6YNY

Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - F1Fo composite dimer model

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
KB [auth g2]	SCOP2B Superfamily	ATP synthase gamma subunit-like	8099238	3000451	SCOP2B (2022-06-29)
QA [auth g1]	SCOP2B Superfamily	ATP synthase gamma subunit-like	8099238	3000451	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
IA [auth Q]	F_UNCLASSIFIED	e6ynyQ1	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: F_UNCLASSIFIED	ECOD (1.6)
P [auth q]	F_UNCLASSIFIED	e6ynyq1	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: F_UNCLASSIFIED	ECOD (1.6)
JB [auth G2]	PF00213	e6ynyG21	A: alpha bundles	X: ATPD N-terminal domain-like	H: N-terminal domain of the delta subunit of the F1F0-ATP synthase (From Topology)	T: N-terminal domain of the delta subunit of the F1F0-ATP synthase	F: PF00213	ECOD (1.6)
PA [auth G1]	PF00213	e6ynyG11	A: alpha bundles	X: ATPD N-terminal domain-like	H: N-terminal domain of the delta subunit of the F1F0-ATP synthase (From Topology)	T: N-terminal domain of the delta subunit of the F1F0-ATP synthase	F: PF00213	ECOD (1.6)
KB [auth g2]	PF00231	e6ynyg21	A: a/b three-layered sandwiches	X: ATP synthase (F1-ATPase), gamma subunit (From Topology)	H: ATP synthase (F1-ATPase), gamma subunit (From Topology)	T: ATP synthase (F1-ATPase), gamma subunit	F: PF00231	ECOD (1.6)
QA [auth g1]	PF00231	e6ynyg11	A: a/b three-layered sandwiches	X: ATP synthase (F1-ATPase), gamma subunit (From Topology)	H: ATP synthase (F1-ATPase), gamma subunit (From Topology)	T: ATP synthase (F1-ATPase), gamma subunit	F: PF00231	ECOD (1.6)
LB [auth C2]	PF02874	e6ynyC22	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
LB [auth C2]	PF00306	e6ynyC21	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF00306	ECOD (1.6)
LB [auth C2]	PF00006	e6ynyC23	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
NB [auth B2]	PF02874	e6ynyB21	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
NB [auth B2]	PF00306	e6ynyB22	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF00306	ECOD (1.6)
NB [auth B2]	PF00006	e6ynyB23	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
PB [auth A2]	PF02874	e6ynyA23	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
PB [auth A2]	PF00306	e6ynyA21	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF00306	ECOD (1.6)
PB [auth A2]	PF00006	e6ynyA22	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
RA [auth C1]	PF02874	e6ynyC13	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
RA [auth C1]	PF00306	e6ynyC11	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF00306	ECOD (1.6)
RA [auth C1]	PF00006	e6ynyC12	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
TA [auth B1]	PF02874	e6ynyB11	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
TA [auth B1]	PF00306	e6ynyB12	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF00306	ECOD (1.6)
TA [auth B1]	PF00006	e6ynyB13	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
VA [auth A1]	PF02874	e6ynyA12	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
VA [auth A1]	PF00306	e6ynyA11	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF00306	ECOD (1.6)
VA [auth A1]	PF00006	e6ynyA13	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
MB [auth D2]	PF02874	e6ynyD21	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
MB [auth D2]	PF22919	e6ynyD22	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF22919	ECOD (1.6)
MB [auth D2]	PF00006	e6ynyD23	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
OB [auth F2]	PF02874	e6ynyF22	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
OB [auth F2]	PF22919	e6ynyF23	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF22919	ECOD (1.6)
OB [auth F2]	PF00006	e6ynyF21	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
QB [auth E2]	PF02874	e6ynyE22	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
QB [auth E2]	PF22919	e6ynyE23	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF22919	ECOD (1.6)
QB [auth E2]	PF00006	e6ynyE21	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
SA [auth D1]	PF02874	e6ynyD13	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
SA [auth D1]	PF22919	e6ynyD12	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF22919	ECOD (1.6)
SA [auth D1]	PF00006	e6ynyD11	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
UA [auth F1]	PF02874	e6ynyF13	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
UA [auth F1]	PF22919	e6ynyF11	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF22919	ECOD (1.6)
UA [auth F1]	PF00006	e6ynyF12	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
WA [auth E1]	PF02874	e6ynyE13	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF02874	ECOD (1.6)
WA [auth E1]	PF22919	e6ynyE12	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: PF22919	ECOD (1.6)
WA [auth E1]	PF00006	e6ynyE11	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00006	ECOD (1.6)
AB [auth M1]	PF00137	e6ynyM11	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
AC [auth Q2]	PF00137	e6ynyQ21	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
BB [auth L1]	PF00137	e6ynyL11	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
CB [auth K1]	PF00137	e6ynyK11	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
DB [auth J1]	PF00137	e6ynyJ11	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
EB [auth I1]	PF00137	e6ynyI11	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
FB [auth H1]	PF00137	e6ynyH11	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
GB [auth Q1]	PF00137	e6ynyQ11	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
RB [auth P2]	PF00137	e6ynyP21	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
SB [auth O2]	PF00137	e6ynyO21	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
TB [auth N2]	PF00137	e6ynyN21	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
UB [auth M2]	PF00137	e6ynyM21	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
VB [auth L2]	PF00137	e6ynyL21	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
WB [auth K2]	PF00137	e6ynyK21	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
XA [auth P1]	PF00137	e6ynyP11	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
XB [auth J2]	PF00137	e6ynyJ21	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
YA [auth O1]	PF00137	e6ynyO11	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
YB [auth I2]	PF00137	e6ynyI21	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
ZA [auth N1]	PF00137	e6ynyN11	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)
ZB [auth H2]	PF00137	e6ynyH21	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: PF00137	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth d], V [auth D]	PF05873	ATP synthase D chain, mitochondrial (ATP5H) (Mt_ATP-synt_D)	ATP synthase D chain, mitochondrial (ATP5H)	-	Family
LA [auth E], S [auth e]	PF07992	Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox_2)	Pyridine nucleotide-disulphide oxidoreductase	This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.	Domain
OA [auth t]	PF00561	alpha/beta hydrolase fold (Abhydrolase_1)	alpha/beta hydrolase fold	This catalytic domain is found in a very wide range of enzymes.	Domain
JB [auth G2], PA [auth G1]	PF00213	ATP synthase delta (OSCP) subunit (OSCP)	ATP synthase delta (OSCP) subunit	-	Family
KB [auth g2], QA [auth g1]	PF00231	ATP synthase (ATP-synt)	ATP synthase	-	Domain
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)	ATP synthase alpha/beta family, nucleotide-binding domain	This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.	Domain
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	PF00306	ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C)	ATP synthase alpha/beta chain, C terminal domain	-	Domain
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	PF02874	ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)	ATP synthase alpha/beta family, beta-barrel domain	This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.	Domain
MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], WA [auth E1]	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)	ATP synthase alpha/beta family, nucleotide-binding domain	This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.	Domain
MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], WA [auth E1]	PF02874	ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)	ATP synthase alpha/beta family, beta-barrel domain	This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.	Domain
AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], EB [auth I1], FB [auth H1], GB [auth Q1], RB [auth P2], SB [auth O2], TB [auth N2], UB [auth M2], VB [auth L2], WB [auth K2], XA [auth P1], XB [auth J2], YA [auth O1], YB [auth I2], ZA [auth N1], ZB [auth H2]	PF00137	ATP synthase subunit C (ATP-synt_C)	ATP synthase subunit C	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth d], V [auth D]	subunit d	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	ribose phosphate metabolic process ATP metabolic process ATP biosynthetic process nucleotide biosynthetic process organonitrogen compound biosynthetic process carbohydrate derivative metabolic process purine ribonucleotide biosynthetic process purine ribonucleoside triphosphate biosynthetic process proton motive force-driven ATP synthesis nucleobase-containing compound metabolic process ribonucleotide biosynthetic process purine nucleotide metabolic process organic substance metabolic process ribonucleotide metabolic process purine nucleoside triphosphate biosynthetic process ribose phosphate metabolic process ATP metabolic process ATP biosynthetic process nucleotide biosynthetic process organonitrogen compound biosynthetic process carbohydrate derivative metabolic process purine ribonucleotide biosynthetic process purine ribonucleoside triphosphate biosynthetic process proton motive force-driven ATP synthesis nucleobase-containing compound metabolic process ribonucleotide biosynthetic process purine nucleotide metabolic process organic substance metabolic process ribonucleotide metabolic process purine nucleoside triphosphate biosynthetic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process purine ribonucleoside triphosphate metabolic process phosphate-containing compound metabolic process organic substance biosynthetic process small molecule metabolic process phosphorus metabolic process ribose phosphate biosynthetic process ribonucleoside triphosphate metabolic process nucleoside phosphate metabolic process carbohydrate derivative biosynthetic process purine nucleoside triphosphate metabolic process organonitrogen compound metabolic process nucleoside triphosphate biosynthetic process cellular metabolic process primary metabolic process nucleotide metabolic process nucleobase-containing compound biosynthetic process ribonucleoside triphosphate biosynthetic process purine-containing compound metabolic process organic cyclic compound metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process organic cyclic compound biosynthetic process nucleoside phosphate biosynthetic process metabolic process cellular process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process purine nucleotide biosynthetic process	membrane-bounded organelle protein-containing complex ATPase complex intracellular anatomical structure mitochondrial membrane organelle inner membrane mitochondrion membrane protein complex intracellular organelle organelle envelope proton-transporting two-sector ATPase complex proton-transporting ATP synthase complex, coupling factor F(o) mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) mitochondrial protein-containing complex membrane-bounded organelle protein-containing complex ATPase complex intracellular anatomical structure mitochondrial membrane organelle inner membrane mitochondrion membrane protein complex intracellular organelle organelle envelope proton-transporting two-sector ATPase complex proton-transporting ATP synthase complex, coupling factor F(o) mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) mitochondrial protein-containing complex catalytic complex membrane proton-transporting ATP synthase complex cellular anatomical entity intracellular membrane-bounded organelle proton-transporting two-sector ATPase complex, proton-transporting domain mitochondrial inner membrane mitochondrial proton-transporting ATP synthase complex inner mitochondrial membrane protein complex organelle mitochondrial envelope cytoplasm organelle membrane
E [auth i], X [auth I]	subunit i/j	-	-	membrane cellular anatomical entity
AA [auth G], H [auth g]	ATPTT3	-	-	membrane cellular anatomical entity
CA [auth J], J [auth j]	ATPTT5	-	-	-
DA [auth L], K [auth l]	ATPTT6	-	-	-
GA [auth O], N [auth o]	ATPTT9	-	-	-
HA [auth P], O [auth p]	ATPTT10	-	-	-
JA [auth R], Q [auth r]	ATPTT12	-	-	-
BC [auth d2], HB [auth d1]	subunit delta	-	-	-
CC [auth e2], IB [auth e1]	subunit epsilon	-	-	-
A [auth a], T [auth A]	subunit a	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
EA [auth M], L [auth m]	ATPTT7	-	-	-
FA [auth N], M [auth n]	ATPTT8	-	-	-
IA [auth Q], P [auth q]	ATPTT11	-	-	-
KA [auth S], R [auth s]	ATPTT13	-	-	-
LA [auth E], S [auth e]	ATPTT1	oxidoreductase activity catalytic activity	-	-
B [auth b], U [auth B]	subunit b	-	-	membrane cellular anatomical entity
MA [auth i2], NA [auth i1]	Inhibitor of F1 (IF1)	-	-	-
OA [auth t]	ATPTT2	hydrolase activity catalytic activity	-	-
JB [auth G2], PA [auth G1]	Oligomycin sensitivity-conferring protein (OSCP)	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity monoatomic ion channel activity proton channel activity proton-transporting ATP synthase activity, rotational mechanism monoatomic cation channel activity passive transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity monoatomic ion channel activity proton channel activity proton-transporting ATP synthase activity, rotational mechanism monoatomic cation channel activity passive transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity ligase activity	-	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm organelle membrane
KB [auth g2], QA [auth g1]	subunit gamma	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity monoatomic ion channel activity proton channel activity proton-transporting ATP synthase activity, rotational mechanism monoatomic cation channel activity passive transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity monoatomic ion channel activity proton channel activity proton-transporting ATP synthase activity, rotational mechanism monoatomic cation channel activity passive transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity ligase activity	-	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm organelle membrane protein-containing complex ATPase complex catalytic complex proton-transporting ATP synthase complex membrane protein complex proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain proton-transporting ATP synthase complex, catalytic core F(1)
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	subunit alpha	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity monoatomic ion channel activity proton channel activity proton-transporting ATP synthase activity, rotational mechanism monoatomic cation channel activity passive transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity ligase activity	-	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm organelle membrane protein-containing complex ATPase complex catalytic complex proton-transporting ATP synthase complex membrane protein complex proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain proton-transporting ATP synthase complex, catalytic core F(1)
MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], WA [auth E1]	subunit beta	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity monoatomic ion channel activity proton channel activity proton-transporting ATP synthase activity, rotational mechanism monoatomic cation channel activity passive transmembrane transporter activity channel activity ligase activity	-	protein-containing complex ATPase complex intracellular anatomical structure catalytic complex proton-transporting ATP synthase complex membrane membrane protein complex cellular anatomical entity proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain proton-transporting ATP synthase complex, catalytic core F(1)
AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], EB [auth I1], FB [auth H1], GB [auth Q1], RB [auth P2], SB [auth O2], TB [auth N2], UB [auth M2], VB [auth L2], WB [auth K2], XA [auth P1], XB [auth J2], YA [auth O1], YB [auth I2], ZA [auth N1], ZB [auth H2]	subunit c	hydrolase activity catalytic activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity binding lipid binding	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle protein-containing complex ATPase complex catalytic complex membrane proton-transporting ATP synthase complex membrane protein complex membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle protein-containing complex ATPase complex catalytic complex membrane proton-transporting ATP synthase complex membrane protein complex proton-transporting two-sector ATPase complex, proton-transporting domain proton-transporting two-sector ATPase complex proton-transporting ATP synthase complex, coupling factor F(o)
D [auth f], W [auth F]	subunit f	-	-	-
F [auth k], Y [auth K]	subunit k	-	-	membrane cellular anatomical entity
G [auth c], Z [auth C]	subunit 8	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
BA [auth H], I [auth h]	ATPTT4	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth d], V [auth D]	IPR036228	ATP synthase, F0 complex, subunit D superfamily, mitochondrial	Homologous Superfamily
C [auth d], V [auth D]	IPR008689	ATP synthase, F0 complex, subunit D, mitochondrial	Family
IA [auth Q], P [auth q]	IPR009081	Phosphopantetheine binding ACP domain	Domain
IA [auth Q], P [auth q]	IPR036736	ACP-like superfamily	Homologous Superfamily
LA [auth E], S [auth e]	IPR015904	Sulphide quinone-reductase	Family
LA [auth E], S [auth e]	IPR023753	FAD/NAD(P)-binding domain	Domain
LA [auth E], S [auth e]	IPR036188	FAD/NAD(P)-binding domain superfamily	Homologous Superfamily
OA [auth t]	IPR000073	Alpha/beta hydrolase fold-1	Domain
OA [auth t]	IPR029058	Alpha/Beta hydrolase fold	Homologous Superfamily
JB [auth G2], PA [auth G1]	IPR000711	ATPase, OSCP/delta subunit	Family
JB [auth G2], PA [auth G1]	IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily	Homologous Superfamily
KB [auth g2], QA [auth g1]	IPR000131	ATP synthase, F1 complex, gamma subunit	Family
KB [auth g2], QA [auth g1]	IPR035968	ATP synthase, F1 complex, gamma subunit superfamily	Homologous Superfamily
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	IPR038376	ATP synthase, alpha subunit, C-terminal domain superfamily	Homologous Superfamily
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	Domain
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	IPR033732	ATP synthase, F1 complex, alpha subunit nucleotide-binding domain	Domain
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	Homologous Superfamily
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	IPR023366	ATP synthase subunit alpha, N-terminal domain-like superfamily	Homologous Superfamily
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	IPR000793	ATP synthase, alpha subunit, C-terminal	Domain
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	Active Site
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	Domain
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	IPR005294	ATP synthase, F1 complex, alpha subunit	Family
LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], LB [auth C2], NB [auth B2], PB [auth A2], RA [auth C1], TA [auth B1], VA [auth A1]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], WA [auth E1]	IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	Domain
MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], WA [auth E1]	IPR024034	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal	Homologous Superfamily
MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], WA [auth E1]	IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	Homologous Superfamily
MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], WA [auth E1]	IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	Active Site
MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], WA [auth E1]	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	Domain
MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], WA [auth E1]	IPR003593	AAA+ ATPase domain	Domain
MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], WA [auth E1]	IPR005722	ATP synthase, F1 complex, beta subunit	Family
MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], MB [auth D2], OB [auth F2], QB [auth E2], SA [auth D1], UA [auth F1], WA [auth E1]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], EB [auth I1], FB [auth H1], GB [auth Q1], RB [auth P2], SB [auth O2], TB [auth N2], UB [auth M2], VB [auth L2], WB [auth K2], XA [auth P1], XB [auth J2], YA [auth O1], YB [auth I2], ZA [auth N1], ZB [auth H2]	IPR035921	F/V-ATP synthase subunit C superfamily	Homologous Superfamily
AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], EB [auth I1], FB [auth H1], GB [auth Q1], RB [auth P2], SB [auth O2], TB [auth N2], UB [auth M2], VB [auth L2], WB [auth K2], XA [auth P1], XB [auth J2], YA [auth O1], YB [auth I2], ZA [auth N1], ZB [auth H2]	IPR038662	F1F0 ATP synthase subunit C superfamily	Homologous Superfamily
AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], EB [auth I1], FB [auth H1], GB [auth Q1], RB [auth P2], SB [auth O2], TB [auth N2], UB [auth M2], VB [auth L2], WB [auth K2], XA [auth P1], XB [auth J2], YA [auth O1], YB [auth I2], ZA [auth N1], ZB [auth H2]	IPR020537	ATP synthase, F0 complex, subunit C, DCCD-binding site	Binding Site
AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], AB [auth M1], AC [auth Q2], BB [auth L1], CB [auth K1], DB [auth J1], EB [auth I1], FB [auth H1], GB [auth Q1], RB [auth P2], SB [auth O2], TB [auth N2], UB [auth M2], VB [auth L2], WB [auth K2], XA [auth P1], XB [auth J2], YA [auth O1], YB [auth I2], ZA [auth N1], ZB [auth H2]	IPR002379	V-ATPase proteolipid subunit C-like domain	Domain

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A [auth a], AA [auth G], AB [auth M1], AC [auth Q2], B [auth b] A [auth a], AA [auth G], AB [auth M1], AC [auth Q2], B [auth b], BB [auth L1], CB [auth K1], DB [auth J1], E [auth i], EB [auth I1], F [auth k], FB [auth H1], G [auth c], GB [auth Q1], H [auth g], JB [auth G2], KB [auth g2], LB [auth C2], MB [auth D2], NB [auth B2], OB [auth F2], PA [auth G1], PB [auth A2], QA [auth g1], QB [auth E2], RA [auth C1], RB [auth P2], SA [auth D1], SB [auth O2], T [auth A], TA [auth B1], TB [auth N2], U [auth B], UA [auth F1], UB [auth M2], VA [auth A1], VB [auth L2], WA [auth E1], WB [auth K2], X [auth I], XA [auth P1], XB [auth J2], Y [auth K], YA [auth O1], YB [auth I2], Z [auth C], ZA [auth N1], ZB [auth H2]	OPM	Transmembrane	Alpha-helical polytopic	Proton or Sodium translocating F-type, V-type and A-type ATPases	V-type and F-type ATPases

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth a], AA [auth G], AB [auth M1], AC [auth Q2], B [auth b] A [auth a], AA [auth G], AB [auth M1], AC [auth Q2], B [auth b], BB [auth L1], CB [auth K1], DB [auth J1], E [auth i], EB [auth I1], F [auth k], FB [auth H1], G [auth c], GB [auth Q1], H [auth g], JB [auth G2], KB [auth g2], LB [auth C2], MB [auth D2], NB [auth B2], OB [auth F2], PA [auth G1], PB [auth A2], QA [auth g1], QB [auth E2], RA [auth C1], RB [auth P2], SA [auth D1], SB [auth O2], T [auth A], TA [auth B1], TB [auth N2], U [auth B], UA [auth F1], UB [auth M2], VA [auth A1], VB [auth L2], WA [auth E1], WB [auth K2], X [auth I], XA [auth P1], XB [auth J2], Y [auth K], YA [auth O1], YB [auth I2], Z [auth C], ZA [auth N1], ZB [auth H2]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	F-type ATPase	F₁F_o type III ATP synthase (composite structure, dimeric)