA [auth CI]uS9m
EA [auth CH]uS8m
DA [auth CF]bS6m- -
Z [auth DX]ms71- -
Y [auth DW]ms70- - -
T [auth DH]ms55
B [auth DD]ms51-
S [auth DG]ms54- -
R [auth DF]ms53- -
Q [auth DE]mS52
UE [auth UU]UNK---
SE [auth UM]UNK---
QE [auth UK]UNK---
PE [auth UI]UNK---
ME [auth UF],
NE [auth UG],
TE [auth UN]
UNK---
LE [auth UE]UNK---
KE [auth UD]UNK---
N [auth Da]ms74 - -
JE [auth UC],
OE [auth UH]
UNK---
IE [auth UB]UNK---
HE [auth UA]UNK---
FE [auth Bg]mL99-
EE [auth Bf]mL98- -
DE [auth Be]mL97 -
CE [auth Bd]mL96- - -
BE [auth Bc]mL95- -
AE [auth Bb]mL94- -
M [auth DZ]ms73- -
ZD [auth Ba]mL93- - -
XD [auth BY]mS91- -
WD [auth BX]mL90 - -
VD [auth BW]mL89-
UD [auth BV]mL88- - -
TD [auth BU]mL87- - -
SD [auth BT]mL86- - -
RD [auth BS]mL85- -
QD [auth BR]mL84- -
L [auth DU]ms68- - -
OD [auth BP]mL82- - -
ND [auth BO]mL81- - -
MD [auth BN]mL80- -
KD [auth BL]mL78- - -
JD [auth BK]mL77- - -
HD [auth BI]mL75
FD [auth BG]mL73- -
DD [auth BE]mL71- -
ZC [auth BA]mL67- - -
YC [auth AA]12S rRNA---
XC [auth AG]bL12m---
VC [auth AC],
WC [auth AD]
bL12m---
A [auth DA]ms48 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
K [auth DS]IPR025487Treble clef zinc finger domainDomain
W [auth DT]IPR001763Rhodanese-like domainDomain
W [auth DT]IPR036873Rhodanese-like domain superfamilyHomologous Superfamily
CA [auth CE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
IA [auth CL]IPR035306Small ribosomal subunit protein uS12mFamily
BB [auth Cq]IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilyHomologous Superfamily
BB [auth Cq]IPR019832Manganese/iron superoxide dismutase, C-terminalDomain
BB [auth Cq]IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyHomologous Superfamily
DB [auth Cv]IPR029045ClpP/crotonase-like domain superfamilyHomologous Superfamily
DB [auth Cv]IPR045004Enoyl-CoA hydratase/isomerase domainDomain
RB [auth A6]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BC [auth AQ]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
BC [auth AQ]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
BC [auth AQ]IPR016180Large ribosomal subunit protein uL16 domainDomain
BC [auth AQ]IPR047873Large ribosomal subunit protein uL16Family
CC [auth AR]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
CC [auth AR]IPR000456Large ribosomal subunit protein bL17Family
EC [auth AU]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
EC [auth AU]IPR005813Large ribosomal subunit protein bL20Family
IC [auth AY]IPR003256Large ribosomal subunit protein uL24Family
IC [auth AY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
IC [auth AY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IC [auth AY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BD [auth BC]IPR042099ANL, N-terminal domainHomologous Superfamily
BD [auth BC]IPR000873AMP-dependent synthetase/ligase domainDomain
ED [auth BF]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
PD [auth BQ]IPR029000Cyclophilin-like domain superfamilyHomologous Superfamily
PD [auth BQ]IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainDomain
YD [auth BZ]IPR029000Cyclophilin-like domain superfamilyHomologous Superfamily
YD [auth BZ]IPR024936Cyclophilin-type peptidyl-prolyl cis-trans isomeraseFamily
YD [auth BZ]IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainDomain
OC [auth Aj]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
OC [auth Aj]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
OC [auth Aj]IPR040008Large ribosomal subunit protein mL46Family
OC [auth Aj]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
NC [auth Ag]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
NC [auth Ag]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
NC [auth Ag]IPR039927Large ribosomal subunit protein mL43Family
I [auth DQ]IPR052641A-kinase anchor protein 7 isoform gammaFamily
I [auth DQ]IPR019510A-kinase anchor protein 7-like, phosphoesterase domainDomain
I [auth DQ]IPR009097Cyclic phosphodiesteraseHomologous Superfamily
JC [auth Ab]IPR036610PEBP-like superfamilyHomologous Superfamily
HC [auth AX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
HC [auth AX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
HC [auth AX]IPR013025Large ribosomal subunit protein uL23-likeFamily
GC [auth AW]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
GC [auth AW]IPR001063Large ribosomal subunit protein uL22Family
GC [auth AW]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
FC [auth AV]IPR028909Large ribosomal subunit protein bL21-likeFamily
FC [auth AV]IPR001787Large ribosomal subunit protein bL21Family
FC [auth AV]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
AC [auth AP]IPR021131Large ribosomal subunit protein uL15/eL18Domain
AC [auth AP]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
AC [auth AP]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
ZB [auth AN]IPR005822Large ribosomal subunit protein uL13Family
ZB [auth AN]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
YB [auth AK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
YB [auth AK]IPR000911Ribosomal protein uL11Family
YB [auth AK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
YB [auth AK]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
YB [auth AK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
WB [auth AI]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
WB [auth AI]IPR000244Large ribosomal subunit protein bL9Family
VB [auth AF]IPR013005Large ribosomal subunit protein uL4-likeFamily
VB [auth AF]IPR002136Large ribosomal subunit protein uL4Family
VB [auth AF]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
UB [auth AE]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
UB [auth AE]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
UB [auth AE]IPR000597Large ribosomal subunit protein uL3Family
OB [auth A3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
NB [auth A2]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
NB [auth A2]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
MB [auth A1]IPR026569Large ribosomal subunit protein bL28Family
CB [auth Cr]IPR019832Manganese/iron superoxide dismutase, C-terminalDomain
CB [auth Cr]IPR047002T-complex protein 10, C-terminal domain superfamilyHomologous Superfamily
CB [auth Cr]IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyHomologous Superfamily
AB [auth Cp]IPR019083Small ribosomal subunit protein mS41, SAM domainDomain
AB [auth Cp]IPR039603Small ribosomal subunit protein mS41Family
E [auth DM]IPR036894Nucleoid-associated protein YbaB-like domain superfamilyHomologous Superfamily
UA [auth Cg]IPR019368Small ribosomal subunit protein mS29Family
SA [auth Cb]IPR059199Ribosomal protein S23-likeFamily
NA [auth CR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
MA [auth CQ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth CQ]IPR000266Small ribosomal subunit protein uS17Family
KA [auth CO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
HA [auth CK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
GA [auth CJ]IPR018392LysM domainDomain
FA [auth CI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
FA [auth CI]IPR000754Small ribosomal subunit protein uS9Family
FA [auth CI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
EA [auth CH]IPR000630Small ribosomal subunit protein uS8Family
EA [auth CH]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
DA [auth CF]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
T [auth DH]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
B [auth DD]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
S [auth DG]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
CE [auth Bd]IPR059194Ribosomal protein mL96-likeFamily
AE [auth Bb]IPR036873Rhodanese-like domain superfamilyHomologous Superfamily
XD [auth BY]IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
WD [auth BX]IPR001781Zinc finger, LIM-typeDomain
L [auth DU]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
L [auth DU]IPR000626Ubiquitin-like domainDomain
JD [auth BK]IPR001623DnaJ domainDomain
JD [auth BK]IPR050817DjlA DnaK co-chaperoneFamily
JD [auth BK]IPR036869Chaperone J-domain superfamilyHomologous Superfamily
HD [auth BI]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
HD [auth BI]IPR002885Pentatricopeptide repeatRepeat
FD [auth BG]IPR029058Alpha/Beta hydrolase foldHomologous Superfamily
DD [auth BE]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily