6B9Q

Single particle cryo-EM structure determination of the LuIII capsid protein


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BA [auth 2]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
BB [auth v]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
CA [auth 3]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
DB [auth x]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
EA [auth 5]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
FA [auth 6]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
FB [auth z]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
GA [auth a]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
GB [auth 7]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
HB [auth 8]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
IA [auth c]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
JA [auth d]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
LA [auth f]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
RA [auth l]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
SA [auth m]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
AA [auth 1]SCOP2 FamilyParvovirinae-like VP8073278 4003479 SCOP2 (2022-06-29)
AA [auth 1]SCOP2 SuperfamilyssDNA viruses8073279 3000931 SCOP2 (2022-06-29)
AB [auth u]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
CB [auth w]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
DA [auth 4]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
EB [auth y]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
HA [auth b]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
KA [auth e]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
MA [auth g]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
NA [auth h]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
OA [auth i]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
PA [auth j]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
QA [auth k]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
TA [auth n]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
USCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
UA [auth o]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
VA [auth p]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
WA [auth q]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
XA [auth r]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
YA [auth s]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)
ZA [auth t]SCOP2B SuperfamilyssDNA viruses8073279 3000931 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BA [auth 2]PF00740e6b9q21 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
BB [auth v]PF00740e6b9qv1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
CPF00740e6b9qC1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
CA [auth 3]PF00740e6b9q31 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
DPF00740e6b9qD1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
DB [auth x]PF00740e6b9qx1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
EA [auth 5]PF00740e6b9q51 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
FA [auth 6]PF00740e6b9q61 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
FB [auth z]PF00740e6b9qz1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
GA [auth a]PF00740e6b9qa1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
GB [auth 7]PF00740e6b9q71 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
HB [auth 8]PF00740e6b9q81 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
IPF00740e6b9qI1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
IA [auth c]PF00740e6b9qc1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
JA [auth d]PF00740e6b9qd1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
LA [auth f]PF00740e6b9qf1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
MPF00740e6b9qM1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
NPF00740e6b9qN1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
QPF00740e6b9qQ1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
RPF00740e6b9qR1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
RA [auth l]PF00740e6b9ql1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
SPF00740e6b9qS1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
SA [auth m]PF00740e6b9qm1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
VPF00740e6b9qV1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
YPF00740e6b9qY1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
APF00740e6b9qA1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
AA [auth 1]PF00740e6b9q11 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
AB [auth u]PF00740e6b9qu1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
BPF00740e6b9qB1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
CB [auth w]PF00740e6b9qw1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
DA [auth 4]PF00740e6b9q41 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
EPF00740e6b9qE1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
EB [auth y]PF00740e6b9qy1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
FPF00740e6b9qF1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
GPF00740e6b9qG1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
HPF00740e6b9qH1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
HA [auth b]PF00740e6b9qb1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
JPF00740e6b9qJ1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
KPF00740e6b9qK1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
KA [auth e]PF00740e6b9qe1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
LPF00740e6b9qL1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
MA [auth g]PF00740e6b9qg1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
NA [auth h]PF00740e6b9qh1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
OPF00740e6b9qO1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
OA [auth i]PF00740e6b9qi1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
PPF00740e6b9qP1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
PA [auth j]PF00740e6b9qj1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
QA [auth k]PF00740e6b9qk1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
TPF00740e6b9qT1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
TA [auth n]PF00740e6b9qn1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
UPF00740e6b9qU1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
UA [auth o]PF00740e6b9qo1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
VA [auth p]PF00740e6b9qp1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
WPF00740e6b9qW1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
WA [auth q]PF00740e6b9qq1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
XPF00740e6b9qX1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
XA [auth r]PF00740e6b9qr1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
YA [auth s]PF00740e6b9qs1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
ZPF00740e6b9qZ1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)
ZA [auth t]PF00740e6b9qt1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00740ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Capsid protein VP2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013607Phospholipase A2-like domainDomain
IPR016184Capsid/spike protein, ssDNA virusHomologous Superfamily
IPR036952Parvovirus coat protein VP1/VP2Homologous Superfamily
IPR001403Parvovirus coat protein VP2Domain