6YWS | pdb_00006yws

The structure of the large subunit of the mitoribosome from Neurospora crassa

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
BA [auth 0]	SCOP2B Superfamily	Ribosomal protein L36	8101685	3001346	SCOP2B (2022-06-29)
Z [auth X]	SCOP2 Family	Ribosomal protein L33p	8101772	4000511	SCOP2 (2022-06-29)
Z [auth X]	SCOP2 Superfamily	Zn-binding ribosomal proteins	8101773	3001320	SCOP2 (2022-06-29)
K [auth I]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8101689	3000433	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I [auth g]	Ribosomal_L11	e6ywsg1	A: alpha arrays	X: HTH	H: HTH	T: Ribosomal protein L11, C-terminal domain	F: Ribosomal_L11	ECOD (1.6)
I [auth g]	Ribosomal_L11_N	e6ywsg2	A: a+b two layers	X: Ribosomal protein L11/L12e N-terminal domain-like	H: Ribosomal protein L11/L12e N-terminal domain (From Topology)	T: Ribosomal protein L11/L12e N-terminal domain	F: Ribosomal_L11_N	ECOD (1.6)
G	Ribosomal_L9_N_1	e6ywsG1	A: a+b two layers	X: L9 N-domain-like	H: L9 N-domain-like (From Topology)	T: L9 N-domain-like	F: Ribosomal_L9_N_1	ECOD (1.6)
F	Ribosomal_L6	e6ywsF1	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6	ECOD (1.6)
F	Ribosomal_L6_1	e6ywsF2	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6_1	ECOD (1.6)
RA [auth e]	Ribosomal_L1_2nd_1	e6ywse2	A: a+b two layers	X: a+b domain in Ribosomal protein L1 (From Topology)	H: a+b domain in Ribosomal protein L1 (From Topology)	T: a+b domain in Ribosomal protein L1	F: Ribosomal_L1_2nd_1	ECOD (1.6)
RA [auth e]	Ribosomal_L1_1st	e6ywse1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Rossmann-like domain in Ribosomal protein L1 (From Topology)	T: Rossmann-like domain in Ribosomal protein L1	F: Ribosomal_L1_1st	ECOD (1.6)
QA [auth d]	Mhr1	e6ywsd1	A: a+b three layers	X: Mitochondrial homologous recombination protein 1 (From Topology)	H: Mitochondrial homologous recombination protein 1 (From Topology)	T: Mitochondrial homologous recombination protein 1	F: Mhr1	ECOD (1.6)
PA [auth c]	L31	e6ywsc1	A: extended segments	X: Mitochondrial 54S ribosomal protein L31 (From Topology)	H: Mitochondrial 54S ribosomal protein L31 (From Topology)	T: Mitochondrial 54S ribosomal protein L31	F: L31	ECOD (1.6)
OA [auth b]	MRPL25	e6ywsb1	A: extended segments	X: Mitochondrial 54S ribosomal protein L25 (From Topology)	H: Mitochondrial 54S ribosomal protein L25 (From Topology)	T: Mitochondrial 54S ribosomal protein L25	F: MRPL25	ECOD (1.6)
NA [auth a]	MRP-L20	e6ywsa1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: MRP-L20	ECOD (1.6)
D	Ribosomal_L4	e6ywsD1	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: Ribosomal_L4	ECOD (1.6)
MA [auth 9]	Ribonucleas_3_3_1	e6yws91	A: alpha arrays	X: RNase III catalytic domain-like (From Topology)	H: RNase III catalytic domain-like (From Topology)	T: RNase III catalytic domain-like	F: Ribonucleas_3_3_1	ECOD (1.6)
KA [auth h]	MRP_L53	e6ywsh1	A: a+b three layers	X: Thioredoxin-like	H: Thioredoxin-like (From Topology)	T: Thioredoxin-like	F: MRP_L53	ECOD (1.6)
IA [auth 7]	Img2	e6yws71	A: a+b two layers	X: Glucose permease domain IIB-like	H: eIF1-like (From Topology)	T: eIF1-like	F: Img2	ECOD (1.6)
HA [auth 6]	MRP-L46	e6yws61	A: a+b two layers	X: beta-Grasp	H: Nudix (From Topology)	T: Nudix	F: MRP-L46	ECOD (1.6)
GA [auth 5]	Ribonucleas_3_3_2	e6yws52	A: alpha arrays	X: RNase III catalytic domain-like (From Topology)	H: RNase III catalytic domain-like (From Topology)	T: RNase III catalytic domain-like	F: Ribonucleas_3_3_2	ECOD (1.6)
GA [auth 5]	dsrm	e6yws51	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: dsrm	ECOD (1.6)
FA [auth 4]	L51_S25_CI-B8	e6yws41	A: a+b three layers	X: Thioredoxin-like	H: Thioredoxin-like (From Topology)	T: Thioredoxin-like	F: L51_S25_CI-B8	ECOD (1.6)
EA [auth 3]	MRP-L27	e6yws31	A: extended segments	X: Mitochondrial 54S ribosomal protein L27 (From Topology)	H: Mitochondrial 54S ribosomal protein L27 (From Topology)	T: Mitochondrial 54S ribosomal protein L27	F: MRP-L27	ECOD (1.6)
DA [auth 2]	MRP-L28	e6yws21	A: extended segments	X: Mitochondrial 54S ribosomal protein L28 (From Topology)	H: Mitochondrial 54S ribosomal protein L28 (From Topology)	T: Mitochondrial 54S ribosomal protein L28	F: MRP-L28	ECOD (1.6)
BA [auth 0]	Ribosomal_L36	e6yws01	A: few secondary structure elements	X: Ribosomal protein L36 (From Topology)	H: Ribosomal protein L36 (From Topology)	T: Ribosomal protein L36	F: Ribosomal_L36	ECOD (1.6)
AA [auth Y]	Ribosomal_L34	e6ywsY1	A: extended segments	X: 50S ribosomal protein L34 (From Topology)	H: 50S ribosomal protein L34 (From Topology)	T: 50S ribosomal protein L34	F: Ribosomal_L34	ECOD (1.6)
Z [auth X]	Ribosomal_L33	e6ywsX1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L33	ECOD (1.6)
Y [auth W]	Ribosomal_L32p	e6ywsW1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L32p	ECOD (1.6)
X [auth V]	rpmE_like	e6ywsV1	A: few secondary structure elements	X: Ribosomal protein L31p (From Topology)	H: Ribosomal protein L31p (From Topology)	T: Ribosomal protein L31p	F: rpmE_like	ECOD (1.6)
W [auth U]	Ribosomal_L30	e6ywsU1	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: Ribosomal_L30	ECOD (1.6)
B	Ribosomal_L2_1	e6ywsB2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_L2_1	ECOD (1.6)
B	Ribosomal_L2_C_1	e6ywsB1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L2_C_1	ECOD (1.6)
P [auth N]	Ribosomal_L21p	e6ywsN1	A: beta barrels	X: Ribosomal protein L21p (From Topology)	H: Ribosomal protein L21p (From Topology)	T: Ribosomal protein L21p	F: Ribosomal_L21p	ECOD (1.6)
M [auth K]	Ribosomal_L16	e6ywsK1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: Ribosomal_L16	ECOD (1.6)
L [auth J]	Ribosomal_L27A	e6ywsJ1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L27A	ECOD (1.6)
K [auth I]	Ribosomal_L14	e6ywsI1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
J [auth H]	Ribosomal_L13	e6ywsH1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
G	PF03946	Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)	Ribosomal protein L11, N-terminal domain	The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.	Domain
G	PF01281	Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)	Ribosomal protein L9, N-terminal domain		Domain
G	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain		Domain
F	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain
E	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
D	PF12829	Transcriptional regulation of mitochondrial recombination (Mhr1)	Transcriptional regulation of mitochondrial recombination	-	Family
D	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
MA [auth 9]	PF14622	Ribonuclease-III-like (Ribonucleas_3_3)	Ribonuclease-III-like	-	Family
JA [auth 8]	PF10501	Ribosomal subunit 39S (Ribosomal_L50)	Ribosomal subunit 39S	The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...	The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].	Domain
IA [auth 7]	PF05046	Mitochondrial large subunit ribosomal protein (Img2) (Img2)	Mitochondrial large subunit ribosomal protein (Img2)	This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1].	Domain
HA [auth 6]	PF11788	39S mitochondrial ribosomal protein L46 (MRP-L46)	39S mitochondrial ribosomal protein L46	-	Family
GA [auth 5]	PF22892	MRPL44 dsRNA-binding domain (DSRM_MRPL44)	MRPL44 dsRNA-binding domain	This double stranded RNA-binding domain is found in the Large ribosomal subunit protein mL44 protein.	Domain
FA [auth 4]	PF05047	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.	Domain
EA [auth 3]	PF09809	Mitochondrial ribosomal protein L27 (MRP-L27)	Mitochondrial ribosomal protein L27	-	Family
C	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
CA [auth 1]	PF01161	Phosphatidylethanolamine-binding protein (PBP)	Phosphatidylethanolamine-binding protein		Domain
BA [auth 0]	PF00444	Ribosomal protein L36 (Ribosomal_L36)	Ribosomal protein L36		Domain
Z [auth X]	PF00471	Ribosomal protein L33 (Ribosomal_L33)	Ribosomal protein L33	-	Family
Y [auth W]	PF01783	Ribosomal L32p protein family (Ribosomal_L32p)	Ribosomal L32p protein family	-	Family
X [auth V]	PF21492	Ribosomal protein L31p, N-terminal (bL31_N)	Ribosomal protein L31p, N-terminal	Ribosomal protein L31p (bL31, also known as 54S ribosomal protein L36), is a component of the mitochondrial ribosome. Overexpression of bL31m suppresses mutations in the COX2 leader peptide-encoding and initiation codon regions [1,2]. This entry repr ...	Ribosomal protein L31p (bL31, also known as 54S ribosomal protein L36), is a component of the mitochondrial ribosome. Overexpression of bL31m suppresses mutations in the COX2 leader peptide-encoding and initiation codon regions [1,2]. This entry represents the N-terminal domain of yeast bL31 [3].	Domain
W [auth U]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
V [auth T]	PF06984	Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)	Mitochondrial 39-S ribosomal protein L47 (MRP-L47)	-	Family
U [auth S]	PF00830	Ribosomal L28 family (Ribosomal_L28)	Ribosomal L28 family	-	Family
B	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
B	PF00181	Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)	Ribosomal Proteins L2, RNA binding N-terminal domain		Domain
S [auth Q]	PF22682	Large ribosomal subunit protein uL24m (Ribosomal_uL24m-like)	Large ribosomal subunit protein uL24m	This entry represents a domain found in the homologues of large ribosomal subunit protein uL24m. This protein is a component of the mitochondrial ribosome (mitoribosome) [6].	Domain
R [auth P]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
Q [auth O]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
P [auth N]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
O [auth M]	PF01245	Ribosomal protein L19 (Ribosomal_L19)	Ribosomal protein L19	-	Family
N [auth L]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
M [auth K]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e		Domain
L [auth J]	PF05047	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.	Domain
K [auth I]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain
J [auth H]	PF10780	39S ribosomal protein L53/MRP-L53 (MRP_L53)	39S ribosomal protein L53/MRP-L53	-	Family
J [auth H]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth g]	60S ribosomal protein L19	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
H [auth f]	Uncharacterized protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
G	RIBOSOMAL_L9 domain-containing protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
F	60S ribosomal protein L6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
E	50S ribosomal protein L5	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex membraneless organelle ribosome cytosol large ribosomal subunit
SA [auth j]	L51_S25_CI-B8 domain-containing protein	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
RA [auth e]	60S ribosomal protein L1	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
QA [auth d]	Uncharacterized protein	structural molecule activity structural constituent of ribosome catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid DNA strand exchange activity catalytic activity DNA binding binding single-stranded DNA binding nucleic acid binding	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
PA [auth c]	54S ribosomal protein L31, mitochondrial	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
OA [auth b]	Mitoc_mL59 domain-containing protein	-	-	-
NA [auth a]	60S ribosomal protein L20	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
D	60S ribosomal protein L4, variant	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
MA [auth 9]	RNase III domain-containing protein	ribonuclease III activity double-stranded RNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity hydrolase activity hydrolase activity, acting on ester bonds nuclease activity RNA endonuclease activity catalytic activity structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process RNA metabolic process nucleobase-containing compound biosynthetic process mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process RNA metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process RNA processing	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
LA [auth i]	Uncharacterized protein	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
KA [auth h]	Mitochondrial ribosomal protein L44	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
JA [auth 8]	Uncharacterized protein	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
IA [auth 7]	Uncharacterized protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
HA [auth 6]	50S ribosomal subunit L30	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
GA [auth 5]	60S ribosomal protein L3	ribonuclease III activity double-stranded RNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity hydrolase activity hydrolase activity, acting on ester bonds nuclease activity RNA endonuclease activity catalytic activity RNA binding double-stranded RNA binding ribonuclease III activity double-stranded RNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity hydrolase activity hydrolase activity, acting on ester bonds nuclease activity RNA endonuclease activity catalytic activity RNA binding double-stranded RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
FA [auth 4]	Mitochondrial ribosomal protein L43	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
EA [auth 3]	Uncharacterized protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
DA [auth 2]	Uncharacterized protein	-	-	-
C	60S ribosomal protein L3	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
CA [auth 1]	Mitochondrial large ribosomal subunit YmL35	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
BA [auth 0]	Ribosomal protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
AA [auth Y]	Related to ribosomal protein L34, mitochondrial	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
Z [auth X]	Uncharacterized protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
Y [auth W]	Mitochondrial ribosomal protein subunit L32	structural molecule activity structural constituent of ribosome cation binding ion binding binding metal ion binding small molecule binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
X [auth V]	Uncharacterized protein	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
W [auth U]	50S ribosomal protein L30	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
V [auth T]	54S ribosomal protein L4, mitochondrial	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
U [auth S]	50S ribosomal protein L24	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
T [auth R]	Uncharacterized protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
B	60S ribosomal protein L2	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome transferase activity catalytic activity	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
S [auth Q]	KOW domain-containing protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membraneless organelle intracellular membraneless organelle ribosome
R [auth P]	Mitochondrial ribosomal protein subunit L23	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
Q [auth O]	Mitochondrial large ribosomal subunit	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
P [auth N]	Aconitate hydratase	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
O [auth M]	Mitochondrial ribosomal protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
N [auth L]	50S ribosomal protein L17	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
M [auth K]	60S ribosomal protein L16	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
L [auth J]	Ribosomal protein L15	-	-	-
K [auth I]	50S ribosomal protein L14	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
J [auth H]	Ribosomal protein L13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
A	RNA (2820-MER)	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I [auth g]	IPR020783	Large ribosomal subunit protein uL11, C-terminal	Domain
I [auth g]	IPR000911	Ribosomal protein uL11	Family
I [auth g]	IPR036769	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Homologous Superfamily
I [auth g]	IPR020784	Large ribosomal subunit protein uL11, N-terminal	Domain
I [auth g]	IPR036796	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Homologous Superfamily
I [auth g]	IPR006519	Large ribosomal subunit protein uL11, bacteria	Family
H [auth f]	IPR043141	Large ribosomal subunit protein uL10-like domain superfamily	Homologous Superfamily
H [auth f]	IPR047865	Large ribosomal subunit protein uL10, bacteria/organella	Family
G	IPR009027	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Homologous Superfamily
G	IPR036935	Large ribosomal subunit protein bL9, N-terminal domain superfamily	Homologous Superfamily
G	IPR020070	Large ribosomal subunit protein bL9, N-terminal	Domain
G	IPR000244	Large ribosomal subunit protein bL9	Family
F	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
F	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
F	IPR000702	Large ribosomal subunit protein uL6-like	Family
F	IPR019906	Large ribosomal subunit protein uL6, bacteria	Family
F	IPR002358	Large ribosomal subunit protein uL6, conserved site	Conserved Site
E	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
E	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
E	IPR002132	Large ribosomal subunit protein uL5	Family
SA [auth j]	IPR007741	Ribosomal protein/NADH dehydrogenase domain	Domain
SA [auth j]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
SA [auth j]	IPR040049	Ribosomal subunit protein mS25/mL61, mitochondrial	Family
RA [auth e]	IPR016095	Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain	Homologous Superfamily
RA [auth e]	IPR023674	Ribosomal protein uL1-like	Homologous Superfamily
RA [auth e]	IPR028364	Ribosomal protein uL1/ribosomal biogenesis protein	Family
QA [auth d]	IPR024629	Large ribosomal subunit protein mL67	Family
PA [auth c]	IPR016340	Large ribosomal subunit protein mL60	Family
NA [auth a]	IPR024388	Large ribosomal subunit protein mL58	Family
D	IPR013005	Large ribosomal subunit protein uL4-like	Family
D	IPR002136	Large ribosomal subunit protein uL4	Family
D	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
MA [auth 9]	IPR040030	Large ribosomal subunit protein mL57	Family
MA [auth 9]	IPR000999	Ribonuclease III domain	Domain
MA [auth 9]	IPR036389	Ribonuclease III, endonuclease domain superfamily	Homologous Superfamily
LA [auth i]	IPR013870	Large ribosomal subunit protein mL54	Family
KA [auth h]	IPR019716	Large ribosomal subunit protein mL53	Family
KA [auth h]	IPR042776	Large ribosomal subunit protein mL53, fungi	Family
JA [auth 8]	IPR018305	Large ribosomal subunit protein mL50	Family
IA [auth 7]	IPR007740	Large ribosomal subunit protein mL49	Family
HA [auth 6]	IPR000086	NUDIX hydrolase domain	Domain
HA [auth 6]	IPR015797	NUDIX hydrolase-like domain superfamily	Homologous Superfamily
HA [auth 6]	IPR021757	Large ribosomal subunit protein mL46, N-terminal	Domain
HA [auth 6]	IPR040008	Large ribosomal subunit protein mL46	Family
HA [auth 6]	IPR033650	Large ribosomal subunit protein mL46, NUDIX domain	Domain
GA [auth 5]	IPR044443	Large ribosomal subunit protein mL44, dsRNA binding domain, fungi	Domain
GA [auth 5]	IPR000999	Ribonuclease III domain	Domain
GA [auth 5]	IPR014720	Double-stranded RNA-binding domain	Domain
GA [auth 5]	IPR036389	Ribonuclease III, endonuclease domain superfamily	Homologous Superfamily
FA [auth 4]	IPR007741	Ribosomal protein/NADH dehydrogenase domain	Domain
FA [auth 4]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
FA [auth 4]	IPR039927	Large ribosomal subunit protein mL43	Family
EA [auth 3]	IPR019189	Large ribosomal subunit protein mL41	Family
C	IPR019927	Large ribosomal subunit protein uL3, bacteria/organella	Family
C	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
C	IPR000597	Large ribosomal subunit protein uL3	Family
CA [auth 1]	IPR036610	PEBP-like superfamily	Homologous Superfamily
CA [auth 1]	IPR008914	Phosphatidylethanolamine-binding protein	Family
CA [auth 1]	IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	Family
BA [auth 0]	IPR000473	Large ribosomal subunit protein bL36	Family
BA [auth 0]	IPR052010	Ribosomal Large Subunit bL36	Family
BA [auth 0]	IPR035977	Large ribosomal subunit protein bL36 superfamily	Homologous Superfamily
AA [auth Y]	IPR000271	Large ribosomal subunit protein bL34	Family
Z [auth X]	IPR052008	Mitochondrial ribosomal protein bL33	Family
Z [auth X]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
Z [auth X]	IPR038584	Large ribosomal subunit protein bL33 superfamily	Homologous Superfamily
Z [auth X]	IPR001705	Large ribosomal subunit protein bL33	Family
Y [auth W]	IPR002677	Large ribosomal subunit protein bL32	Family
Y [auth W]	IPR051991	Mitochondrial ribosomal protein bL32	Family
Y [auth W]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
X [auth V]	IPR034600	Large ribosomal subunit protein bL31m	Family
X [auth V]	IPR048874	Ribosomal protein bL31m, N-terminal domain	Domain
W [auth U]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
W [auth U]	IPR005996	Large ribosomal subunit protein uL30, bacteria	Family
W [auth U]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
W [auth U]	IPR018038	Large ribosomal subunit protein uL30, conserved site	Conserved Site
V [auth T]	IPR038340	MRP-L47 superfamily, mitochondrial	Homologous Superfamily
V [auth T]	IPR010729	Large ribosomal subunit protein uL29m, mitochondrial	Family
U [auth S]	IPR037147	Large ribosomal subunit protein bL28 superfamily	Homologous Superfamily
U [auth S]	IPR026569	Large ribosomal subunit protein bL28	Family
U [auth S]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
T [auth R]	IPR001684	Large ribosomal subunit protein bL27	Family
B	IPR005880	Large ribosomal subunit protein uL2, bacteria/organella	Family
B	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
B	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
B	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
B	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
B	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
B	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
B	IPR002171	Large ribosomal subunit protein uL2	Family
S [auth Q]	IPR003256	Large ribosomal subunit protein uL24	Family
S [auth Q]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
S [auth Q]	IPR005824	KOW	Domain
S [auth Q]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
R [auth P]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
R [auth P]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
R [auth P]	IPR013025	Large ribosomal subunit protein uL23-like	Family
Q [auth O]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
Q [auth O]	IPR001063	Large ribosomal subunit protein uL22	Family
Q [auth O]	IPR047867	Large ribosomal subunit protein uL22, bacteria/organella	Family
P [auth N]	IPR028909	Large ribosomal subunit protein bL21-like	Family
P [auth N]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
O [auth M]	IPR001857	Large ribosomal subunit protein bL19	Family
O [auth M]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
O [auth M]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
N [auth L]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
N [auth L]	IPR047859	Large ribosomal subunit protein bL17, conserved site	Conserved Site
N [auth L]	IPR000456	Large ribosomal subunit protein bL17	Family
M [auth K]	IPR000114	Large ribosomal subunit protein uL16, bacteria	Family
M [auth K]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
M [auth K]	IPR020798	Large ribosomal subunit protein uL16, conserved site	Conserved Site
M [auth K]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
M [auth K]	IPR047873	Large ribosomal subunit protein uL16	Family
K [auth I]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
K [auth I]	IPR000218	Large ribosomal subunit protein uL14	Family
K [auth I]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
K [auth I]	IPR005745	Large ribosomal subunit protein uL14, bacteria	Family
J [auth H]	IPR005822	Large ribosomal subunit protein uL13	Family
J [auth H]	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
J [auth H]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily