Crystal structure of transcription factor from Listeria monocytogenes
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth A] | d6abta1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | automated matches | automated matches | (Listeria monocytogenes ) [TaxId: 1639 ], | SCOPe (2.08) |
| B [auth A] | d6abta2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Listeria monocytogenes ) [TaxId: 1639 ], | SCOPe (2.08) |
| A [auth B] | d6abtb1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | automated matches | automated matches | (Listeria monocytogenes ) [TaxId: 1639 ], | SCOPe (2.08) |
| A [auth B] | d6abtb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Listeria monocytogenes ) [TaxId: 1639 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth A] | Sigma70_r2,Sigma70_ner | e6abtA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma70_r2,Sigma70_ner | ECOD (v294.1) |
| A [auth B] | Sigma70_r2,Sigma70_ner | e6abtB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma70_r2,Sigma70_ner | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B [auth A] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (utative) |
| A [auth B] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (utative) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth B], B [auth A] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
| A [auth B], B [auth A] | IPR005149 | Transcription regulator PadR, N-terminal | Domain |
| A [auth B], B [auth A] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
| A [auth B], B [auth A] | IPR052509 | Metal-responsive DNA-binding regulator | Family |
