CryoEM structure of mouse PCDH15-1EC-LHFPL5 complex
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Cel124_C | e6c14B1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: ADP-ribosylation | T: ADP-ribosylation | F: Cel124_C | ECOD (v294.1) |
| D | Anoctamin | e6c14D1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: gp11/gp12 receptor-binding domain | T: gp11/gp12 receptor-binding domain | F: Anoctamin | ECOD (v294.1) |
| A | FN-plug_TEN1-4 | e6c14A01 | A: a/b three-layered sandwiches | X: Rossmann-like | H: P-loop domains-related | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: FN-plug_TEN1-4 | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF10242 | Lipoma HMGIC fusion partner-like protein (L_HMGIC_fpl) | Lipoma HMGIC fusion partner-like protein | - | Family | |
| PF00028 | Cadherin domain (Cadherin) | Cadherin domain | Domain | ||
| PF23206 | PCDH15-like domain (PCDH15_12th) | PCDH15-like domain | This domain is found in human Protocadherin-15 (PCDH15), a calcium-dependent cell-adhesion protein that is essential for maintenance of normal retinal and cochlear function. This domain is predicted to adopt an alpha-beta configuration. It is found C ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR019372 | Lipoma HMGIC fusion partner-like protein | Family | |
| IPR015919 | Cadherin-like superfamily | Homologous Superfamily | |
| IPR056989 | Protocadherin-15 domain | Domain | |
| IPR020894 | Cadherin conserved site | Conserved Site | |
| IPR030718 | Extracellular cadherin domain superfamily | Homologous Superfamily | |
| IPR050971 | Cadherin domain-containing protein | Family | |
| IPR041149 | Extracellular cadherin domain | Domain | |
| IPR002126 | Cadherin-like | Domain |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Tetraspan junctional complexes | Lipoma HMGIC fusion partner-like protein |














