6ABT
Crystal structure of transcription factor from Listeria monocytogenes
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d6abtb1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | automated matches | automated matches | (Listeria monocytogenes ) [TaxId: 1639 ], | SCOPe (2.08) |
A [auth B] | d6abtb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Listeria monocytogenes ) [TaxId: 1639 ], | SCOPe (2.08) |
B [auth A] | d6abta1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | automated matches | automated matches | (Listeria monocytogenes ) [TaxId: 1639 ], | SCOPe (2.08) |
B [auth A] | d6abta2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Listeria monocytogenes ) [TaxId: 1639 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF03551 | e6abtB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF03551 | ECOD (1.6) |
B [auth A] | PF03551 | e6abtA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF03551 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (utative) |
B [auth A] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF03551 | Transcriptional regulator PadR-like family (PadR) | Transcriptional regulator PadR-like family | Members of this family are transcriptional regulators that appear to be related to the Pfam:PF01047 family. This family includes PadR Swiss:Q9EXE6 a protein that is involved in negative regulation of phenolic acid metabolism. | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR005149 | Transcription regulator PadR, N-terminal | Domain |
A [auth B], B [auth A] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |