6YDW

55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
HB [auth Aj]SCOP2 FamilyMitochondrial 28S ribosomal protein S34-like 8104444 4004136 SCOP2 (2022-06-29)
HB [auth Aj]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8104445 3000334 SCOP2 (2022-06-29)
L [auth Be]SCOP2 FamilyMitochondrial ribosomal protein L27-like 8096621 4004579 SCOP2 (2022-06-29)
L [auth Be]SCOP2 SuperfamilyMitochondrial ribosomal protein L27-like 8096622 3002240 SCOP2 (2022-06-29)
XA [auth Aa]SCOP2 FamilyMRP-S22-like 8096619 4007491 SCOP2 (2022-06-29)
XA [auth Aa]SCOP2 SuperfamilyMitochondrial 28S ribosomal protein S22-like 8096620 3002074 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
K [auth Bd]MRP-L28e6ydwBd1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: MRP-L28ECOD (1.6)
O [auth Bh]Ribonucleas_3_3e6ydwBh1 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: Ribonucleas_3_3ECOD (1.6)
O [auth Bh]dsrme6ydwBh2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: dsrmECOD (1.6)
P [auth Bi]Tim44e6ydwBi1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: Tim44ECOD (1.6)
T [auth Bm]Ribosomal_L50e6ydwBm1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: Ribosomal_L50ECOD (1.6)
QA [auth AQ]Ribosomal_S17_1e6ydwAQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
BB [auth Ae]H2O2_YaaD,MRP-S27e6ydwAe1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: H2O2_YaaD,MRP-S27ECOD (1.6)
FB [auth Ah]MRP-S31e6ydwAh1 A: extended segmentsX: Mitoribosomal protein mS31 (From Topology)H: Mitoribosomal protein mS31 (From Topology)T: Mitoribosomal protein mS31F: MRP-S31ECOD (1.6)
GB [auth Ai]MRP-S33e6ydwAi1 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: MRP-S33ECOD (1.6)
HB [auth Aj]MRP-S34e6ydwAj1 A: beta barrelsX: SH3H: Mitoribosomal protein mS34 (From Topology)T: Mitoribosomal protein mS34F: MRP-S34ECOD (1.6)
WB [auth B4]Mitoc_L55e6ydwB41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Mitoc_L55ECOD (1.6)
GC [auth BE]Ribosomal_L3e6ydwBE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
IC [auth BI]Ribosomal_L9_N_1e6ydwBI1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_N_1ECOD (1.6)
NC [auth BP]Ribosomal_L27Ae6ydwBP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
A [auth AI]Ribosomal_S9e6ydwAI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
J [auth Bc]TGSe6ydwBc2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TGSECOD (1.6)
J [auth Bc]tRNA_SADe6ydwBc1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: tRNA_SADECOD (1.6)
L [auth Be]MRP-L27e6ydwBe1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: MRP-L27ECOD (1.6)
M [auth Bf]MRP-S32e6ydwBf1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: MRP-S32ECOD (1.6)
N [auth Bg]L51_S25_CI-B8e6ydwBg1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
Q [auth Bj]MRP-L46e6ydwBj1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: MRP-L46ECOD (1.6)
R [auth Bk]Ribosomal_S10_2e6ydwBk1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_2ECOD (1.6)
S [auth Bl]Img2e6ydwBl1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: Img2ECOD (1.6)
B [auth BT]Ribosomal_L19e6ydwBT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
U [auth Bn]MRP-L51e6ydwBn1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: MRP-L51ECOD (1.6)
V [auth Bo]EUF08791e6ydwBo1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: EUF08791ECOD (1.6)
W [auth Bp]MRP_L53e6ydwBp1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: MRP_L53ECOD (1.6)
Y [auth Bt]MRP-63e6ydwBt1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: MRP-63ECOD (1.6)
Z [auth Bu]RF-1_Ne6ydwBu1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_NECOD (1.6)
AA [auth Bv]CR6_interacte6ydwBv1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: CR6_interactECOD (1.6)
BA [auth B0]Ribosomal_L27e6ydwB01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
CA [auth Bw]PDCD9e6ydwBw1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
C [auth BU]Ribosomal_L20e6ydwBU1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
DA [auth Bx]Ribosomal_S18e6ydwBx1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
FA [auth AB]Ribosomal_S2_1e6ydwAB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_1ECOD (1.6)
GA [auth AC]MRP-S24e6ydwAC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: MRP-S24ECOD (1.6)
HA [auth AE]Ribosomal_S5_Ce6ydwAE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
HA [auth AE]Ribosomal_S5_1e6ydwAE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_1ECOD (1.6)
HA [auth AE]KOG2646e6ydwAE3 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: KOG2646ECOD (1.6)
IA [auth AF]Ribosomal_S6_1e6ydwAF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6_1ECOD (1.6)
JA [auth AG]Ribosomal_S7e6ydwAG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7ECOD (1.6)
KA [auth AJ]Ribosomal_S10_2e6ydwAJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_2ECOD (1.6)
LA [auth AK]Ribosomal_S11e6ydwAK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
MA [auth AL]Ribosom_S12_S23e6ydwAL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
D [auth BV]Ribosomal_L21pe6ydwBV1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
NA [auth AN]Ribosomal_S14_1e6ydwAN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
OA [auth AO]Ribosomal_S15_1e6ydwAO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
PA [auth AP]Ribosomal_S16e6ydwAP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
RA [auth AR]Ribosomal_S18e6ydwAR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
SA [auth AU]Ribosomal_S21_2e6ydwAU1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: Ribosomal_S21_2ECOD (1.6)
XA [auth Aa]MRP-S22e6ydwAa1 A: a+b complex topologyX: Mitoribosomal protein mS22 (From Topology)H: Mitoribosomal protein mS22 (From Topology)T: Mitoribosomal protein mS22F: MRP-S22ECOD (1.6)
E [auth BW]Ribosomal_L22e6ydwBW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
YA [auth Ab]MRP-S23e6ydwAb1 A: alpha arraysX: RuvA-CH: Mitoribosomal protein mS23 (From Topology)T: Mitoribosomal protein mS23F: MRP-S23ECOD (1.6)
ZA [auth Ac]L51_S25_CI-B8e6ydwAc1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
AB [auth Ad]MRP-S26e6ydwAd1 A: extended segmentsX: Mitoribosomal protein mS26 (From Topology)H: Mitoribosomal protein mS26 (From Topology)T: Mitoribosomal protein mS26F: MRP-S26ECOD (1.6)
CB [auth B1]Ribosomal_L28_1e6ydwB11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Mitoribosomal protein bL28mF: Ribosomal_L28_1ECOD (1.6)
DB [auth Af]MRP-S35e6ydwAf1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: MRP-S35ECOD (1.6)
EB [auth Ag]DAP3_Ce6ydwAg2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: DAP3_CECOD (1.6)
EB [auth Ag]DAP3_Ne6ydwAg1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DAP3_NECOD (1.6)
F [auth BX]Ribosomal_L23_2e6ydwBX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
IB [auth Ak]UNK_F_TYPEe6ydwAk1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: UNK_F_TYPEECOD (1.6)
JB [auth Am]KOG4695e6ydwAm1 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: KOG4695ECOD (1.6)
KB [auth An]DUF1713e6ydwAn1 A: extended segmentsX: Mitoribosomal protein mS38 (From Topology)H: Mitoribosomal protein mS38 (From Topology)T: Mitoribosomal protein mS38F: DUF1713ECOD (1.6)
MB [auth Ap]Ribosomal_S18e6ydwAp1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
NB [auth CL]Ribosomal_L12_N_1e6ydwCL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
OB [auth DL]Ribosomal_L12_N_1e6ydwDL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
PB [auth EL]Ribosomal_L12_N_1e6ydwEL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
QB [auth FL]Ribosomal_L12_N_1e6ydwFL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
RB [auth GL]Ribosomal_L12_N_1e6ydwGL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
SB [auth HL]Ribosomal_L12_N_1e6ydwHL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
TB [auth LL]Ribosomal_L12e6ydwLL1 A: a+b two layersX: ClpS-likeH: ClpS-related (From Topology)T: ClpS-relatedF: Ribosomal_L12ECOD (1.6)
UB [auth B2]MRP-L47e6ydwB21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: MRP-L47ECOD (1.6)
VB [auth B3]Ribosomal_L30e6ydwB31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
XB [auth B5]KOG4080e6ydwB51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: KOG4080ECOD (1.6)
G [auth BY]ribosomal_L24_1e6ydwBY1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
YB [auth B6]Ribosomal_L33e6ydwB61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
ZB [auth B7]Ribosomal_L34e6ydwB71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
AC [auth B8]Ribosomal_L35pe6ydwB81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
BC [auth B9]Ribosomal_L36e6ydwB91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
EC [auth BC]GTP_EFTU_D2e6ydwBC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2ECOD (1.6)
EC [auth BC]EFG_IVe6ydwBC5 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: EFG_IVECOD (1.6)
EC [auth BC]EFG_Ce6ydwBC3 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_CECOD (1.6)
EC [auth BC]EFG_IIe6ydwBC2 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_IIECOD (1.6)
EC [auth BC]MnmE_helical_2nde6ydwBC4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
FC [auth BD]Ribosomal_L2e6ydwBD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2ECOD (1.6)
FC [auth BD]Ribosomal_L2_Ce6ydwBD2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
HC [auth BF]Ribosomal_L4e6ydwBF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
H [auth Ba]PDCD9e6ydwBa1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
KC [auth BK]Ribosomal_L11e6ydwBK2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
KC [auth BK]Ribosomal_L11_Ne6ydwBK1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
LC [auth BN]Ribosomal_L13e6ydwBN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
MC [auth BO]Ribosomal_L14e6ydwBO1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
OC [auth BQ]Ribosomal_L16e6ydwBQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
PC [auth BR]Ribosomal_L17e6ydwBR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17ECOD (1.6)
QC [auth BS]Ribosomal_L18pe6ydwBS1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
I [auth Bb]PBPe6ydwBb1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
QA [auth AQ]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
GC [auth BE]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
IC [auth BI]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
IC [auth BI]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
NC [auth BP]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
A [auth AI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
A [auth AI]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
B [auth BT]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
B [auth BT]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
C [auth BU]PF00472RF-1 domain (RF-1)RF-1 domain- Family
C [auth BU]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
CC [auth BA],
EA [auth AA]
PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
CC [auth BA],
EA [auth AA]
PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
FA [auth AB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
FA [auth AB]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family
GA [auth AC]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
GA [auth AC]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
HA [auth AE]PF10037Mitochondrial 28S ribosomal protein S27 (MRP-S27)Mitochondrial 28S ribosomal protein S27- Repeat
HA [auth AE]PF21251Small ribosomal subunit protein uS5m, N-terminal (Ribosomal_uS5m_N)Small ribosomal subunit protein uS5m, N-terminalThis entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the m ...This entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].
Domain
HA [auth AE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
HA [auth AE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
JA [auth AG]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
JA [auth AG]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
KA [auth AJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
KA [auth AJ]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
LA [auth AK]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
LA [auth AK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
MA [auth AL]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
D [auth BV]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
NA [auth AN]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
OA [auth AO]PF22330Small ribosomal subunit protein mS39, PPR (Rib_mS39_PPR)Small ribosomal subunit protein mS39, PPR- Repeat
OA [auth AO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
PA [auth AP]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
PA [auth AP]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
RA [auth AR]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
SA [auth AU]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
E [auth BW]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
CB [auth B1]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
F [auth BX]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1].Domain
PF00542Ribosomal protein L7/L12 C-terminal domain (Ribosomal_L12)Ribosomal protein L7/L12 C-terminal domain- Domain
UB [auth B2]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
VB [auth B3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
XB [auth B5]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
G [auth BY]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
G [auth BY]PF00467KOW motif (KOW)KOW motif- Family
ZB [auth B7]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
BC [auth B9]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
EC [auth BC]PF00679Elongation factor G C-terminus (EFG_C)Elongation factor G C-terminusThis domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold.Domain
EC [auth BC]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
EC [auth BC]PF14492Elongation Factor G, domain III (EFG_III)Elongation Factor G, domain IIIThis domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1].Domain
EC [auth BC]PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain
EC [auth BC]PF03764Elongation factor G, domain IV (EFG_IV)Elongation factor G, domain IVThis domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold.Domain
FC [auth BD]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
HC [auth BF]PF10210Mitochondrial 28S ribosomal protein S32 (MRP-S32)Mitochondrial 28S ribosomal protein S32- Family
HC [auth BF]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
JC [auth BJ]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
JC [auth BJ]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
KC [auth BK]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
KC [auth BK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
LC [auth BN]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
LC [auth BN]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
MC [auth BO]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
MC [auth BO]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
OC [auth BQ]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
OC [auth BQ]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
PC [auth BR]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
QC [auth BS]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
K [auth Bd]Uncharacterized protein- -
O [auth Bh]Uncharacterized protein
P [auth Bi]Mitochondrial ribosomal protein L45- -
T [auth Bm]Mitochondrial ribosomal protein L50- -
QA [auth AQ]uS17m
TA [auth AV],
VA [auth AY]
tRNAMet---
BB [auth Ae]Mitochondrial ribosomal protein S27- -
FB [auth Ah]Mitochondrial ribosomal protein S31 -
GB [auth Ai]mS33- -
HB [auth Aj]mS34
WB [auth B4]Uncharacterized protein -
GC [auth BE]ICT1
IC [auth BI]Mitochondrial ribosomal protein L9
NC [auth BP]Uncharacterized protein---
A [auth AI]Uncharacterized protein
J [auth Bc]Mitochondrial ribosomal protein L39 - -
L [auth Be]Mitochondrial ribosomal protein L41
M [auth Bf]Uncharacterized protein- -
N [auth Bg]Mitochondrial ribosomal protein L43
Q [auth Bj]Mitochondrial ribosomal protein L46 -
R [auth Bk]39S ribosomal protein L48, mitochondrial- -
S [auth Bl]Mrpl34
B [auth BT]Mitochondrial ribosomal protein L19
U [auth Bn]Mitochondrial ribosomal protein L51
V [auth Bo]Uncharacterized protein
W [auth Bp]mL53- -
X [auth Bq]Uncharacterized protein -
Y [auth Bt]Mitochondrial ribosomal protein L57
Z [auth Bu]Uncharacterized protein
AA [auth Bv]Uncharacterized protein- -
BA [auth B0]Mitochondrial ribosomal protein L27
CA [auth Bw]39S ribosomal protein S30, mitochondrial
C [auth BU]Mitochondrial ribosomal protein L20
DA [auth Bx]Mitochondrial ribosomal protein S18A
CC [auth BA],
EA [auth AA]
12S rRNA---
FA [auth AB]Mitochondrial ribosomal protein S2
GA [auth AC]Mitochondrial ribosomal protein S24- -
HA [auth AE]Mitochondrial ribosomal protein S5
IA [auth AF]Uncharacterized protein---
JA [auth AG]Mitochondrial ribosomal protein S7
KA [auth AJ]Mitochondrial ribosomal protein S10- -
LA [auth AK]uS11m
MA [auth AL]Mitochondrial ribosomal protein S12
D [auth BV]Mitochondrial ribosomal protein L21
NA [auth AN]Mitochondrial ribosomal protein S14
OA [auth AO]uS15m
PA [auth AP]28S ribosomal protein S16, mitochondrial
RA [auth AR]Mitochondrial ribosomal protein S18C
SA [auth AU]bS21m
UA [auth AX]mRNA---
WA [auth AZ]unknown peptide---
XA [auth Aa]Mitochondrial ribosomal protein S22 -
E [auth BW]Uncharacterized protein
YA [auth Ab]mS23
ZA [auth Ac]Mitochondrial ribosomal protein S25 -
AB [auth Ad]Mitochondrial ribosomal protein S26 -
CB [auth B1]Mitochondrial ribosomal protein L28 -
DB [auth Af]Mitoribosomal protein ms28, mrps28-
EB [auth Ag]Death associated protein 3-
F [auth BX]Uncharacterized protein---
IB [auth Ak]Mitochondrial ribosomal protein S35
JB [auth Am]mS37-
KB [auth An]Aurora kinase A interacting protein 1-
LB [auth Ao]mS39
MB [auth Ap]28S ribosomal protein S18b, mitochondrial
Mitochondrial ribosomal protein L12
UB [auth B2]Mitochondrial ribosomal protein L47
VB [auth B3]Uncharacterized protein
XB [auth B5]Uncharacterized protein
G [auth BY]Uncharacterized protein
YB [auth B6]Uncharacterized protein
ZB [auth B7]Mitochondrial ribosomal protein L34
AC [auth B8]Mitochondrial ribosomal protein L35- -
BC [auth B9]Ribosomal protein
DC [auth BB]CP tRNA-Phe---
EC [auth BC]Elongation factor G, mitochondrial
FC [auth BD]Uncharacterized protein
HC [auth BF]Mitochondrial ribosomal protein L4
H [auth Ba]Mitochondrial ribosomal protein L37
JC [auth BJ]Mitochondrial ribosomal protein L10- -
KC [auth BK]Mitochondrial ribosomal protein L11
LC [auth BN]Uncharacterized protein
MC [auth BO]Uncharacterized protein
OC [auth BQ]Uncharacterized protein
PC [auth BR]Uncharacterized protein
QC [auth BS]Mitochondrial ribosomal protein L18
I [auth Bb]Mitochondrial ribosomal protein L38- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
K [auth Bd]IPR019192Large ribosomal subunit protein mL40Family
K [auth Bd]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
O [auth Bh]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
O [auth Bh]IPR014720Double-stranded RNA-binding domainDomain
O [auth Bh]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
P [auth Bi]IPR032710NTF2-like domain superfamilyHomologous Superfamily
P [auth Bi]IPR007379Tim44-like domainDomain
P [auth Bi]IPR051975Mitochondrial Large Ribosomal Subunit mL45Family
T [auth Bm]IPR018305Large ribosomal subunit protein mL50Family
QA [auth AQ]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
QA [auth AQ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QA [auth AQ]IPR000266Small ribosomal subunit protein uS17Family
BB [auth Ae]IPR019266Small ribosomal subunit protein mS27Family
BB [auth Ae]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
BB [auth Ae]IPR034913mS27/PTCD2Family
BB [auth Ae]IPR002885Pentatricopeptide repeatRepeat
FB [auth Ah]IPR026299Mitochondrial 28S ribosomal protein S31Family
GB [auth Ai]IPR013219Small ribosomal subunit protein mS33Family
HB [auth Aj]IPR032053Small ribosomal subunit protein mS34Family
WB [auth B4]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
WB [auth B4]IPR018615Large ribosomal subunit protein mL55Family
GC [auth BE]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
GC [auth BE]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
GC [auth BE]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
GC [auth BE]IPR000597Large ribosomal subunit protein uL3Family
IC [auth BI]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
IC [auth BI]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
IC [auth BI]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
IC [auth BI]IPR000244Large ribosomal subunit protein bL9Family
A [auth AI]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
A [auth AI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
A [auth AI]IPR000754Small ribosomal subunit protein uS9Family
A [auth AI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
J [auth Bc]IPR012676TGS-likeHomologous Superfamily
J [auth Bc]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
J [auth Bc]IPR050062Proline-tRNA synthetaseFamily
J [auth Bc]IPR004095TGSDomain
J [auth Bc]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
L [auth Be]IPR019189Large ribosomal subunit protein mL41Family
M [auth Bf]IPR019346Large ribosomal subunit protein mL42Family
N [auth Bg]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
N [auth Bg]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
N [auth Bg]IPR039927Large ribosomal subunit protein mL43Family
Q [auth Bj]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
Q [auth Bj]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
Q [auth Bj]IPR040008Large ribosomal subunit protein mL46Family
Q [auth Bj]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
R [auth Bk]IPR027486Small ribosomal subunit protein uS10 domainDomain
R [auth Bk]IPR027487Large ribosomal subunit protein mL48Family
R [auth Bk]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
S [auth Bl]IPR007740Large ribosomal subunit protein mL49Family
B [auth BT]IPR001857Large ribosomal subunit protein bL19Family
B [auth BT]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
B [auth BT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth Bn]IPR019373Large ribosomal subunit protein mL51Family
V [auth Bo]IPR034596Large ribosomal subunit protein mL52Family
W [auth Bp]IPR019716Large ribosomal subunit protein mL53Family
W [auth Bp]IPR052473Mitochondrial Large Ribosomal Subunit mL53Family
X [auth Bq]IPR013870Large ribosomal subunit protein mL54Family
Y [auth Bt]IPR016576Large ribosomal subunit protein mL63Family
Z [auth Bu]IPR000352Peptide chain release factor class IDomain
Z [auth Bu]IPR052104Mitochondrial Release Factor mL62Family
AA [auth Bv]IPR018472Large ribosomal subunit protein mL64Family
AA [auth Bv]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
BA [auth B0]IPR001684Large ribosomal subunit protein bL27Family
CA [auth Bw]IPR039982Large ribosomal subunit protein mL65Family
CA [auth Bw]IPR010793Large ribosomal subunit protein mL37/mL65Family
C [auth BU]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
C [auth BU]IPR005813Large ribosomal subunit protein bL20Family
DA [auth Bx]IPR001648Small ribosomal subunit protein bS18Family
DA [auth Bx]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
FA [auth AB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
FA [auth AB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
FA [auth AB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
FA [auth AB]IPR001865Small ribosomal subunit protein uS2Family
GA [auth AC]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
HA [auth AE]IPR000851Small ribosomal subunit protein uS5Family
HA [auth AE]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
HA [auth AE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
HA [auth AE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
HA [auth AE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
HA [auth AE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
HA [auth AE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
JA [auth AG]IPR000235Small ribosomal subunit protein uS7Family
JA [auth AG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
JA [auth AG]IPR023798Small ribosomal subunit protein uS7 domainDomain
KA [auth AJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
KA [auth AJ]IPR040055Small ribosomal subunit protein uS10mFamily
KA [auth AJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
LA [auth AK]IPR001971Small ribosomal subunit protein uS11Family
LA [auth AK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
LA [auth AK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
MA [auth AL]IPR006032Small ribosomal subunit protein uS12Family
MA [auth AL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth AL]IPR005679Ribosomal protein uS12, bacterial-typeFamily
D [auth BV]IPR028909Large ribosomal subunit protein bL21-likeFamily
D [auth BV]IPR001787Large ribosomal subunit protein bL21Family
D [auth BV]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
NA [auth AN]IPR001209Small ribosomal subunit protein uS14Family
OA [auth AO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
OA [auth AO]IPR052137Universal small ribosomal subunit uS15Family
OA [auth AO]IPR000589Small ribosomal subunit protein uS15Family
PA [auth AP]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
PA [auth AP]IPR000307Small ribosomal subunit protein bS16Family
RA [auth AR]IPR001648Small ribosomal subunit protein bS18Family
RA [auth AR]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
RA [auth AR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
SA [auth AU]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
SA [auth AU]IPR001911Small ribosomal subunit protein bS21Family
XA [auth Aa]IPR019374Small ribosomal subunit protein mS22Family
E [auth BW]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
E [auth BW]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
E [auth BW]IPR001063Large ribosomal subunit protein uL22Family
YA [auth Ab]IPR023611Small ribosomal subunit protein mS23, conserved domainDomain
YA [auth Ab]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
ZA [auth Ac]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
ZA [auth Ac]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
ZA [auth Ac]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
AB [auth Ad]IPR002012Gonadotropin-releasing hormoneConserved Site
AB [auth Ad]IPR019792GonadoliberinFamily
CB [auth B1]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
CB [auth B1]IPR026569Large ribosomal subunit protein bL28Family
CB [auth B1]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
DB [auth Af]IPR019375Small ribosomal subunit protein bS1mFamily
EB [auth Ag]IPR008092Small ribosomal subunit protein mS29, metazoan-typeFamily
EB [auth Ag]IPR019368Small ribosomal subunit protein mS29Family
EB [auth Ag]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IB [auth Ak]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
IB [auth Ak]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
JB [auth Am]IPR010625CHCHDomain
JB [auth Am]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
JB [auth Am]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
KB [auth An]IPR013177Ribosomal protein mS38, C-terminalDomain
LB [auth Ao]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
LB [auth Ao]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
LB [auth Ao]IPR002885Pentatricopeptide repeatRepeat
MB [auth Ap]IPR040054Small ribosomal subunit protein mS40Family
MB [auth Ap]IPR001648Small ribosomal subunit protein bS18Family
MB [auth Ap]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
IPR000206Large ribosomal subunit protein bL12Family
UB [auth B2]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
UB [auth B2]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
VB [auth B3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
VB [auth B3]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
VB [auth B3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
XB [auth B5]IPR002677Large ribosomal subunit protein bL32Family
XB [auth B5]IPR051991Mitochondrial ribosomal protein bL32Family
XB [auth B5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
G [auth BY]IPR003256Large ribosomal subunit protein uL24Family
G [auth BY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
G [auth BY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
G [auth BY]IPR005824KOWDomain
G [auth BY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
G [auth BY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
YB [auth B6]IPR052008Mitochondrial ribosomal protein bL33Family
YB [auth B6]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
YB [auth B6]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
YB [auth B6]IPR001705Large ribosomal subunit protein bL33Family
ZB [auth B7]IPR000271Large ribosomal subunit protein bL34Family
AC [auth B8]IPR019338Large ribosomal subunit protein bL35mFamily
BC [auth B9]IPR000473Large ribosomal subunit protein bL36Family
BC [auth B9]IPR052143Mitochondrial Large Ribosomal Subunit bL36mFamily
BC [auth B9]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
EC [auth BC]IPR005225Small GTP-binding domainDomain
EC [auth BC]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
EC [auth BC]IPR004540Translation elongation factor EFG/EF2Family
EC [auth BC]IPR000795Translational (tr)-type GTP-binding domainDomain
EC [auth BC]IPR000640Elongation factor EFG, domain V-likeDomain
EC [auth BC]IPR031157Tr-type G domain, conserved siteConserved Site
EC [auth BC]IPR009022Elongation factor G, domain IIIDomain
EC [auth BC]IPR035647EF-G domain III/V-likeHomologous Superfamily
EC [auth BC]IPR041095Elongation Factor G, domain IIDomain
EC [auth BC]IPR004161Translation elongation factor EFTu-like, domain 2Domain
EC [auth BC]IPR047872Elongation factor G, domain IVDomain
EC [auth BC]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EC [auth BC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
EC [auth BC]IPR035649EFG, domain VDomain
EC [auth BC]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
EC [auth BC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
FC [auth BD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
FC [auth BD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FC [auth BD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
FC [auth BD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FC [auth BD]IPR002171Large ribosomal subunit protein uL2Family
HC [auth BF]IPR013005Large ribosomal subunit protein uL4-likeFamily
HC [auth BF]IPR002136Large ribosomal subunit protein uL4Family
HC [auth BF]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
H [auth Ba]IPR052482Mitochondrial large ribosomal subunit mL37Family
H [auth Ba]IPR010793Large ribosomal subunit protein mL37/mL65Family
JC [auth BJ]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
JC [auth BJ]IPR001790Large ribosomal subunit protein uL10Family
JC [auth BJ]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
KC [auth BK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
KC [auth BK]IPR000911Ribosomal protein uL11Family
KC [auth BK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
KC [auth BK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
LC [auth BN]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
LC [auth BN]IPR005822Large ribosomal subunit protein uL13Family
LC [auth BN]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
LC [auth BN]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
MC [auth BO]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
MC [auth BO]IPR000218Large ribosomal subunit protein uL14Family
OC [auth BQ]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
OC [auth BQ]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
OC [auth BQ]IPR016180Large ribosomal subunit protein uL16 domainDomain
OC [auth BQ]IPR047873Large ribosomal subunit protein uL16Family
PC [auth BR]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
PC [auth BR]IPR000456Large ribosomal subunit protein bL17Family
QC [auth BS]IPR005484Large ribosomal subunit protein uL18Family
QC [auth BS]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
I [auth Bb]IPR036610PEBP-like superfamilyHomologous Superfamily
I [auth Bb]IPR008914Phosphatidylethanolamine-binding proteinFamily
I [auth Bb]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily