6XN7 | pdb_00006xn7

Structure of the Lactococcus lactis Csm NTR CRISPR-Cas Complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth F]SCOP2B SuperfamilyCRISPR-associated proteins 8106216 3001554 SCOP2B (2022-06-29)
D [auth H]SCOP2B SuperfamilyCRISPR-associated proteins 8106216 3001554 SCOP2B (2022-06-29)
F [auth I]SCOP2B SuperfamilyCRISPR-associated proteins 8106216 3001554 SCOP2B (2022-06-29)
E [auth G]SCOP2B SuperfamilyCRISPR-associated proteins 8106216 3001554 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASybindine6xn7A2 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: SybindinECOD (v294.1)
BIon_transe6xn7B1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Ion_transECOD (v294.1)
G [auth J]TIL_OTOGL_Mucine6xn7J1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: TIL_OTOGL_MucinECOD (v294.1)
I [auth C]Sybindine6xn7C1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: SybindinECOD (v294.1)
J [auth D]Sybindine6xn7D1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: SybindinECOD (v294.1)
K [auth E]Sybindine6xn7E1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: SybindinECOD (v294.1)
C [auth F]Sybindine6xn7F1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: SybindinECOD (v294.1)
D [auth H]Sybindine6xn7H1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: SybindinECOD (v294.1)
F [auth I]Sybindine6xn7I1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: SybindinECOD (v294.1)
E [auth G]Sybindine6xn7G1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: SybindinECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.70.270 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Reverse transcriptase/Diguanylate cyclase domainCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
CRISPR-associated protein Cas10 -
CRISPR-associated protein Csm4 -
G [auth J]CRISPR-associated protein Csm5 -
I [auth C],
J [auth D],
K [auth E]
CRISPR-associated protein Csm2 -
L [auth T]Target RNA---
H [auth R]Crispr RNA---
C [auth F],
D [auth H],
E [auth G],
F [auth I]
CRISPR-associated protein Csm3 -