6XZD
Influenza C virus polymerase complex without chicken ANP32A - Subclass 2
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth AP1] | PF00603 | e6xzdAP12 | A: a+b complex topology | X: Polymerase acidic protein (From Topology) | H: Polymerase acidic protein (From Topology) | T: Polymerase acidic protein | F: PF00603 | ECOD (1.6) |
B [auth AP1] | PF00603 | e6xzdAP11 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: PF00603 | ECOD (1.6) |
C [auth BP1] | PF00602 | e6xzdBP11 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: PF00602 | ECOD (1.6) |
C [auth BP1] | PF00602 | e6xzdBP12 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00602 | ECOD (1.6) |
C [auth BP1] | PF00602 | e6xzdBP13 | A: extended segments | X: RNA polymerase PB1 C-terminal fragment (From Topology) | H: RNA polymerase PB1 C-terminal fragment (From Topology) | T: RNA polymerase PB1 C-terminal fragment | F: PF00602 | ECOD (1.6) |
F [auth EP1] | PF00602 | e6xzdEP12 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: PF00602 | ECOD (1.6) |
F [auth EP1] | PF00602 | e6xzdEP11 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00602 | ECOD (1.6) |
D [auth CP1] | PF00604,PF20951 | e6xzdCP17 | A: alpha arrays | X: PB2 '627' domain-related (From Homology) | H: PB2 '627' domain-related | T: Polymerase basic protein 2 (PB2) '627' domain | F: PF00604,PF20951 | ECOD (1.6) |
D [auth CP1] | PF20950 | e6xzdCP12 | A: alpha arrays | X: Helical domain in PB2 (From Topology) | H: Helical domain in PB2 (From Topology) | T: Helical domain in PB2 | F: PF20950 | ECOD (1.6) |
D [auth CP1] | PF20952 | e6xzdCP16 | A: a+b two layers | X: PB2 C-terminal domain-like (From Topology) | H: PB2 C-terminal domain-like (From Topology) | T: PB2 C-terminal domain-like | F: PF20952 | ECOD (1.6) |
D [auth CP1] | PF20948 | e6xzdCP11 | A: a+b two layers | X: a+b domain in PB2 (From Topology) | H: a+b domain in PB2 (From Topology) | T: a+b domain in PB2 | F: PF20948 | ECOD (1.6) |
D [auth CP1] | PF00604 | e6xzdCP14 | A: a+b three layers | X: Polymerase basic protein 2 cap-binding domain (From Topology) | H: Polymerase basic protein 2 cap-binding domain (From Topology) | T: Polymerase basic protein 2 cap-binding domain | F: PF00604 | ECOD (1.6) |
D [auth CP1] | PF20949 | e6xzdCP15 | A: a+b complex topology | X: Middle domain in PB2 (From Topology) | H: Middle domain in PB2 (From Topology) | T: Middle domain in PB2 | F: PF20949 | ECOD (1.6) |
D [auth CP1] | PF20947 | e6xzdCP13 | A: extended segments | X: RNA polymerase PB2 N-terminal fragment (From Topology) | H: RNA polymerase PB2 N-terminal fragment (From Topology) | T: RNA polymerase PB2 N-terminal fragment | F: PF20947 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth AP1], E [auth DP1] | PF00603 | Influenza RNA-dependent RNA polymerase subunit PA (Flu_PA) | Influenza RNA-dependent RNA polymerase subunit PA | - | Family |
C [auth BP1], F [auth EP1] | PF00602 | Influenza RNA-dependent RNA polymerase subunit PB1 (Flu_PB1) | Influenza RNA-dependent RNA polymerase subunit PB1 | - | Family |
D [auth CP1], G [auth FP1] | PF20948 | Influenza RNA polymerase PB2 second domain (Flu_PB2_2nd) | Influenza RNA polymerase PB2 second domain | Influenza virus encodes a large, multidomain RNA-dependent RNA polymerase that can both transcribe and replicate the viral RNA genome. In influenza virus, the polymerase is composed of three polypeptides: PB1, PB2 and PA/P3. PB1 houses the polymerase ... | Domain |
D [auth CP1], G [auth FP1] | PF00604 | Influenza RNA polymerase PB2 CAP binding domain (Flu_PB2_5th) | Influenza RNA polymerase PB2 CAP binding domain | Influenza virus encodes a large, multidomain RNA-dependent RNA polymerase that can both transcribe and replicate the viral RNA genome. In influenza virus, the polymerase is composed of three polypeptides: PB1, PB2 and PA/P3. PB1 houses the polymerase ... | Domain |
D [auth CP1], G [auth FP1] | PF20947 | Influenza RNA polymerase PB2 N-terminal region (Flu_PB2_1st) | Influenza RNA polymerase PB2 N-terminal region | - | Family |
D [auth CP1], G [auth FP1] | PF20949 | Influenza RNA polymerase PB2 middle domain (Flu_PB2_3rd) | Influenza RNA polymerase PB2 middle domain | Influenza virus encodes a large, multidomain RNA-dependent RNA polymerase that can both transcribe and replicate the viral RNA genome. In influenza virus, the polymerase is composed of three polypeptides: PB1, PB2 and PA/P3. PB1 houses the polymerase ... | Domain |
D [auth CP1], G [auth FP1] | PF20951 | Influenza RNA polymerase PB2 6th domain (Flu_PB2_6th) | Influenza RNA polymerase PB2 6th domain | Influenza virus encodes a large, multidomain RNA-dependent RNA polymerase that can both transcribe and replicate the viral RNA genome. In influenza virus, the polymerase is composed of three polypeptides: PB1, PB2 and PA/P3. PB1 houses the polymerase ... | Domain |
D [auth CP1], G [auth FP1] | PF20950 | Influenza RNA polymerase PB2 helical domain (Flu_PB2_4th) | Influenza RNA polymerase PB2 helical domain | Influenza virus encodes a large, multidomain RNA-dependent RNA polymerase that can both transcribe and replicate the viral RNA genome. In influenza virus, the polymerase is composed of three polypeptides: PB1, PB2 and PA/P3. PB1 houses the polymerase ... | Domain |
D [auth CP1], G [auth FP1] | PF20952 | Influenza RNA polymerase PB2 C-terminal domain (Flu_PB2_7th) | Influenza RNA polymerase PB2 C-terminal domain | Influenza virus encodes a large, multidomain RNA-dependent RNA polymerase that can both transcribe and replicate the viral RNA genome. In influenza virus, the polymerase is composed of three polypeptides: PB1, PB2 and PA/P3. PB1 houses the polymerase ... | Domain |