6Y6M | pdb_00006y6m

solution structure of cold-shock domain 1 and 2 of drosophila Upstream of N-Ras (Unr)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACSDe6y6mA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: CSDECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF23456Cold shock domain-containing protein E1 CSD domain (CSDE1)Cold shock domain-containing protein E1 CSD domainThis entry represents several divergent cold-shock domains found in the CSDE1 protein. The CSDE1 family comprises RNA-binding proteins that play a crucial role in translationally coupled mRNA turnover. Members are involved in the cytoplasmic deadeny ...This entry represents several divergent cold-shock domains found in the CSDE1 protein. The CSDE1 family comprises RNA-binding proteins that play a crucial role in translationally coupled mRNA turnover. Members are involved in the cytoplasmic deadenylation, translation, and decay processes, particularly interacting with the mCRD domain of FOS mRNA. They are essential for the efficient formation of stress granules, cellular structures that form in response to environmental stress, aiding in the storage and management of untranslated mRNAs. Additionally, the human variant is implicated in the internal initiation of translation of human rhinovirus RNA, suggesting a role in microbial infection responses.
Domain
PF00313'Cold-shock' DNA-binding domain (CSD)'Cold-shock' DNA-binding domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Upstream of N-ras, isoform A