Annotations: 6ZNI

Structure of the Shigella MxiH needle filament attached to the basal body

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
W	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
W	RNA_pol_Rpb1_5	e6zniW1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
V	RNA_pol_Rpb1_5	e6zniV1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
U	RNA_pol_Rpb1_5	e6zniU1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
T	RNA_pol_Rpb1_5	e6zniT1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
S	RNA_pol_Rpb1_5	e6zniS1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
R	RNA_pol_Rpb1_5	e6zniR1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
Q	RNA_pol_Rpb1_5	e6zniQ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
P	RNA_pol_Rpb1_5	e6zniP1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
O	RNA_pol_Rpb1_5	e6zniO1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
N	RNA_pol_Rpb1_5	e6zniN1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
M	RNA_pol_Rpb1_5	e6zniM1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
L	RNA_pol_Rpb1_5	e6zniL1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
K	RNA_pol_Rpb1_5	e6zniK1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
J	RNA_pol_Rpb1_5	e6zniJ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
I	RNA_pol_Rpb1_5	e6zniI1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
H	RNA_pol_Rpb1_5	e6zniH1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
G	RNA_pol_Rpb1_5	e6zniG1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
F	RNA_pol_Rpb1_5	e6zniF1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
E	RNA_pol_Rpb1_5	e6zniE1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
D	RNA_pol_Rpb1_5	e6zniD1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
C	RNA_pol_Rpb1_5	e6zniC1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
B	RNA_pol_Rpb1_5	e6zniB1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
A	RNA_pol_Rpb1_5	e6zniA1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W	PF09392	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F)	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W	Protein MxiH	identical protein binding protein binding binding	establishment of protein localization transport secretion protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport macromolecule localization establishment of protein localization transport secretion protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport macromolecule localization cellular process intracellular protein localization	cell surface cellular anatomical structure extracellular region protein-containing complex type III protein secretion system complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W	IPR037203	Type III secretion, needle-protein-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W	IPR021123	Type III secretion, needle-protein-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W	IPR011841	Type III secretion system, needle protein	Family