6DJ9
Structure of the USP15 DUSP domain in complex with a high-affinity Ubiquitin Variant (UbV)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | DUSP-like | 8032908 | 3001970 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | DUSP-like | 8032908 | 3001970 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | DUSP-like | 8032908 | 3001970 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | DUSP-like | 8032908 | 3001970 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | DUSP-like | 8032908 | 3001970 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | DUSP-like | 8032908 | 3001970 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF06337 | e6dj9A1 | A: a+b complex topology | X: DUSP, domain in ubiquitin-specific proteases (From Topology) | H: DUSP, domain in ubiquitin-specific proteases (From Topology) | T: DUSP, domain in ubiquitin-specific proteases | F: PF06337 | ECOD (1.6) |
B | PF06337 | e6dj9B1 | A: a+b complex topology | X: DUSP, domain in ubiquitin-specific proteases (From Topology) | H: DUSP, domain in ubiquitin-specific proteases (From Topology) | T: DUSP, domain in ubiquitin-specific proteases | F: PF06337 | ECOD (1.6) |
C | PF06337 | e6dj9C1 | A: a+b complex topology | X: DUSP, domain in ubiquitin-specific proteases (From Topology) | H: DUSP, domain in ubiquitin-specific proteases (From Topology) | T: DUSP, domain in ubiquitin-specific proteases | F: PF06337 | ECOD (1.6) |
D | PF06337 | e6dj9D1 | A: a+b complex topology | X: DUSP, domain in ubiquitin-specific proteases (From Topology) | H: DUSP, domain in ubiquitin-specific proteases (From Topology) | T: DUSP, domain in ubiquitin-specific proteases | F: PF06337 | ECOD (1.6) |
E | PF06337 | e6dj9E1 | A: a+b complex topology | X: DUSP, domain in ubiquitin-specific proteases (From Topology) | H: DUSP, domain in ubiquitin-specific proteases (From Topology) | T: DUSP, domain in ubiquitin-specific proteases | F: PF06337 | ECOD (1.6) |
F | PF06337 | e6dj9F1 | A: a+b complex topology | X: DUSP, domain in ubiquitin-specific proteases (From Topology) | H: DUSP, domain in ubiquitin-specific proteases (From Topology) | T: DUSP, domain in ubiquitin-specific proteases | F: PF06337 | ECOD (1.6) |
G | PF00240 | e6dj9G1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF00240 | ECOD (1.6) |
H | PF00240 | e6dj9H1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF00240 | ECOD (1.6) |
I | PF00240 | e6dj9I1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF00240 | ECOD (1.6) |
J | PF00240 | e6dj9J1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF00240 | ECOD (1.6) |
K | PF00240 | e6dj9K1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF00240 | ECOD (1.6) |
L | PF00240 | e6dj9L1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF00240 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF06337 | DUSP domain (DUSP) | DUSP domain | The DUSP (domain present in ubiquitin-specific protease) domain is found at the N-terminus of Ubiquitin-specific proteases. The structure of this domain has been solved [1]. Its tripod-like structure consists of a 3-fold alpha-helical bundle supporti ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR028889 | Ubiquitin specific protease domain | Domain | |
IPR018200 | Ubiquitin specific protease, conserved site | Conserved Site | |
IPR006615 | Peptidase C19, ubiquitin-specific peptidase, DUSP domain | Domain | |
IPR013792 | RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta | Homologous Superfamily | |
IPR038765 | Papain-like cysteine peptidase superfamily | Homologous Superfamily | |
IPR029346 | Ubiquitin carboxyl-terminal hydrolase, C-terminal | Domain | |
IPR028135 | Ubiquitin-like domain, USP-type | Domain | |
IPR035927 | DUSP-like superfamily | Homologous Superfamily | |
IPR001394 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |