6ZQI | pdb_00006zqi

Cryo-EM structure of Spondweni virus prME


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BFlavi_propepe6zqiB1 A: beta sandwichesX: HSP40/DnaJ peptide-binding domain (From Topology)H: HSP40/DnaJ peptide-binding domain (From Topology)T: HSP40/DnaJ peptide-binding domainF: Flavi_propepECOD (1.6)
CFlavi_Me6zqiC1 A: extended segmentsX: Small envelope protein M (From Topology)H: Small envelope protein M (From Topology)T: Small envelope protein MF: Flavi_MECOD (1.6)
AFlavi_glycop_Ce6zqiA3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Flavi_glycop_CECOD (1.6)
AFlavi_glycoprote6zqiA2 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Flavi_glycoprotECOD (1.6)
Aflavi_E_steme6zqiA1 A: alpha arraysX: Transmembrane domain of envelope protein E (From Topology)H: Transmembrane domain of envelope protein E (From Topology)T: Transmembrane domain of envelope protein EF: flavi_E_stemECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.260.50 Mainly Beta Sandwich HSP40/DNAj peptide-binding domain Flavivirus polyprotein propeptide domainCATH (utative)
A2.60.40.350 Mainly Beta Sandwich Immunoglobulin-like CATH (utative)