6ZLG | pdb_00006zlg

Folding of an iron binding peptide in response to sedimentation is resolved using ferritin as a nano-reactor

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
X [auth Z]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
W [auth Y]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
V [auth X]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
U [auth W]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
T [auth V]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
S [auth U]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
R [auth T]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
Q [auth S]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
P [auth R]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
O [auth Q]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
N [auth P]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
M [auth O]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
L [auth N]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
K [auth M]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
J [auth L]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
I [auth K]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
H [auth J]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
G [auth I]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X [auth Z]	RNA_pol_Rpb1_5	e6zlgZ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
W [auth Y]	RNA_pol_Rpb1_5	e6zlgY1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
V [auth X]	RNA_pol_Rpb1_5	e6zlgX1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
U [auth W]	RNA_pol_Rpb1_5	e6zlgW1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
T [auth V]	RNA_pol_Rpb1_5	e6zlgV1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
S [auth U]	RNA_pol_Rpb1_5	e6zlgU1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
R [auth T]	RNA_pol_Rpb1_5	e6zlgT1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
Q [auth S]	RNA_pol_Rpb1_5	e6zlgS1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
P [auth R]	RNA_pol_Rpb1_5	e6zlgR1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
O [auth Q]	RNA_pol_Rpb1_5	e6zlgQ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
N [auth P]	RNA_pol_Rpb1_5	e6zlgP1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
M [auth O]	RNA_pol_Rpb1_5	e6zlgO1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
L [auth N]	RNA_pol_Rpb1_5	e6zlgN1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
K [auth M]	RNA_pol_Rpb1_5	e6zlgM1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
J [auth L]	RNA_pol_Rpb1_5	e6zlgL1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
I [auth K]	RNA_pol_Rpb1_5	e6zlgK1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
H [auth J]	RNA_pol_Rpb1_5	e6zlgJ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
G [auth I]	RNA_pol_Rpb1_5	e6zlgI1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
F	RNA_pol_Rpb1_5	e6zlgF1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
E	RNA_pol_Rpb1_5	e6zlgE1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
D	RNA_pol_Rpb1_5	e6zlgD1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
C	RNA_pol_Rpb1_5	e6zlgC1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
B	RNA_pol_Rpb1_5	e6zlgB1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)
A	RNA_pol_Rpb1_5	e6zlgA1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpb1_5	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E, A, B, C, D, E, F, G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth X], W [auth Y], X [auth Z]	PF00210	Ferritin-like domain (Ferritin)	Ferritin-like domain	This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E, A, B, C, D, E, F, G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth X], W [auth Y], X [auth Z]	Ferritin	cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding ferric iron binding identical protein binding protein binding	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport monoatomic ion transport monoatomic cation transport establishment of localization metal ion transport	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle vacuole autophagosome cytoplasm intracellular membrane-bounded organelle extracellular region autolysosome lytic vacuole secondary lysosome lysosome membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle vacuole autophagosome cytoplasm intracellular membrane-bounded organelle extracellular region autolysosome lytic vacuole secondary lysosome lysosome ferritin complex protein-containing complex intracellular vesicle membrane-enclosed lumen intracellular organelle lumen cytoplasmic vesicle organelle lumen endocytic vesicle lumen vesicle endocytic vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E, A, B, C, D, E, F, G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth X], W [auth Y], X [auth Z]	IPR009040	Ferritin-like diiron domain	Domain
A, B, C, D, E, A, B, C, D, E, F, G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth X], W [auth Y], X [auth Z]	IPR012347	Ferritin-like	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F, G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth X], W [auth Y], X [auth Z]	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F, G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth X], W [auth Y], X [auth Z]	IPR008331	Ferritin/DPS domain	Domain
A, B, C, D, E, A, B, C, D, E, F, G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth X], W [auth Y], X [auth Z]	IPR001519	Ferritin	Family
A, B, C, D, E, A, B, C, D, E, F, G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth X], W [auth Y], X [auth Z]	IPR014034	Ferritin, conserved site	Conserved Site