6Z3M | pdb_00006z3m

Repulsive Guidance Molecule B (RGMB) in complex with Growth Differentiation Factor 5 (GDF5) and Neogenin 1 (NEO1).

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Cystine-knot cytokines	8070313	3000846	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Cystine-knot cytokines	8070313	3000846	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Cystine-knot cytokines	8070313	3000846	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Cystine-knot cytokines	8070313	3000846	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Cystine-knot cytokines	8070313	3000846	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Cystine-knot cytokines	8070313	3000846	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	RGM family, N-terminal helical domain	8107356	3002873	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	RGM family, N-terminal helical domain	8107356	3002873	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	RGM family, N-terminal helical domain	8107356	3002873	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	RGM family, N-terminal helical domain	8107356	3002873	SCOP2B (2022-06-29)
T [auth d]	SCOP2B Superfamily	von Willebrand factor type D domain-like	8107357	3002872	SCOP2B (2022-06-29)
X [auth p]	SCOP2B Superfamily	von Willebrand factor type D domain-like	8107357	3002872	SCOP2B (2022-06-29)
W [auth o]	SCOP2B Superfamily	von Willebrand factor type D domain-like	8107357	3002872	SCOP2B (2022-06-29)
V [auth j]	SCOP2B Superfamily	von Willebrand factor type D domain-like	8107357	3002872	SCOP2B (2022-06-29)
U [auth i]	SCOP2B Superfamily	von Willebrand factor type D domain-like	8107357	3002872	SCOP2B (2022-06-29)
S [auth c]	SCOP2B Superfamily	von Willebrand factor type D domain-like	8107357	3002872	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	RGM family, N-terminal helical domain	8107356	3002873	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	RGM family, N-terminal helical domain	8107356	3002873	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	TGF_beta	e6z3mB1	A: few secondary structure elements	X: Cystine-knot cytokines (From Topology)	H: Cystine-knot cytokines (From Topology)	T: Cystine-knot cytokines	F: TGF_beta	ECOD (1.6)
G	TGF_beta	e6z3mG1	A: few secondary structure elements	X: Cystine-knot cytokines (From Topology)	H: Cystine-knot cytokines (From Topology)	T: Cystine-knot cytokines	F: TGF_beta	ECOD (1.6)
M	TGF_beta	e6z3mM1	A: few secondary structure elements	X: Cystine-knot cytokines (From Topology)	H: Cystine-knot cytokines (From Topology)	T: Cystine-knot cytokines	F: TGF_beta	ECOD (1.6)
N	TGF_beta	e6z3mN1	A: few secondary structure elements	X: Cystine-knot cytokines (From Topology)	H: Cystine-knot cytokines (From Topology)	T: Cystine-knot cytokines	F: TGF_beta	ECOD (1.6)
H	TGF_beta	e6z3mH1	A: few secondary structure elements	X: Cystine-knot cytokines (From Topology)	H: Cystine-knot cytokines (From Topology)	T: Cystine-knot cytokines	F: TGF_beta	ECOD (1.6)
A	TGF_beta	e6z3mA1	A: few secondary structure elements	X: Cystine-knot cytokines (From Topology)	H: Cystine-knot cytokines (From Topology)	T: Cystine-knot cytokines	F: TGF_beta	ECOD (1.6)
F	fn3	e6z3mF2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3	ECOD (1.6)
F	fn3_6	e6z3mF1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3_6	ECOD (1.6)
K	fn3	e6z3mK2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3	ECOD (1.6)
K	fn3_6	e6z3mK1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3_6	ECOD (1.6)
L	fn3	e6z3mL1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3	ECOD (1.6)
L	fn3_6	e6z3mL2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3_6	ECOD (1.6)
R	fn3	e6z3mR1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3	ECOD (1.6)
R	fn3_6	e6z3mR2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3_6	ECOD (1.6)
Q	fn3	e6z3mQ1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3	ECOD (1.6)
Q	fn3_6	e6z3mQ2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3_6	ECOD (1.6)
E	fn3	e6z3mE2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3	ECOD (1.6)
E	fn3_6	e6z3mE1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3_6	ECOD (1.6)
I	RGM_N_N	e6z3mI1	A: alpha bundles	X: Spectrin repeat-like	H: Repulsive guidance molecule (RGM) N-terminal domain (From Topology)	T: Repulsive guidance molecule (RGM) N-terminal domain	F: RGM_N_N	ECOD (1.6)
J	RGM_N_N	e6z3mJ1	A: alpha bundles	X: Spectrin repeat-like	H: Repulsive guidance molecule (RGM) N-terminal domain (From Topology)	T: Repulsive guidance molecule (RGM) N-terminal domain	F: RGM_N_N	ECOD (1.6)
O	RGM_N_N	e6z3mO1	A: alpha bundles	X: Spectrin repeat-like	H: Repulsive guidance molecule (RGM) N-terminal domain (From Topology)	T: Repulsive guidance molecule (RGM) N-terminal domain	F: RGM_N_N	ECOD (1.6)
P	RGM_N_N	e6z3mP1	A: alpha bundles	X: Spectrin repeat-like	H: Repulsive guidance molecule (RGM) N-terminal domain (From Topology)	T: Repulsive guidance molecule (RGM) N-terminal domain	F: RGM_N_N	ECOD (1.6)
T [auth d]	RGM_N_C	e6z3md1	A: beta barrels	X: Repulsive guidance molecule (RGM) family (From Topology)	H: Repulsive guidance molecule (RGM) family (From Topology)	T: Repulsive guidance molecule (RGM) family	F: RGM_N_C	ECOD (1.6)
X [auth p]	RGM_N_C	e6z3mp1	A: beta barrels	X: Repulsive guidance molecule (RGM) family (From Topology)	H: Repulsive guidance molecule (RGM) family (From Topology)	T: Repulsive guidance molecule (RGM) family	F: RGM_N_C	ECOD (1.6)
W [auth o]	RGM_N_C	e6z3mo1	A: beta barrels	X: Repulsive guidance molecule (RGM) family (From Topology)	H: Repulsive guidance molecule (RGM) family (From Topology)	T: Repulsive guidance molecule (RGM) family	F: RGM_N_C	ECOD (1.6)
V [auth j]	RGM_N_C	e6z3mj1	A: beta barrels	X: Repulsive guidance molecule (RGM) family (From Topology)	H: Repulsive guidance molecule (RGM) family (From Topology)	T: Repulsive guidance molecule (RGM) family	F: RGM_N_C	ECOD (1.6)
U [auth i]	RGM_N_C	e6z3mi1	A: beta barrels	X: Repulsive guidance molecule (RGM) family (From Topology)	H: Repulsive guidance molecule (RGM) family (From Topology)	T: Repulsive guidance molecule (RGM) family	F: RGM_N_C	ECOD (1.6)
S [auth c]	RGM_N_C	e6z3mc1	A: beta barrels	X: Repulsive guidance molecule (RGM) family (From Topology)	H: Repulsive guidance molecule (RGM) family (From Topology)	T: Repulsive guidance molecule (RGM) family	F: RGM_N_C	ECOD (1.6)
D	RGM_N_N	e6z3mD1	A: alpha bundles	X: Spectrin repeat-like	H: Repulsive guidance molecule (RGM) N-terminal domain (From Topology)	T: Repulsive guidance molecule (RGM) N-terminal domain	F: RGM_N_N	ECOD (1.6)
C	RGM_N_N	e6z3mC1	A: alpha bundles	X: Spectrin repeat-like	H: Repulsive guidance molecule (RGM) N-terminal domain (From Topology)	T: Repulsive guidance molecule (RGM) N-terminal domain	F: RGM_N_N	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, G, H, M A, B, G, H, M, N	PF00019	Transforming growth factor beta like domain (TGF_beta)	Transforming growth factor beta like domain		Domain
E, F, K, L, Q E, F, K, L, Q, R	PF00041	Fibronectin type III domain (fn3)	Fibronectin type III domain		Domain
AA [auth U], BA [auth V], C, CA [auth W], D, AA [auth U], BA [auth V], C, CA [auth W], D, DA [auth X], I, J, O, P, S [auth c], T [auth d], U [auth i], V [auth j], W [auth o], X [auth p], Y [auth S], Z [auth T]	PF06535	Repulsive guidance molecule (RGM) N-terminal domain (RGM_N)	Repulsive guidance molecule (RGM) N-terminal domain	This entry represents the small N-terminal three helical bundle domain found at the N-terminus of proteins in the Repulsive Guidance Molecule (RGM) family, which is involved in various functions related to nervous system development and signaling. Me ...	This entry represents the small N-terminal three helical bundle domain found at the N-terminus of proteins in the Repulsive Guidance Molecule (RGM) family, which is involved in various functions related to nervous system development and signaling. Members of this family act as bone morphogenetic protein (BMP) coreceptors, enhancing BMP signaling pathways. They play crucial roles in regulating neural tube closure, inhibiting neurite outgrowth, and promoting neuronal adhesion. Additionally, they are involved in the regulation of iron homeostasis through the modulation of hepcidin expression. The RGM family also influences axon guidance and synapse formation, contributing to the patterning of the developing nervous system.	Domain
AA [auth U], BA [auth V], C, CA [auth W], D, AA [auth U], BA [auth V], C, CA [auth W], D, DA [auth X], I, J, O, P, S [auth c], T [auth d], U [auth i], V [auth j], W [auth o], X [auth p], Y [auth S], Z [auth T]	PF06534	Repulsive guidance molecule (RGM) C-terminal domain (RGM_C)	Repulsive guidance molecule (RGM) C-terminal domain	This entry represents the C-terminal VWD like domain found at the C-terminus of proteins in the Repulsive Guidance Molecule (RGM) family, which is involved in various functions related to nervous system development and signaling. Members of this fami ...	This entry represents the C-terminal VWD like domain found at the C-terminus of proteins in the Repulsive Guidance Molecule (RGM) family, which is involved in various functions related to nervous system development and signaling. Members of this family act as bone morphogenetic protein (BMP) coreceptors, enhancing BMP signaling pathways. They play crucial roles in regulating neural tube closure, inhibiting neurite outgrowth, and promoting neuronal adhesion. Additionally, they are involved in the regulation of iron homeostasis through the modulation of hepcidin expression. The RGM family also influences axon guidance and synapse formation, contributing to the patterning of the developing nervous system.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, G, H, M A, B, G, H, M, N	Growth/differentiation factor 5	protein binding binding molecular function activator activity signaling receptor binding molecular function regulator activity signaling receptor regulator activity growth factor activity receptor ligand activity signaling receptor activator activity BMP binding cytokine binding cytokine activity identical protein binding	cellular response to stimulus positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette cellular response to stimulus positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction enzyme-linked receptor protein signaling pathway positive regulation of cellular process regulation of biological process regulation of signaling cell surface receptor signaling pathway biological regulation positive regulation of intracellular signal transduction positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway SMAD protein signal transduction regulation of response to stimulus regulation of cell communication cellular process regulation of SMAD protein signal transduction positive regulation of SMAD protein signal transduction positive regulation of signaling cellular response to BMP stimulus cellular response to growth factor stimulus response to endogenous stimulus cellular response to endogenous stimulus response to BMP transforming growth factor beta receptor superfamily signaling pathway response to growth factor BMP signaling pathway developmental process multicellular organismal process cellular developmental process connective tissue development animal organ development tissue development chondroblast differentiation multicellular organism development skeletal system development cell differentiation anatomical structure development cartilage development system development cell-cell signaling regulation of cartilage development regulation of chondrocyte differentiation regulation of developmental process regulation of cell differentiation positive regulation of chondrocyte differentiation positive regulation of developmental process positive regulation of cell differentiation regulation of multicellular organismal process regulation of multicellular organismal development chondrocyte differentiation positive regulation of multicellular organismal process positive regulation of cartilage development neuron apoptotic process negative regulation of neuron apoptotic process negative regulation of programmed cell death regulation of apoptotic process negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death regulation of neuron apoptotic process limb development appendage development embryonic limb morphogenesis embryonic morphogenesis embryonic appendage morphogenesis embryo development anatomical structure morphogenesis appendage morphogenesis limb morphogenesis regulation of multicellular organism growth regulation of growth regulation of developmental growth developmental growth growth multicellular organism growth ossification tissue remodeling bone remodeling ossification involved in bone remodeling positive regulation of BMP signaling pathway regulation of BMP signaling pathway regulation of cellular response to growth factor stimulus response to mechanical stimulus response to abiotic stimulus response to external stimulus positive regulation of neuron differentiation neurogenesis neuron differentiation nervous system development generation of neurons regulation of neuron differentiation negative regulation of mesenchymal cell apoptotic process mesenchymal cell apoptotic process regulation of mesenchymal cell apoptotic process forelimb morphogenesis negative regulation of cartilage development negative regulation of chondrocyte differentiation negative regulation of cell differentiation negative regulation of developmental process negative regulation of multicellular organismal process negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation regulation of epithelial cell proliferation epithelial cell proliferation negative regulation of epithelial cell proliferation hindlimb morphogenesis cellular response to transforming growth factor beta stimulus response to transforming growth factor beta transforming growth factor beta receptor signaling pathway	cell periphery cellular anatomical structure plasma membrane membrane extracellular region extracellular space
E, F, K, L, Q E, F, K, L, Q, R	Neogenin	molecular transducer activity signaling receptor activity protein binding binding BMP receptor binding receptor serine/threonine kinase binding signaling receptor binding transmembrane receptor protein serine/threonine kinase binding cell adhesion molecule binding cadherin binding co-receptor binding	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis negative regulation of protein transport regulation of localization establishment of protein localization nitrogen compound transport intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis negative regulation of protein transport regulation of localization establishment of protein localization nitrogen compound transport regulation of cellular process regulation of protein localization transport negative regulation of biological process negative regulation of transport protein localization to extracellular region localization regulation of secretion by cell secretion by cell negative regulation of secretion negative regulation of cellular process negative regulation of secretion by cell intracellular protein localization negative regulation of protein localization regulation of biological process regulation of transport secretion biological regulation regulation of establishment of protein localization establishment of protein localization to extracellular region negative regulation of establishment of protein localization export from cell regulation of protein transport protein secretion establishment of localization regulation of protein secretion regulation of secretion negative regulation of protein secretion protein transport macromolecule localization cellular process multicellular organismal-level iron ion homeostasis multicellular organismal process multicellular organismal-level homeostasis multicellular organismal-level chemical homeostasis trans-synaptic signaling regulation of signaling trans-synaptic signaling, modulating synaptic transmission signaling modulation of chemical synaptic transmission cell-cell signaling cell communication chemical synaptic transmission synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of cell communication cellular response to stimulus positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway positive regulation of signal transduction cellular response to growth factor stimulus response to stimulus regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of biological process regulation of signal transduction positive regulation of BMP signaling pathway positive regulation of response to stimulus cellular response to endogenous stimulus signal transduction BMP signaling pathway enzyme-linked receptor protein signaling pathway positive regulation of cellular process cellular response to BMP stimulus cell surface receptor signaling pathway regulation of BMP signaling pathway response to endogenous stimulus regulation of cellular response to growth factor stimulus positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway response to BMP regulation of response to stimulus transforming growth factor beta receptor superfamily signaling pathway response to growth factor positive regulation of signaling cell projection organization regulation of cellular response to stress negative regulation of neuron projection regeneration neuron projection development regeneration neuron projection regeneration multicellular organism development neuron differentiation cell differentiation anatomical structure development response to wounding system development developmental process regulation of axon regeneration negative regulation of cellular component organization regulation of cell projection organization response to external stimulus nervous system development generation of neurons negative regulation of response to external stimulus regulation of neuron projection regeneration negative regulation of axon regeneration regulation of neuron projection development regulation of cellular component organization regulation of developmental process cellular developmental process regulation of response to external stimulus cell development response to axon injury regulation of response to wounding cellular component organization neurogenesis cellular response to stress axon regeneration regulation of response to stress response to stress cellular component organization or biogenesis negative regulation of cell projection organization plasma membrane bounded cell projection organization negative regulation of response to stimulus negative regulation of developmental process negative regulation of response to wounding axon development negative regulation of neuron projection development neuron development regulation of plasma membrane bounded cell projection organization RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process cell adhesion myoblast fusion cell-cell fusion muscle cell differentiation myotube differentiation muscle structure development syncytium formation by plasma membrane fusion anatomical structure morphogenesis anatomical structure formation involved in morphogenesis syncytium formation striated muscle cell differentiation	postsynaptic specialization membrane postsynaptic specialization synapse membrane plasma membrane postsynaptic density membrane synaptic membrane cell periphery postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse organelle cell junction postsynaptic specialization membrane postsynaptic specialization synapse membrane plasma membrane postsynaptic density membrane synaptic membrane cell periphery postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse organelle cell junction postsynaptic membrane asymmetric synapse plasma membrane region cell surface growth cone axon cell projection distal axon neuron projection plasma membrane bounded cell projection site of polarized growth membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen nuclear lumen glutamatergic synapse Golgi apparatus cytoplasm endomembrane system protein-containing complex plasma membrane protein complex membrane protein complex intracellular vesicle vesicle
AA [auth U], BA [auth V], C, CA [auth W], D, AA [auth U], BA [auth V], C, CA [auth W], D, DA [auth X], I, J, O, P, S [auth c], T [auth d], U [auth i], V [auth j], W [auth o], X [auth p], Y [auth S], Z [auth T]	RGM domain family member B	molecular transducer activity coreceptor activity signaling receptor activity identical protein binding protein binding binding	cellular response to stimulus cellular response to BMP stimulus regulation of biological process cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process cellular response to growth factor stimulus cell surface receptor signaling pathway response to stimulus signaling response to endogenous stimulus biological regulation cell communication cellular response to endogenous stimulus response to BMP cellular response to stimulus cellular response to BMP stimulus regulation of biological process cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process cellular response to growth factor stimulus cell surface receptor signaling pathway response to stimulus signaling response to endogenous stimulus biological regulation cell communication cellular response to endogenous stimulus response to BMP cellular process transforming growth factor beta receptor superfamily signaling pathway signal transduction response to growth factor BMP signaling pathway enzyme-linked receptor protein signaling pathway cell adhesion positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression biosynthetic process positive regulation of RNA biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process	cellular anatomical structure membrane side of membrane cell periphery plasma membrane membrane microdomain membrane raft membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle endoplasmic reticulum-Golgi intermediate compartment cytoplasm intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, G, H, M A, B, G, H, M, N	IPR029034	Cystine-knot cytokine	Homologous Superfamily
A, B, G, H, M A, B, G, H, M, N	IPR015615	Transforming growth factor-beta-related	Family
A, B, G, H, M A, B, G, H, M, N	IPR017948	Transforming growth factor beta, conserved site	Conserved Site
A, B, G, H, M A, B, G, H, M, N	IPR001111	TGF-beta, propeptide	Domain
A, B, G, H, M A, B, G, H, M, N	IPR001839	Transforming growth factor-beta, C-terminal	Domain
E, F, K, L, Q E, F, K, L, Q, R	IPR010560	Neogenin, C-terminal	Domain
E, F, K, L, Q E, F, K, L, Q, R	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
E, F, K, L, Q E, F, K, L, Q, R	IPR003598	Immunoglobulin subtype 2	Domain
E, F, K, L, Q E, F, K, L, Q, R	IPR003599	Immunoglobulin domain subtype	Domain
E, F, K, L, Q E, F, K, L, Q, R	IPR013098	Immunoglobulin I-set	Domain
E, F, K, L, Q E, F, K, L, Q, R	IPR003961	Fibronectin type III	Domain
E, F, K, L, Q E, F, K, L, Q, R	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
E, F, K, L, Q E, F, K, L, Q, R	IPR007110	Immunoglobulin-like domain	Domain
E, F, K, L, Q E, F, K, L, Q, R	IPR036116	Fibronectin type III superfamily	Homologous Superfamily
AA [auth U], BA [auth V], C, CA [auth W], D, AA [auth U], BA [auth V], C, CA [auth W], D, DA [auth X], I, J, O, P, S [auth c], T [auth d], U [auth i], V [auth j], W [auth o], X [auth p], Y [auth S], Z [auth T]	IPR010536	Repulsive guidance molecule, N-terminal	Domain
AA [auth U], BA [auth V], C, CA [auth W], D, AA [auth U], BA [auth V], C, CA [auth W], D, DA [auth X], I, J, O, P, S [auth c], T [auth d], U [auth i], V [auth j], W [auth o], X [auth p], Y [auth S], Z [auth T]	IPR009496	Repulsive guidance molecule, C-terminal	Domain
AA [auth U], BA [auth V], C, CA [auth W], D, AA [auth U], BA [auth V], C, CA [auth W], D, DA [auth X], I, J, O, P, S [auth c], T [auth d], U [auth i], V [auth j], W [auth o], X [auth p], Y [auth S], Z [auth T]	IPR040287	Repulsive guidance molecule	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, G, H, M A, B, G, H, M, N	Pharos: P43026	fibular hypoplasia and complex brachydactyly multiple synostoses syndrome 2 acromesomelic dysplasia, Hunter-Thompson type osteoarthritis symphalangism, proximal, 1B acromesomelic dysplasia, Grebe type brachydactyly type C proximal symphalangism brachydactyly type A1C brachydactyly type A2 rheumatoid arthritis developmental dysplasia of the hip 1 calcaneonavicular coalition brachydactyly Hip Dislocation, Congenital fibular hypoplasia and complex brachydactyly multiple synostoses syndrome 2 acromesomelic dysplasia, Hunter-Thompson type osteoarthritis symphalangism, proximal, 1B acromesomelic dysplasia, Grebe type brachydactyly type C proximal symphalangism brachydactyly type A1C brachydactyly type A2 rheumatoid arthritis developmental dysplasia of the hip 1 calcaneonavicular coalition brachydactyly Hip Dislocation, Congenital malignant mesothelioma osteoarthritis susceptibility 5 acromesomelic dysplasia osteogenesis imperfecta atypical teratoid rhabdoid tumor skin carcinoma intellectual disability multiple synostoses syndrome osteoarthritis, knee osteosarcoma proximal symphalangism 1A bone development disease brachydactyly type A1 large cell medulloblastoma multiple synostoses syndrome 1 osteoarthritis susceptibility 1 polydactyly angel-shaped phalango-epiphyseal dysplasia brachydactyly type A1A
AA [auth U], BA [auth V], C, CA [auth W], D, AA [auth U], BA [auth V], C, CA [auth W], D, DA [auth X], I, J, O, P, S [auth c], T [auth d], U [auth i], V [auth j], W [auth o], X [auth p], Y [auth S], Z [auth T]	Pharos: Q6NW40	rheumatoid arthritis prostate cancer adrenoleukodystrophy colorectal adenoma gastric carcinoma lung carcinoma oligodendroglioma atopic eczema colorectal cancer hydrolethalus syndrome malignant ependymoma pancreatic intraductal papillary-mucinous neoplasm Prostatic Neoplasms atypical teratoid rhabdoid tumor cystic fibrosis rheumatoid arthritis prostate cancer adrenoleukodystrophy colorectal adenoma gastric carcinoma lung carcinoma oligodendroglioma atopic eczema colorectal cancer hydrolethalus syndrome malignant ependymoma pancreatic intraductal papillary-mucinous neoplasm Prostatic Neoplasms atypical teratoid rhabdoid tumor cystic fibrosis interstitial cystitis medulloblastoma pilocytic astrocytoma psoriasis