6ZR7 | pdb_00006zr7

X-ray structure of human Dscam Ig7-Ig9

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth AAA]	Glycos_transf_3	e6zr7AAA1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Glycos_transf_3	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth AAA]	PF13927	Immunoglobulin domain (Ig_3)	Immunoglobulin domain	This family contains immunoglobulin-like domains.	Domain
A [auth AAA]	PF07679	Immunoglobulin I-set domain (I-set)	Immunoglobulin I-set domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AAA]	Down syndrome cell adhesion molecule	cell adhesion molecule binding protein binding binding cell adhesion mediator activity cell-cell adhesion mediator activity signaling receptor binding netrin receptor binding protein tyrosine kinase binding kinase binding enzyme binding protein kinase binding	behavior multicellular organismal process locomotory behavior developmental process multicellular organism development central nervous system development anatomical structure development nervous system development system development axon extension positive regulation of nervous system development positive regulation of locomotion regulation of growth regulation of cellular process behavior multicellular organismal process locomotory behavior developmental process multicellular organism development central nervous system development anatomical structure development nervous system development system development axon extension positive regulation of nervous system development positive regulation of locomotion regulation of growth regulation of cellular process axonogenesis regulation of cellular component size response to stimulus developmental growth cell projection organization regulation of cell differentiation regulation of neurogenesis neuron projection development positive regulation of chemotaxis regulation of cell development positive regulation of axon extension involved in axon guidance positive regulation of developmental process cell projection morphogenesis neuron differentiation neuron projection morphogenesis taxis cell differentiation positive regulation of cell projection organization regulation of biological quality positive regulation of developmental growth chemotaxis regulation of biological process regulation of cell projection organization positive regulation of cell development response to external stimulus developmental growth involved in morphogenesis generation of neurons regulation of response to stimulus response to chemical regulation of locomotion positive regulation of multicellular organismal process regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cellular developmental process regulation of developmental process regulation of response to external stimulus plasma membrane bounded cell projection morphogenesis positive regulation of biological process cell development cell growth cell morphogenesis regulation of axon extension cellular component organization regulation of nervous system development positive regulation of response to stimulus neurogenesis regulation of axon extension involved in axon guidance regulation of extent of cell growth positive regulation of response to external stimulus positive regulation of cell differentiation regulation of axonogenesis positive regulation of neurogenesis regulation of multicellular organismal process cellular component organization or biogenesis axon extension involved in axon guidance positive regulation of axon extension positive regulation of cellular process positive regulation of axonogenesis regulation of anatomical structure morphogenesis locomotion regulation of cell size neuron projection extension regulation of multicellular organismal development regulation of developmental growth plasma membrane bounded cell projection organization developmental cell growth biological regulation growth axon guidance positive regulation of cell growth axon development regulation of chemotaxis regulation of cell growth cell morphogenesis involved in neuron differentiation anatomical structure morphogenesis positive regulation of growth neuron projection guidance neuron development cellular process regulation of plasma membrane bounded cell projection organization regulation of anatomical structure size sensory organ development photoreceptor cell differentiation visual system development retina development in camera-type eye neural retina development eye morphogenesis eye photoreceptor cell differentiation animal organ morphogenesis sensory system development camera-type eye morphogenesis eye development animal organ development camera-type eye photoreceptor cell differentiation retina morphogenesis in camera-type eye sensory organ morphogenesis camera-type eye development dendrite development dendrite morphogenesis post-embryonic retina morphogenesis in camera-type eye post-embryonic animal morphogenesis post-embryonic development neuron recognition dendrite self-avoidance cell recognition dendritic spine development cell adhesion biological process involved in intraspecies interaction between organisms social behavior cell-cell adhesion homophilic cell-cell adhesion positive regulation of phosphorylation positive regulation of phosphorus metabolic process phosphorylation positive regulation of phosphate metabolic process positive regulation of metabolic process phosphate-containing compound metabolic process metabolic process regulation of phosphorus metabolic process regulation of phosphorylation phosphorus metabolic process regulation of metabolic process retina layer formation anatomical structure formation involved in morphogenesis cellular component biogenesis cell junction organization cellular component assembly cell junction assembly synapse organization synapse assembly trans-synaptic signaling signaling synaptic transmission, glutamatergic cell-cell signaling chemical synaptic transmission cell communication synaptic signaling anterograde trans-synaptic signaling regulation of cell adhesion negative regulation of cellular process negative regulation of biological process negative regulation of cell adhesion	cellular anatomical structure membrane cell periphery plasma membrane somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection growth cone axon distal axon site of polarized growth cellular anatomical structure membrane cell periphery plasma membrane somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection growth cone axon distal axon site of polarized growth extracellular region synapse cell junction cell body neuronal cell body

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AAA]	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
A [auth AAA]	IPR003598	Immunoglobulin subtype 2	Domain
A [auth AAA]	IPR056754	DSCAM/DSCAML, C-terminal domain	Domain
A [auth AAA]	IPR013106	Immunoglobulin V-set domain	Domain
A [auth AAA]	IPR003599	Immunoglobulin domain subtype	Domain
A [auth AAA]	IPR013098	Immunoglobulin I-set	Domain
A [auth AAA]	IPR003961	Fibronectin type III	Domain
A [auth AAA]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A [auth AAA]	IPR007110	Immunoglobulin-like domain	Domain
A [auth AAA]	IPR036116	Fibronectin type III superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth AAA]	Pharos: O60469	Down syndrome Hepatomegaly ovarian cancer substance-related disorder astrocytic tumor bipolar disorder intellectual disability malignant ependymoma oligodendroglioma pilocytic astrocytoma psoriasis substance dependence atypical teratoid rhabdoid tumor brain aneurysm drug dependence Down syndrome Hepatomegaly ovarian cancer substance-related disorder astrocytic tumor bipolar disorder intellectual disability malignant ependymoma oligodendroglioma pilocytic astrocytoma psoriasis substance dependence atypical teratoid rhabdoid tumor brain aneurysm drug dependence DYRK1A-related intellectual disability syndrome large cell medulloblastoma medulloblastoma pituitary cancer substance abuse tuberculosis autism spectrum disorder lung carcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.