6XZ6 | pdb_00006xz6

Structure of the trypanosome brucei factor H receptor bound to domain D5 of bovine factor H


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DSushie6xz6D1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: Complement control module/SCR domainF: SushiECOD (1.6)
BSushie6xz6B1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: Complement control module/SCR domainF: SushiECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, D
PF00084Sushi repeat (SCR repeat) (Sushi)Sushi repeat (SCR repeat)Domain
A, C
PF16731Glutamic acid/alanine-rich protein of Trypanosoma (GARP)Glutamic acid/alanine-rich protein of TrypanosomaGARP, or glutamic acid/alanine-rich protein, is one of a subset of major surface molecules on Trypanosoma species. They are all surface-orientated, immunodominant, and highly charged. GARP is interesting as ts expression coincides with the loss and ...GARP, or glutamic acid/alanine-rich protein, is one of a subset of major surface molecules on Trypanosoma species. They are all surface-orientated, immunodominant, and highly charged. GARP is interesting as ts expression coincides with the loss and gain of variant surface glycoprotein (VSG) molecules in the tsetse vector. It has an extended helical bundle structure that is homologous to the core surface structure of VSG, suggesting that it might replace the bloodstream VSG as the trypanosomes differentiate inside the tsetse vector after a blood-meal [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, D
Complement factor H
A, C
GARP domain-containing protein-