Structure of high-light grown Chlorella ohadii photosystem I
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| H [auth J] | SCOP2 Family | Subunit IX of photosystem I reaction centre, PsaJ | 8104042 | 4002101 | SCOP2 (2022-06-29) |
| H [auth J] | SCOP2 Superfamily | Subunit IX of photosystem I reaction centre, PsaJ | 8104043 | 3000824 | SCOP2 (2022-06-29) |
| F | SCOP2 Family | Subunit III of photosystem I reaction centre, PsaF | 8103804 | 4002091 | SCOP2 (2022-06-29) |
| F | SCOP2 Superfamily | Subunit III of photosystem I reaction centre, PsaF | 8103805 | 3000813 | SCOP2 (2022-06-29) |
| E | SCOP2B Superfamily | Electron transport accessory proteins | 8103817 | 3000325 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Photosystem I subunit PsaD | 8103795 | 3000951 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | 4Fe-4S ferredoxins | 8104039 | 3000020 | SCOP2B (2022-06-29) |
| W [auth 9] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8103797 | 3000343 | SCOP2B (2022-06-29) |
| V [auth 2] | SCOP2 Family | Chlorophyll a-b binding protein | 8103798 | 4001763 | SCOP2 (2022-06-29) |
| V [auth 2] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8103799 | 3000343 | SCOP2 (2022-06-29) |
| U [auth 8] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8103813 | 3000343 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8104041 | 3000850 | SCOP2B (2022-06-29) |
| T [auth 7] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8103809 | 3000343 | SCOP2B (2022-06-29) |
| S [auth 6] | SCOP2 Family | Chlorophyll a-b binding protein | 8103800 | 4001763 | SCOP2 (2022-06-29) |
| S [auth 6] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8103801 | 3000343 | SCOP2 (2022-06-29) |
| R [auth 5] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8103815 | 3000343 | SCOP2B (2022-06-29) |
| Q [auth 4] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8103807 | 3000343 | SCOP2B (2022-06-29) |
| O [auth a] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8103811 | 3000343 | SCOP2B (2022-06-29) |
| N [auth 1] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8103811 | 3000343 | SCOP2B (2022-06-29) |
| M [auth L] | SCOP2B Superfamily | Photosystem I reaction center subunit XI, PsaL | 8103793 | 3000870 | SCOP2B (2022-06-29) |
| L [auth H] | SCOP2B Superfamily | Photosystem I reaction centre subunit VI | 8103803 | 3002733 | SCOP2B (2022-06-29) |
| K [auth I] | SCOP2B Superfamily | Subunit VIII of photosystem I reaction centre, PsaI | 8104037 | 3000819 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8104045 | 3000850 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth K] | Trypsin | e6zzyK1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| H [auth J] | Trypsin | e6zzyJ1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| G | Trypsin | e6zzyG1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| F | Trypsin | e6zzyF1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| E | Trypsin | e6zzyE1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| D | Trypsin | e6zzyD1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| C | Trypsin | e6zzyC1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| W [auth 9] | Trypsin | e6zzy91 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| U [auth 8] | Trypsin | e6zzy81 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| B | Trypsin | e6zzyB1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| T [auth 7] | Trypsin | e6zzy71 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| S [auth 6] | Glyco_transf_41 | e6zzy61 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Glyco_transf_41 | ECOD (v294.1) |
| R [auth 5] | Glyco_transf_41 | e6zzy51 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Glyco_transf_41 | ECOD (v294.1) |
| Q [auth 4] | Trypsin | e6zzy41 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| P [auth 3] | Trypsin | e6zzy31 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| O [auth a] | Trypsin | e6zzya1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| N [auth 1] | Trypsin | e6zzy11 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| M [auth L] | Trypsin | e6zzyL1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| L [auth H] | Trypsin | e6zzyH1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| K [auth I] | Trypsin | e6zzyI1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| J [auth M] | Trypsin | e6zzyM1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
| A | Trypsin | e6zzyA1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| W [auth 9] | 1.10.3460.10 | Mainly Alpha | Orthogonal Bundle | Chlorophyll a-b binding protein | Chlorophyll a/b binding protein domain | CATH (utative) |
| R [auth 5] | 1.10.3460.10 | Mainly Alpha | Orthogonal Bundle | Chlorophyll a-b binding protein | Chlorophyll a/b binding protein domain | CATH (utative) |
| M [auth L] | 1.20.1240.10 | Mainly Alpha | Up-down Bundle | Photosystem 1 Reaction Centre Subunit Xi | Chain: L | CATH (utative) |














