6ZH5 | pdb_00006zh5

Folding of an iron binding peptide in response to sedimentation is resolved using ferritin as a nano-reactor

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d6zh5c1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
C	d6zh5c2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
I [auth K]	d6zh5k1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
I [auth K]	d6zh5k2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
J [auth L]	d6zh5l1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
J [auth L]	d6zh5l2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
M [auth O]	d6zh5o1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
M [auth O]	d6zh5o2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
U [auth W]	d6zh5w1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
U [auth W]	d6zh5w2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
X [auth F]	d6zh5f1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
X [auth F]	d6zh5f2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
W [auth D]	d6zh5d1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
W [auth D]	d6zh5d2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
V [auth B]	d6zh5b1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
V [auth B]	d6zh5b2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
T [auth V]	d6zh5v1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
T [auth V]	d6zh5v2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
S [auth U]	d6zh5u1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
S [auth U]	d6zh5u2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
R [auth T]	d6zh5t1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
R [auth T]	d6zh5t2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
Q [auth S]	d6zh5s1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
Q [auth S]	d6zh5s2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
P [auth R]	d6zh5r1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
P [auth R]	d6zh5r2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
O [auth Q]	d6zh5q1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
O [auth Q]	d6zh5q2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
N [auth P]	d6zh5p1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
N [auth P]	d6zh5p2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
L [auth N]	d6zh5n1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
L [auth N]	d6zh5n2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
K [auth M]	d6zh5m1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
K [auth M]	d6zh5m2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
H [auth J]	d6zh5j1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
H [auth J]	d6zh5j2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
G [auth I]	d6zh5i1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
G [auth I]	d6zh5i2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
F [auth H]	d6zh5h1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
F [auth H]	d6zh5h2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
E [auth G]	d6zh5g1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
E [auth G]	d6zh5g2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
D [auth E]	d6zh5e1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
D [auth E]	d6zh5e2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
B [auth A]	d6zh5a1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
B [auth A]	d6zh5a2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
A [auth Z]	d6zh5z1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
A [auth Z]	d6zh5z2	Artifacts	Tags	Tags	Tags	C-terminal Tags	House mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
I [auth K]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
J [auth L]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
M [auth O]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
U [auth W]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
X [auth F]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
W [auth D]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
V [auth B]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
T [auth V]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
S [auth U]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
R [auth T]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
Q [auth S]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
P [auth R]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
O [auth Q]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
N [auth P]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
L [auth N]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
K [auth M]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
H [auth J]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
G [auth I]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
F [auth H]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
E [auth G]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
D [auth E]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)
A [auth Z]	SCOP2B Superfamily	Ferritin-like	8033038	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	e6zh5C1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
I [auth K]	e6zh5K1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
J [auth L]	e6zh5L1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
M [auth O]	e6zh5O1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
U [auth W]	e6zh5W1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
X [auth F]	e6zh5F1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
W [auth D]	e6zh5D1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
V [auth B]	e6zh5B1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
T [auth V]	e6zh5V1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
S [auth U]	e6zh5U1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
R [auth T]	e6zh5T1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
Q [auth S]	e6zh5S1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
P [auth R]	e6zh5R1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
O [auth Q]	e6zh5Q1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
N [auth P]	e6zh5P1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
L [auth N]	e6zh5N1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
K [auth M]	e6zh5M1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
H [auth J]	e6zh5J1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
G [auth I]	e6zh5I1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
F [auth H]	e6zh5H1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
E [auth G]	e6zh5G1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
D [auth E]	e6zh5E1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
B [auth A]	e6zh5A1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Herpes_MCP	F:	ECOD (20:10:01)
A [auth Z]	e6zh5Z1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Pro_isomerase	F:	ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth Z], B [auth A], C, D [auth E], E [auth G], A [auth Z], B [auth A], C, D [auth E], E [auth G], F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth B], W [auth D], X [auth F]	PF00210	Ferritin-like domain (Ferritin)	Ferritin-like domain	This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth Z], B [auth A], C, D [auth E], E [auth G], A [auth Z], B [auth A], C, D [auth E], E [auth G], F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth B], W [auth D], X [auth F]	Ferritin	cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding ferric iron binding identical protein binding protein binding	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport monoatomic ion transport monoatomic cation transport establishment of localization metal ion transport	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle vacuole autophagosome cytoplasm intracellular membrane-bounded organelle extracellular region autolysosome lytic vacuole secondary lysosome lysosome membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle vacuole autophagosome cytoplasm intracellular membrane-bounded organelle extracellular region autolysosome lytic vacuole secondary lysosome lysosome ferritin complex protein-containing complex intracellular vesicle membrane-enclosed lumen intracellular organelle lumen cytoplasmic vesicle organelle lumen endocytic vesicle lumen vesicle endocytic vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth Z], B [auth A], C, D [auth E], E [auth G], A [auth Z], B [auth A], C, D [auth E], E [auth G], F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth B], W [auth D], X [auth F]	IPR009040	Ferritin-like diiron domain	Domain
A [auth Z], B [auth A], C, D [auth E], E [auth G], A [auth Z], B [auth A], C, D [auth E], E [auth G], F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth B], W [auth D], X [auth F]	IPR012347	Ferritin-like	Homologous Superfamily
A [auth Z], B [auth A], C, D [auth E], E [auth G], A [auth Z], B [auth A], C, D [auth E], E [auth G], F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth B], W [auth D], X [auth F]	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A [auth Z], B [auth A], C, D [auth E], E [auth G], A [auth Z], B [auth A], C, D [auth E], E [auth G], F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth B], W [auth D], X [auth F]	IPR008331	Ferritin/DPS domain	Domain
A [auth Z], B [auth A], C, D [auth E], E [auth G], A [auth Z], B [auth A], C, D [auth E], E [auth G], F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth B], W [auth D], X [auth F]	IPR001519	Ferritin	Family
A [auth Z], B [auth A], C, D [auth E], E [auth G], A [auth Z], B [auth A], C, D [auth E], E [auth G], F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N], M [auth O], N [auth P], O [auth Q], P [auth R], Q [auth S], R [auth T], S [auth U], T [auth V], U [auth W], V [auth B], W [auth D], X [auth F]	IPR014034	Ferritin, conserved site	Conserved Site