Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
J [auth j]d6ymxj_ All alpha proteins Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h automated matches automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
V [auth L]d6ymxl1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
M [auth A]d6ymxa1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
N [auth B]d6ymxb1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
W [auth M]d6ymxm1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
X [auth N]d6ymxn1 Membrane and cell surface proteins and peptides Heme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
X [auth N]d6ymxn2 Membrane and cell surface proteins and peptides a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
P [auth D]d6ymxd1 All alpha proteins Cytochrome c Cytochrome c Cytochrome bc1 domain automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
P [auth D]d6ymxd2 Membrane and cell surface proteins and peptides Single transmembrane helix Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor automated matches automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
Y [auth O]d6ymxo1 All alpha proteins Cytochrome c Cytochrome c Cytochrome bc1 domain automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
Y [auth O]d6ymxo2 Membrane and cell surface proteins and peptides Single transmembrane helix Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor automated matches automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
Q [auth E]d6ymxe2 All beta proteins ISP domain ISP domain Rieske iron-sulfur protein (ISP) automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
Q [auth E]d6ymxe1 Membrane and cell surface proteins and peptides Single transmembrane helix ISP transmembrane anchor automated matches automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
Z [auth P]d6ymxp2 All beta proteins ISP domain ISP domain Rieske iron-sulfur protein (ISP) automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
Z [auth P]d6ymxp1 Membrane and cell surface proteins and peptides Single transmembrane helix ISP transmembrane anchor automated matches automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
R [auth F]d6ymxf_ Membrane and cell surface proteins and peptides Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
BA [auth R]d6ymxr_ Membrane and cell surface proteins and peptides 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
S [auth G]d6ymxg_ Membrane and cell surface proteins and peptides 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
CA [auth S]d6ymxs_ Membrane and cell surface proteins and peptides Single transmembrane helix Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
T [auth H]d6ymxh_ Membrane and cell surface proteins and peptides Single transmembrane helix Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
U [auth I]d6ymxi_ Membrane and cell surface proteins and peptides Single transmembrane helix Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
AA [auth Q]d6ymxq_ Membrane and cell surface proteins and peptides Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
DA [auth T]d6ymxt_ Membrane and cell surface proteins and peptides Single transmembrane helix Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)
C [auth c]d6ymxc_ Membrane and cell surface proteins and peptides Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like automated matches automated matches (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth a]SCOP2B SuperfamilyCytochrome c oxidase subunit I-like8095115 3000653 SCOP2B (2022-06-29)
J [auth j]SCOP2B SuperfamilyCytochrome c oxidase subunit h8095569 3000395 SCOP2B (2022-06-29)
V [auth L]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040292 3001831 SCOP2B (2022-06-29)
V [auth L]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040294 3001831 SCOP2B (2022-06-29)
M [auth A]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040292 3001831 SCOP2B (2022-06-29)
M [auth A]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040294 3001831 SCOP2B (2022-06-29)
N [auth B]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040300 3001831 SCOP2B (2022-06-29)
N [auth B]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040297 3001831 SCOP2B (2022-06-29)
W [auth M]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040297 3001831 SCOP2B (2022-06-29)
W [auth M]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040300 3001831 SCOP2B (2022-06-29)
X [auth N]SCOP2B SuperfamilyTransmembrane di-heme cytochromes8040302 3000517 SCOP2B (2022-06-29)
X [auth N]SCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040299 3000966 SCOP2B (2022-06-29)
O [auth C]SCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040299 3000966 SCOP2B (2022-06-29)
O [auth C]SCOP2B SuperfamilyTransmembrane di-heme cytochromes8040302 3000517 SCOP2B (2022-06-29)
P [auth D]SCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor8040305 3000762 SCOP2B (2022-06-29)
P [auth D]SCOP2B SuperfamilyCytochrome c8040304 3000815 SCOP2B (2022-06-29)
Y [auth O]SCOP2B SuperfamilyCytochrome c8040304 3000815 SCOP2B (2022-06-29)
Y [auth O]SCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor8040305 3000762 SCOP2B (2022-06-29)
Q [auth E]SCOP2B SuperfamilyISP transmembrane anchor8040308 3000753 SCOP2B (2022-06-29)
Q [auth E]SCOP2B SuperfamilyISP domain8040307 3000233 SCOP2B (2022-06-29)
Z [auth P]SCOP2B SuperfamilyISP transmembrane anchor8040308 3000753 SCOP2B (2022-06-29)
Z [auth P]SCOP2B SuperfamilyISP domain8040307 3000233 SCOP2B (2022-06-29)
R [auth F]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040312 3000806 SCOP2B (2022-06-29)
BA [auth R]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040315 3000797 SCOP2B (2022-06-29)
S [auth G]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040315 3000797 SCOP2B (2022-06-29)
CA [auth S]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040318 3000770 SCOP2B (2022-06-29)
T [auth H]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040318 3000770 SCOP2B (2022-06-29)
U [auth I]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040319 3000779 SCOP2B (2022-06-29)
AA [auth Q]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040312 3000806 SCOP2B (2022-06-29)
DA [auth T]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040319 3000779 SCOP2B (2022-06-29)
C [auth c]SCOP2B SuperfamilyCytochrome c oxidase subunit III-like8095567 3000671 SCOP2B (2022-06-29)
F [auth f]SCOP2B SuperfamilyCytochrome c oxidase subunit E8095803 3001402 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth a]COX1e6ymxa1 A: alpha superhelicesX: Cytochrome c oxidase subunit I-likeH: Cytochrome c oxidase subunit I-like (From Topology)T: Cytochrome c oxidase subunit I-likeF: COX1ECOD (1.6)
J [auth j]COX6Be6ymxj1 A: few secondary structure elementsX: Cytochrome c oxidase subunit h (From Topology)H: Cytochrome c oxidase subunit h (From Topology)T: Cytochrome c oxidase subunit hF: COX6BECOD (1.6)
K [auth k]COX6Ae6ymxk1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIaF: COX6AECOD (1.6)
V [auth L]Peptidase_M16_Ce6ymxL1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
V [auth L]Peptidase_M16e6ymxL2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
M [auth A]Peptidase_M16_Ce6ymxA2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
M [auth A]Peptidase_M16e6ymxA1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
N [auth B]Peptidase_M16e6ymxB1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
N [auth B]UNK_F_TYPEe6ymxB2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: UNK_F_TYPEECOD (1.6)
W [auth M]Peptidase_M16e6ymxM1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
W [auth M]UNK_F_TYPEe6ymxM2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: UNK_F_TYPEECOD (1.6)
X [auth N]Cytochrom_B_Ce6ymxN2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
X [auth N]Cytochrome_Be6ymxN1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
O [auth C]Cytochrom_B_Ce6ymxC2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
O [auth C]Cytochrome_Be6ymxC1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
P [auth D]Cytochrom_C1_Ne6ymxD2 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
P [auth D]Cytochrom_C1_Ce6ymxD1 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
Y [auth O]Cytochrom_C1_Ne6ymxO2 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
Y [auth O]Cytochrom_C1_Ce6ymxO1 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
Q [auth E]Rieske_cytochrome_bc1e6ymxE2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
Q [auth E]Rieske_6e6ymxE1 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
Q [auth E]UCR_TMe6ymxE3 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
Z [auth P]Rieske_cytochrome_bc1e6ymxP2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
Z [auth P]Rieske_6e6ymxP3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
Z [auth P]UCR_TMe6ymxP1 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
R [auth F]UCR_hingee6ymxF1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
BA [auth R]UCR_14kDe6ymxR1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
S [auth G]UCR_14kDe6ymxG1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
B [auth b]COX2e6ymxb2 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: COX2ECOD (1.6)
B [auth b]COX2_TMe6ymxb1 A: extended segmentsX: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)T: Cytochrome c oxidase subunit II-like, transmembrane regionF: COX2_TMECOD (1.6)
CA [auth S]UcrQe6ymxS1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
T [auth H]UcrQe6ymxH1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
U [auth I]UCR_UQCRX_QCR9e6ymxI1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
AA [auth Q]UCR_hingee6ymxQ1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
DA [auth T]UCR_UQCRX_QCR9e6ymxT1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
EA [auth U]UNK_F_TYPEe6ymxU1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UNK_F_TYPEECOD (1.6)
FA [auth V]UNK_F_TYPEe6ymxV1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UNK_F_TYPEECOD (1.6)
C [auth c]COX3e6ymxc1 A: alpha bundlesX: Cytochrome c oxidase subunit III-like (From Topology)H: Cytochrome c oxidase subunit III-like (From Topology)T: Cytochrome c oxidase subunit III-likeF: COX3ECOD (1.6)
D [auth d]COX5Be6ymxd1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: COX5BECOD (1.6)
E [auth e]COX4e6ymxe1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit IV (From Topology)H: Mitochondrial cytochrome c oxidase subunit IV (From Topology)T: Mitochondrial cytochrome c oxidase subunit IVF: COX4ECOD (1.6)
F [auth f]COX5Ae6ymxf1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Cytochrome c oxidase subunit E (From Topology)T: Cytochrome c oxidase subunit EF: COX5AECOD (1.6)
G [auth g]UNK_F_TYPEe6ymxg1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIaF: UNK_F_TYPEECOD (1.6)
H [auth h]UNK_F_TYPEe6ymxh1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)F: UNK_F_TYPEECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth a]PF00115Cytochrome C and Quinol oxidase polypeptide I (COX1)Cytochrome C and Quinol oxidase polypeptide I- Family
J [auth j]PF02297Cytochrome oxidase c subunit VIb (COX6B)Cytochrome oxidase c subunit VIbCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase.Domain
K [auth k]PF02046Cytochrome c oxidase subunit VIa (COX6A)Cytochrome c oxidase subunit VIa- Family
M [auth A],
V [auth L]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
M [auth A],
V [auth L]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
N [auth B],
W [auth M]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
O [auth C],
X [auth N]
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petD- Domain
O [auth C],
X [auth N]
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petB- Domain
P [auth D],
Y [auth O]
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
Q [auth E],
Z [auth P]
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
Q [auth E],
Z [auth P]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
R [auth F]PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
BA [auth R],
S [auth G]
PF02271Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD)Ubiquinol-cytochrome C reductase complex 14kD subunit- Family
B [auth b]PF00116Cytochrome C oxidase subunit II, periplasmic domain (COX2)Cytochrome C oxidase subunit II, periplasmic domain- Domain
B [auth b]PF02790Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM)Cytochrome C oxidase subunit II, transmembrane domain- Family
CA [auth S],
T [auth H]
PF02939UcrQ family (UcrQ)UcrQ family- Family
U [auth I]PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family
AA [auth Q]PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
DA [auth T]PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family
EA [auth U]PF09796Ubiquinol-cytochrome-c reductase complex subunit (QCR10) (QCR10)Ubiquinol-cytochrome-c reductase complex subunit (QCR10)- Family
FA [auth V]PF09796Ubiquinol-cytochrome-c reductase complex subunit (QCR10) (QCR10)Ubiquinol-cytochrome-c reductase complex subunit (QCR10)- Family
C [auth c]PF00510Cytochrome c oxidase subunit III (COX3)Cytochrome c oxidase subunit III- Family
D [auth d]PF01215Cytochrome c oxidase subunit Vb (COX5B)Cytochrome c oxidase subunit Vb- Domain
E [auth e]PF02936Cytochrome c oxidase subunit IV (COX4)Cytochrome c oxidase subunit IV- Family
F [auth f]PF02284Cytochrome c oxidase subunit Va (COX5A)Cytochrome c oxidase subunit VaCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit Va.Domain
G [auth g]PF02238Cytochrome c oxidase subunit VII (COX7a)Cytochrome c oxidase subunit VII- Family
H [auth h]PF02935Cytochrome c oxidase subunit VIIc (COX7C)Cytochrome c oxidase subunit VIIc- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth a]Cytochrome c oxidase subunit 1
J [auth j]Cytochrome c oxidase subunit 12, mitochondrial
K [auth k]Cytochrome c oxidase subunit 13, mitochondrial
L [auth m]Cytochrome c oxidase subunit 26, mitochondrial- -
M [auth A],
V [auth L]
Cytochrome b-c1 complex subunit 1, mitochondrial
N [auth B],
W [auth M]
Cytochrome b-c1 complex subunit 2, mitochondrial
O [auth C],
X [auth N]
Cytochrome b
P [auth D],
Y [auth O]
Cytochrome c1, heme protein, mitochondrial
Q [auth E],
Z [auth P]
Cytochrome b-c1 complex subunit Rieske, mitochondrial
R [auth F]Cytochrome b-c1 complex subunit 6, mitochondrial-
BA [auth R],
S [auth G]
Cytochrome b-c1 complex subunit 7, mitochondrial-
B [auth b]Cytochrome c oxidase subunit 2
CA [auth S],
T [auth H]
Cytochrome b-c1 complex subunit 8, mitochondrial-
U [auth I]Cytochrome b-c1 complex subunit 9, mitochondrial-
AA [auth Q]Cytochrome b-c1 complex subunit 6, mitochondrial-
DA [auth T]Cytochrome b-c1 complex subunit 9, mitochondrial-
EA [auth U]Cytochrome b-c1 complex subunit 10, mitochondrial-
FA [auth V]Cytochrome b-c1 complex subunit 10, mitochondrial-
C [auth c]Cytochrome c oxidase subunit 3
D [auth d]Cytochrome c oxidase subunit 4, mitochondrial
E [auth e]Cytochrome c oxidase subunit 5A, mitochondrial
F [auth f]Cytochrome c oxidase subunit 6, mitochondrial
G [auth g]Cytochrome c oxidase subunit 7, mitochondrial
H [auth h]Cytochrome c oxidase subunit 8, mitochondrial
I [auth i]Cytochrome c oxidase subunit 9, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth a]IPR036927Cytochrome c oxidase-like, subunit I superfamilyHomologous Superfamily
A [auth a]IPR000883Cytochrome c oxidase subunit IFamily
A [auth a]IPR023615Cytochrome c oxidase, subunit I, copper-binding siteBinding Site
A [auth a]IPR023616Cytochrome c oxidase-like, subunit I domainDomain
A [auth a]IPR033944Cytochrome c oxidase subunit I domainDomain
J [auth j]IPR036549Cytochrome c oxidase, subunit VIb superfamilyHomologous Superfamily
J [auth j]IPR048280Cytochrome oxidase c subunit VIb-likeFamily
J [auth j]IPR003213Cytochrome c oxidase, subunit VIbFamily
K [auth k]IPR018507Cytochrome c oxidase, subunit VIa, conserved siteConserved Site
K [auth k]IPR036418Cytochrome c oxidase, subunit VIa superfamilyHomologous Superfamily
K [auth k]IPR001349Cytochrome c oxidase, subunit VIaFamily
M [auth A],
V [auth L]
IPR007863Peptidase M16, C-terminalDomain
M [auth A],
V [auth L]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
M [auth A],
V [auth L]
IPR011765Peptidase M16, N-terminalDomain
N [auth B],
W [auth M]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
N [auth B],
W [auth M]
IPR011765Peptidase M16, N-terminalDomain
N [auth B],
W [auth M]
IPR001431Peptidase M16, zinc-binding siteBinding Site
O [auth C],
X [auth N]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
O [auth C],
X [auth N]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
O [auth C],
X [auth N]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
O [auth C],
X [auth N]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
O [auth C],
X [auth N]
IPR005798Cytochrome b/b6, C-terminalDomain
O [auth C],
X [auth N]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
O [auth C],
X [auth N]
IPR030689Cytochrome bFamily
O [auth C],
X [auth N]
IPR005797Cytochrome b/b6, N-terminal domainDomain
P [auth D],
Y [auth O]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
P [auth D],
Y [auth O]
IPR002326Cytochrome c1Family
P [auth D],
Y [auth O]
IPR009056Cytochrome c-like domainDomain
P [auth D],
Y [auth O]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
Q [auth E],
Z [auth P]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
Q [auth E],
Z [auth P]
IPR014349Rieske iron-sulphur proteinFamily
Q [auth E],
Z [auth P]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
Q [auth E],
Z [auth P]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
Q [auth E],
Z [auth P]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
Q [auth E],
Z [auth P]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
Q [auth E],
Z [auth P]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
R [auth F]IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
R [auth F]IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
BA [auth R],
S [auth G]
IPR003197Cytochrome b-c1 complex subunit 7Family
BA [auth R],
S [auth G]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
B [auth b]IPR011759Cytochrome C oxidase subunit II, transmembrane domainDomain
B [auth b]IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilyHomologous Superfamily
B [auth b]IPR034210Cytochrome c oxidase subunit 2, C-terminalDomain
B [auth b]IPR045187Cytochrome c/quinol oxidase subunit IIFamily
B [auth b]IPR002429Cytochrome c oxidase subunit II-like C-terminalDomain
B [auth b]IPR008972CupredoxinHomologous Superfamily
B [auth b]IPR001505Copper centre Cu(A)Binding Site
B [auth b]IPR014222Cytochrome c oxidase, subunit IIDomain
CA [auth S],
T [auth H]
IPR004205Cytochrome b-c1 complex subunit 8Family
CA [auth S],
T [auth H]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
U [auth I]IPR008027Cytochrome b-c1 complex subunit 9Family
U [auth I]IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
AA [auth Q]IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
AA [auth Q]IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
DA [auth T]IPR008027Cytochrome b-c1 complex subunit 9Family
DA [auth T]IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
EA [auth U]IPR019182Cytochrome b-c1 complex subunit 10, fungiFamily
FA [auth V]IPR019182Cytochrome b-c1 complex subunit 10, fungiFamily
C [auth c]IPR035973Cytochrome c oxidase subunit III-like superfamilyHomologous Superfamily
C [auth c]IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleHomologous Superfamily
C [auth c]IPR000298Cytochrome c oxidase subunit III-likeDomain
C [auth c]IPR033945Cytochrome c oxidase subunit III domainDomain
C [auth c]IPR024791Cytochrome c oxidase subunit IIIFamily
D [auth d]IPR002124Cytochrome c oxidase, subunit VbFamily
D [auth d]IPR036972Cytochrome c oxidase, subunit Vb superfamilyHomologous Superfamily
E [auth e]IPR004203Cytochrome c oxidase subunit IV familyFamily
E [auth e]IPR036639Cytochrome c oxidase subunit IV superfamilyHomologous Superfamily
F [auth f]IPR003204Cytochrome c oxidase, subunit Va/VIFamily
F [auth f]IPR036545Cytochrome c oxidase, subunit Va/VI superfamilyHomologous Superfamily
G [auth g]IPR014367Cytochrome c oxidase subunit VII, budding yeastFamily
G [auth g]IPR039297Cytochrome c oxidase subunit VIIFamily
H [auth h]IPR036636Cytochrome c oxidase subunit VIIc superfamilyHomologous Superfamily
H [auth h]IPR004202Cytochrome c oxidase subunit VIIcFamily
I [auth i]IPR014368Cytochrome c oxidase, subunit VIIa, fungalFamily