Crystal structure of Enterococcus faecium D63r Penicillin-Binding protein 5 (PBP5fm)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | PDEase_I | e6g0kC1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: PDEase_I | ECOD (develop294) |
| B | PRK | e6g0kB1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: PRK | ECOD (develop294) |
| A | PDEase_I | e6g0kA1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: PDEase_I | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.10.450.100 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (utative) |
| C | 3.40.710.10 | Alpha Beta | 3-Layer(aba) Sandwich | Beta-lactamase | DD-peptidase/beta-lactamase superfamily | CATH (utative) |
| B | 3.10.450.100 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (utative) |
| B | 3.40.710.10 | Alpha Beta | 3-Layer(aba) Sandwich | Beta-lactamase | DD-peptidase/beta-lactamase superfamily | CATH (utative) |
| A | 3.10.450.100 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (utative) |
| A | 3.40.710.10 | Alpha Beta | 3-Layer(aba) Sandwich | Beta-lactamase | DD-peptidase/beta-lactamase superfamily | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR032710 | NTF2-like domain superfamily | Homologous Superfamily | |
| IPR012338 | Beta-lactamase/transpeptidase-like | Homologous Superfamily | |
| IPR005311 | Penicillin-binding protein, dimerisation domain | Domain | |
| IPR001460 | Penicillin-binding protein, transpeptidase | Domain | |
| IPR007887 | Penicillin-binding protein 3-like, N-terminal domain | Domain | |
| IPR050515 | Class D beta-lactamase/transpeptidase | Family | |
| IPR036138 | Penicillin-binding protein, dimerisation domain superfamily | Homologous Superfamily |














