Annotations: 6YF5

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	PF03271	e6yf5C1	A: alpha duplicates or obligate multimers	X: EB1 dimerisation domain-like (From Topology)	H: EB1 dimerisation domain-like (From Topology)	T: EB1 dimerisation domain-like	F: PF03271	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF03271	EB1-like C-terminal motif (EB1)	EB1-like C-terminal motif	-	Family
A, B, C, D	PF00038	Intermediate filament protein (Filament)	Intermediate filament protein	-	Coiled-coil

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Prelamin-A/C,Microtubule-associated protein RP/EB family member 1	RNA binding binding organic cyclic compound binding nucleic acid binding protein binding kinase binding enzyme binding protein kinase binding cell adhesion molecule binding cadherin binding molecular adaptor activity cytoskeletal protein binding microtubule plus-end binding microtubule binding RNA binding binding organic cyclic compound binding nucleic acid binding protein binding kinase binding enzyme binding protein kinase binding cell adhesion molecule binding cadherin binding molecular adaptor activity cytoskeletal protein binding microtubule plus-end binding microtubule binding tubulin binding identical protein binding structural constituent of cytoskeleton structural molecule activity	cellular component organization microtubule bundle formation organelle organization microtubule cytoskeleton organization cellular process microtubule-based process cellular component organization or biogenesis cytoskeleton organization protein localization localization cellular localization cellular macromolecule localization macromolecule localization protein localization to microtubule cytoskeleton cellular component organization microtubule bundle formation organelle organization microtubule cytoskeleton organization cellular process microtubule-based process cellular component organization or biogenesis cytoskeleton organization protein localization localization cellular localization cellular macromolecule localization macromolecule localization protein localization to microtubule cytoskeleton protein localization to microtubule organizing center protein localization to cytoskeleton protein localization to organelle protein localization to centrosome regulation of cytoskeleton organization regulation of microtubule polymerization or depolymerization regulation of cellular component organization regulation of cellular process negative regulation of biological process cellular component biogenesis regulation of protein-containing complex assembly cellular component assembly microtubule polymerization or depolymerization negative regulation of cellular process protein-containing complex assembly negative regulation of protein polymerization negative regulation of supramolecular fiber organization protein polymerization regulation of biological process negative regulation of cellular component organization negative regulation of microtubule polymerization or depolymerization protein-containing complex organization negative regulation of cytoskeleton organization biological regulation regulation of microtubule-based process negative regulation of microtubule polymerization microtubule polymerization regulation of cellular component biogenesis regulation of organelle organization negative regulation of protein-containing complex assembly negative regulation of organelle organization regulation of protein polymerization regulation of microtubule polymerization regulation of supramolecular fiber organization supramolecular fiber organization regulation of microtubule cytoskeleton organization establishment of organelle localization mitotic metaphase chromosome alignment mitotic cell cycle metaphase chromosome alignment chromosome localization organelle localization establishment of localization in cell mitotic sister chromatid segregation cell cycle chromosome segregation cell cycle process mitotic nuclear division attachment of spindle microtubules to kinetochore organelle fission attachment of mitotic spindle microtubules to kinetochore chromosome organization sister chromatid segregation establishment of localization nuclear division mitotic cell cycle process nuclear chromosome segregation establishment of chromosome localization cell division cell migration cell motility organelle assembly non-membrane-bounded organelle assembly spindle assembly spindle organization plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cilium assembly non-motile cilium assembly cilium organization cell projection assembly protein localization to astral microtubule protein localization to microtubule protein localization to cytoplasmic microtubule protein localization to spindle microtubule spindle localization establishment or maintenance of cell polarity establishment of mitotic spindle localization establishment of spindle localization establishment of spindle orientation microtubule cytoskeleton organization involved in mitosis establishment of cell polarity establishment of mitotic spindle orientation positive regulation of organelle organization positive regulation of cellular component organization positive regulation of biological process positive regulation of protein-containing complex assembly positive regulation of protein polymerization positive regulation of cellular process positive regulation of microtubule polymerization or depolymerization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization positive regulation of supramolecular fiber organization positive regulation of microtubule polymerization nuclear pore localization nucleus organization localization within membrane protein-containing complex localization membrane organization nuclear envelope organization endomembrane system organization cellular biosynthetic process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process organic substance metabolic process positive regulation of biosynthetic process organic substance biosynthetic process positive regulation of macromolecule metabolic process regulation of biosynthetic process cellular metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular biosynthetic process response to decreased oxygen levels cellular response to stimulus response to stimulus cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus cellular response to stress response to hypoxia response to stress response to chemical response to oxygen levels response to abiotic stimulus transport nucleus localization intracellular transport nuclear migration developmental process muscle structure development animal organ development anatomical structure development muscle organ development protein localization to nucleus protein localization to nuclear envelope establishment of protein localization nitrogen compound transport nucleocytoplasmic transport nuclear transport organic substance transport import into nucleus establishment of protein localization to organelle protein transport protein import into nucleus intracellular protein transport regulation of telomere maintenance telomere organization regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process primary metabolic process regulation of chromosome organization DNA metabolic process nucleic acid metabolic process telomere maintenance organic cyclic compound metabolic process regulation of DNA metabolic process regulation of cell motility regulation of locomotion regulation of cell migration locomotion cellular senescence negative regulation of cell population proliferation cell population proliferation regulation of mesenchymal cell proliferation regulation of cell population proliferation mesenchymal cell proliferation negative regulation of mesenchymal cell proliferation regulation of localization regulation of protein localization regulation of protein localization to nucleus regulation of cellular localization DNA double-strand break attachment to nuclear envelope chromosome attachment to the nuclear envelope regulation of protein stability regulation of biological quality ventricular cardiac muscle cell differentiation multicellular organismal process cellular developmental process cardiac muscle cell development cell development muscle cell differentiation striated muscle tissue development multicellular organism development muscle cell development cell differentiation muscle tissue development cardiac cell development system development heart development cardiac muscle tissue development cardiac muscle cell differentiation tissue development ventricular cardiac muscle cell development cardiocyte differentiation circulatory system development striated muscle cell differentiation signaling negative regulation of signaling apoptotic mitochondrial changes regulation of signal transduction regulation of release of cytochrome c from mitochondria regulation of programmed cell death negative regulation of cell communication cell communication negative regulation of release of cytochrome c from mitochondria negative regulation of apoptotic signaling pathway signal transduction mitochondrion organization regulation of signaling negative regulation of response to stimulus negative regulation of programmed cell death regulation of apoptotic process cell death negative regulation of signal transduction apoptotic signaling pathway release of cytochrome c from mitochondria negative regulation of apoptotic process regulation of response to stimulus regulation of mitochondrion organization regulation of cell communication apoptotic process programmed cell death regulation of apoptotic signaling pathway establishment or maintenance of microtubule cytoskeleton polarity establishment or maintenance of cytoskeleton polarity negative regulation of cellular metabolic process protein-DNA complex organization chromatin organization chromatin remodeling negative regulation of macromolecule metabolic process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process negative regulation of cellular biosynthetic process negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of gene expression, epigenetic negative regulation of muscle adaptation system process striated muscle adaptation negative regulation of muscle hypertrophy regulation of system process regulation of muscle hypertrophy regulation of cardiac muscle hypertrophy in response to stress muscle adaptation cardiac muscle adaptation regulation of response to stress cardiac muscle hypertrophy regulation of multicellular organismal process cardiac muscle hypertrophy in response to stress muscle hypertrophy regulation of muscle adaptation negative regulation of cardiac muscle hypertrophy in response to stress striated muscle hypertrophy regulation of muscle system process muscle system process regulation of cardiac muscle hypertrophy negative regulation of cardiac muscle adaptation negative regulation of multicellular organismal process regulation of cardiac muscle adaptation negative regulation of cardiac muscle hypertrophy muscle hypertrophy in response to stress extrinsic apoptotic signaling pathway negative regulation of extrinsic apoptotic signaling pathway cell surface receptor signaling pathway regulation of extrinsic apoptotic signaling pathway	anchoring junction cell junction cellular anatomical entity focal adhesion cell-substrate junction intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle intracellular non-membrane-bounded organelle spindle midzone microtubule cytoskeleton non-membrane-bounded organelle anchoring junction cell junction cellular anatomical entity focal adhesion cell-substrate junction intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle intracellular non-membrane-bounded organelle spindle midzone microtubule cytoskeleton non-membrane-bounded organelle centrosome microtubule organizing center polymeric cytoskeletal fiber mitotic spindle aster spindle microtubule cytoplasmic microtubule mitotic spindle astral microtubule end supramolecular polymer supramolecular complex microtubule end mitotic spindle astral microtubule astral microtubule supramolecular fiber cytoplasm microtubule microtubule plus-end cytosol cell periphery cell projection membrane plasma membrane plasma membrane region cell projection membrane plasma membrane bounded cell projection membrane-bounded organelle Golgi apparatus intracellular membrane-bounded organelle endomembrane system cell cortex cortical cytoskeleton cortical microtubule cytoskeleton mitotic spindle pole spindle pole cilium ciliary basal body nucleus membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen nuclear matrix organelle envelope nuclear envelope nuclear speck nuclear body nucleoplasm nuclear membrane organelle membrane intermediate filament cytoskeleton intermediate filament lamin filament nuclear lamina perinuclear region of cytoplasm site of double-strand break site of DNA damage chromosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001715	Calponin homology domain	Domain
A, B, C, D	IPR004953	EB1, C-terminal	Domain
A, B, C, D	IPR027328	Microtubule-associated protein RP/EB	Family
A, B, C, D	IPR036133	EB1, C-terminal domain superfamily	Homologous Superfamily
A, B, C, D	IPR036872	CH domain superfamily	Homologous Superfamily
A, B, C, D	IPR018039	Intermediate filament protein, conserved site	Conserved Site
A, B, C, D	IPR036415	Lamin tail domain superfamily	Homologous Superfamily
A, B, C, D	IPR039008	Intermediate filament, rod domain	Domain
A, B, C, D	IPR001322	Lamin tail domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D	Pharos: P02545	Weight Gain primitive neuroectodermal tumor astrocytic tumor coronary artery disease inflammatory bowel disease lymphoplasmacytic lymphoma medulloblastoma oligodendroglioma plasma cell myeloma atypical teratoid rhabdoid tumor dermatomyositis juvenile dermatomyositis malignant ependymoma myocardial ischemia osteosarcoma Weight Gain primitive neuroectodermal tumor astrocytic tumor coronary artery disease inflammatory bowel disease lymphoplasmacytic lymphoma medulloblastoma oligodendroglioma plasma cell myeloma atypical teratoid rhabdoid tumor dermatomyositis juvenile dermatomyositis malignant ependymoma myocardial ischemia osteosarcoma polycystic ovary syndrome breast carcinoma glioblastoma large cell medulloblastoma malignant glioma nicotine dependence ovarian cancer Hutchinson-Gilford progeria syndrome limb-girdle muscular dystrophy Emery-Dreifuss muscular dystrophy congenital muscular dystrophy due to LMNA mutation dilated cardiomyopathy-hypergonadotropic hypogonadism syndrome Charcot-Marie-Tooth disease dilated cardiomyopathy heart-hand syndrome, Slovenian type Charcot-Marie-Tooth disease type 2B1 left ventricular noncompaction familial partial lipodystrophy lethal restrictive dermopathy localized scleroderma Emery-Dreifuss muscular dystrophy 3, autosomal recessive mandibuloacral dysplasia with type A lipodystrophy myopathy congenital muscular dystrophy ventricular tachycardia arrhythmogenic right ventricular cardiomyopathy polycystic ovary syndrome sinoatrial block dilated cardiomyopathy 1A Emery-Dreifuss muscular dystrophy 2, autosomal dominant familial partial lipodystrophy, Dunnigan type atrioventricular block atypical Werner syndrome scleroderma Craniofacial Abnormalities cardiomyopathy peripheral neuropathy Werner syndrome linear scleroderma Sjogren syndrome diabetes mellitus lung carcinoma tuberculosis malignant pancreatic neoplasm X-linked Emery-Dreifuss muscular dystrophy muscle tissue disease glioblastoma osteosarcoma autosomal recessive Emery-Dreifuss muscular dystrophy heart disease peripheral nervous system disease plasma cell myeloma laminopathy type Decaudain-Vigouroux psoriasis lipodystrophy subependymal giant cell astrocytoma lung adenocarcinoma testicular cancer malignant ependymoma familial atrial fibrillation MALT lymphoma muscular disease atrioventricular dissociation neurodegenerative disease ovarian cancer hypertrophic cardiomyopathy sarcoidosis LMNA-related cardiocutaneous progeria syndrome sudden cardiac arrest lung cancer testicular germ cell tumor malignant glioma arthrogryposis motor peripheral neuropathy muscular dystrophy atypical teratoid rhabdoid tumor gastric carcinoma osteogenesis imperfecta pancreatic ductal adenocarcinoma cerebrovascular disorder pilocytic astrocytoma chronic obstructive pulmonary disease intellectual disability

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.