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6XMV
|
pdb_00006xmv
The crystal structure of Neisseria gonorrhoeae DolP (NGO1985)
External Resource: Annotation
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
Cation_ATPase
e6xmvA1
A: a/b three-layered sandwiches
X: RNase A-like
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: Cation_ATPase
ECOD (v294.1)
Domain Annotation: CATH
CATH Database Homepage
Chain
Domain
Class
Architecture
Topology
Homology
Provenance Source (Version)
A
1.10.530.40
Mainly Alpha
Orthogonal Bundle
Lysozyme
CATH (utative)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF04972
BON domain (BON)
BON domain
This domain is found in a family of osmotic shock protection proteins (e.g. Swiss:P27291). It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes [1].
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
Hemolysin,Endolysin
hydrolase activity, acting on glycosyl bonds
peptidoglycan muralytic activity
hydrolase activity, hydrolyzing O-glycosyl compounds
lysozyme activity
hydrolase activity
catalytic activity
defense response to bacterium
biological process involved in interspecies interaction between organisms
response to stimulus
response to other organism
defense response
response to bacterium
response to stress
response to external stimulus
response to external biotic stimulus
response to biotic stimulus
carbohydrate derivative catabolic process
catabolic process
peptidoglycan catabolic process
glycosaminoglycan metabolic process
defense response to bacterium
biological process involved in interspecies interaction between organisms
response to stimulus
response to other organism
defense response
response to bacterium
response to stress
response to external stimulus
response to external biotic stimulus
response to biotic stimulus
carbohydrate derivative catabolic process
catabolic process
peptidoglycan catabolic process
glycosaminoglycan metabolic process
carbohydrate derivative metabolic process
aminoglycan catabolic process
macromolecule catabolic process
glycosaminoglycan catabolic process
aminoglycan metabolic process
peptidoglycan metabolic process
metabolic process
cellular process
macromolecule metabolic process
symbiont-mediated cytolysis of host cell
viral life cycle
disruption of cell in another organism
cytolysis
biological process involved in interaction with host
biological process involved in symbiotic interaction
viral release from host cell by cytolysis
exit from host cell
viral process
cytolysis in another organism
viral release from host cell
disruption of anatomical structure in another organism
symbiont-mediated killing of host cell
killing of cells of another organism
cell killing
cell wall organization or biogenesis
cell wall macromolecule catabolic process
cell wall macromolecule metabolic process
Less
host cellular component
host intracellular part
cellular anatomical structure
host cell cytoplasm
host cell part
host intracellular region
other organism part
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR052619
Bacteriophage lysozyme-like
Family
A
IPR001165
T4-type lysozyme
Family
A
IPR034690
Endolysin T4 type
Family
A
IPR002196
Glycoside hydrolase, family 24
Family
A
IPR023347
Lysozyme domain superfamily
Homologous Superfamily
A
IPR023346
Lysozyme-like domain superfamily
Homologous Superfamily
A
IPR007055
BON domain
Domain
A
IPR051686
Outer membrane lipoprotein DolP
Family
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