Annotations: 6YKM

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G	MIF	e6ykmG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: MIF	ECOD (v295)
F	Ribosomal_L17	e6ykmF01	A: alpha arrays	X: Histone-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F: Ribosomal_L17	ECOD (v295)
E		e6ykmE1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F:	ECOD (v295)
D		e6ykmD1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F:	ECOD (v295)
C		e6ykmC1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F:	ECOD (v295)
B		e6ykmB1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F:	ECOD (v295)
A	MotA_ExbB	e6ykmA1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: MotA_ExbB	ECOD (v295)

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
F, G	Chemotaxis protein MotB, putative	-	-	cell periphery cellular anatomical structure plasma membrane membrane
A, B, C, D, E	Chemotaxis protein MotA, putative	-	chemotaxis response to stimulus taxis response to chemical response to external stimulus locomotion bacterial-type flagellum-dependent swarming motility bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	cell periphery cellular anatomical structure plasma membrane membrane

Chains	Accession	Name	Type
F, G	IPR006665	OmpA-like domain	Domain
F, G	IPR025713	Motility protein B-like, N-terminal domain	Domain
F, G	IPR050330	Bacterial Outer Membrane Structural/Functional	Family
F, G	IPR036737	OmpA-like domain superfamily	Homologous Superfamily
A, B, C, D, E	IPR047055	Motility protein A-like	Family
A, B, C, D, E	IPR002898	MotA/TolQ/ExbB proton channel	Domain
A, B, C, D, E	IPR000540	Flagellar motor protein MotA, conserved site	Conserved Site

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E A, B, C, D, E, F, G	OPM	Transmembrane	Alpha-helical polytopic	MotA/TolQ/ExbB channel	MotA/TolQ/ExbB channel

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G	PDBTM	Annotated as membrane protein by PDBTM

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G	MemProtMD	Annotated as membrane protein by MemProtMD

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F, G	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Flagellar Motor Proteins	MotAB stator units

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6YKM | pdb_00006ykm