6ZCG | pdb_00006zcg

Amyloid fibril morphology ii (in vitro) from murine SAA1.1 protein

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth L]	WD40	e6zcgL1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
B [auth O]	WD40	e6zcgO1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
C [auth I]	WD40	e6zcgI1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
D [auth N]	WD40	e6zcgN1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
F [auth K]	WD40	e6zcgK1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
J [auth G]	WD40	e6zcgG1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
L [auth F]	WD40	e6zcgF1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
M [auth C]	WD40	e6zcgC1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
O [auth P]	WD40	e6zcgP1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
P [auth S]	WD40	e6zcgS1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
Q [auth M]	WD40	e6zcgM1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
R	WD40	e6zcgR1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
S [auth T]	WD40	e6zcgT1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
T [auth W]	WD40	e6zcgW1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
U [auth Q]	WD40	e6zcgQ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
W [auth X]	WD40	e6zcgX1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
X [auth U]	WD40	e6zcgU1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
V	WD40	e6zcgV1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
N [auth B]	WD40	e6zcgB1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
K [auth A]	WD40	e6zcgA1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
I [auth D]	WD40	e6zcgD1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
H [auth J]	WD40	e6zcgJ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
G [auth E]	WD40	e6zcgE1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
E [auth H]	WD40	e6zcgH1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth L], B [auth O], C [auth I], D [auth N], E [auth H], A [auth L], B [auth O], C [auth I], D [auth N], E [auth H], F [auth K], G [auth E], H [auth J], I [auth D], J [auth G], K [auth A], L [auth F], M [auth C], N [auth B], O [auth P], P [auth S], Q [auth M], R, S [auth T], T [auth W], U [auth Q], V, W [auth X], X [auth U]	PF00277	Serum amyloid A protein (SAA)	Serum amyloid A protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth L], B [auth O], C [auth I], D [auth N], E [auth H], A [auth L], B [auth O], C [auth I], D [auth N], E [auth H], F [auth K], G [auth E], H [auth J], I [auth D], J [auth G], K [auth A], L [auth F], M [auth C], N [auth B], O [auth P], P [auth S], Q [auth M], R, S [auth T], T [auth W], U [auth Q], V, W [auth X], X [auth U]	Serum amyloid A-2 protein	protein binding binding signaling receptor binding G protein-coupled receptor binding	response to stimulus response to chemical response to stilbenoid acute-phase response defense response response to stress inflammatory response acute inflammatory response	polymeric cytoskeletal fiber intracellular anatomical structure intracellular membraneless organelle cytoplasmic microtubule intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle cytoplasm supramolecular fiber microtubule supramolecular polymer supramolecular complex polymeric cytoskeletal fiber intracellular anatomical structure intracellular membraneless organelle cytoplasmic microtubule intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle cytoplasm supramolecular fiber microtubule supramolecular polymer supramolecular complex microtubule cytoskeleton protein-containing complex extracellular region plasma lipoprotein particle high-density lipoprotein particle extracellular protein-containing complex lipoprotein particle protein-lipid complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth L], B [auth O], C [auth I], D [auth N], E [auth H], A [auth L], B [auth O], C [auth I], D [auth N], E [auth H], F [auth K], G [auth E], H [auth J], I [auth D], J [auth G], K [auth A], L [auth F], M [auth C], N [auth B], O [auth P], P [auth S], Q [auth M], R, S [auth T], T [auth W], U [auth Q], V, W [auth X], X [auth U]	IPR000096	Serum amyloid A protein	Family
A [auth L], B [auth O], C [auth I], D [auth N], E [auth H], A [auth L], B [auth O], C [auth I], D [auth N], E [auth H], F [auth K], G [auth E], H [auth J], I [auth D], J [auth G], K [auth A], L [auth F], M [auth C], N [auth B], O [auth P], P [auth S], Q [auth M], R, S [auth T], T [auth W], U [auth Q], V, W [auth X], X [auth U]	IPR052464	Synovial Proliferation Regulator	Family