6ANU
Cryo-EM structure of F-actin complexed with the beta-III-spectrin actin-binding domain
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth F] | PF00022 | e6anuF2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
E [auth D] | PF00022 | e6anuD1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
B [auth A] | PF00022 | e6anuA2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
C [auth B] | PF00022 | e6anuB1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
D [auth C] | PF00022 | e6anuC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
F [auth E] | PF00022 | e6anuE1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
G [auth f] | PF00307 | e6anuf1 | A: alpha bundles | X: CH domain-like | H: Calponin-homology domain-like (From Topology) | T: Calponin-homology domain-like | F: PF00307 | ECOD (1.6) |
J [auth c] | PF00307 | e6anuc1 | A: alpha bundles | X: CH domain-like | H: Calponin-homology domain-like (From Topology) | T: Calponin-homology domain-like | F: PF00307 | ECOD (1.6) |
K [auth d] | PF00307 | e6anud1 | A: alpha bundles | X: CH domain-like | H: Calponin-homology domain-like (From Topology) | T: Calponin-homology domain-like | F: PF00307 | ECOD (1.6) |
H [auth a] | PF00307 | e6anua1 | A: alpha bundles | X: CH domain-like | H: Calponin-homology domain-like (From Topology) | T: Calponin-homology domain-like | F: PF00307 | ECOD (1.6) |
I [auth b] | PF00307 | e6anub1 | A: alpha bundles | X: CH domain-like | H: Calponin-homology domain-like (From Topology) | T: Calponin-homology domain-like | F: PF00307 | ECOD (1.6) |
L [auth e] | PF00307 | e6anue1 | A: alpha bundles | X: CH domain-like | H: Calponin-homology domain-like (From Topology) | T: Calponin-homology domain-like | F: PF00307 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00022 | Actin (Actin) | Actin | - | Family | |
PF00307 | Calponin homology (CH) domain (CH) | Calponin homology (CH) domain | The CH domain is found in both cytoskeletal proteins and signal transduction proteins [1]. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its ac ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020902 | Actin/actin-like conserved site | Conserved Site | |
IPR004001 | Actin, conserved site | Conserved Site | |
IPR043129 | ATPase, nucleotide binding domain | Homologous Superfamily | |
IPR004000 | Actin family | Family | |
IPR001849 | Pleckstrin homology domain | Domain | |
IPR001605 | Pleckstrin homology domain, spectrin-type | Domain | |
IPR041681 | Pleckstrin homology domain 9 | Domain | |
IPR001715 | Calponin homology domain | Domain | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR001589 | Actinin-type actin-binding domain, conserved site | Conserved Site | |
IPR036872 | CH domain superfamily | Homologous Superfamily | |
IPR018159 | Spectrin/alpha-actinin | Repeat | |
IPR016343 | Spectrin, beta subunit | Family | |
IPR002017 | Spectrin repeat | Repeat |