6XIQ | pdb_00006xiq

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ISCOP2 FamilyRibosomal protein L10e 8101312 4001135 SCOP2 (2022-06-29)
ISCOP2 SuperfamilyRibosomal protein L16p/L10e 8101313 3000884 SCOP2 (2022-06-29)
P [auth Q]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095970 3001045 SCOP2B (2022-06-29)
U [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like 8103364 3000433 SCOP2B (2022-06-29)
IA [auth c]SCOP2B SuperfamilyL30e-like 8039862 3001739 SCOP2B (2022-06-29)
CC [auth L1]SCOP2 FamilyRibosomal protein L1p/L10e-like 8096939 4002929 SCOP2 (2022-06-29)
CC [auth L1]SCOP2 SuperfamilyRibosomal protein L1p/L10e-like 8096940 3001911 SCOP2 (2022-06-29)
YB [auth AU]SCOP2B SuperfamilyRibosomal protein S30e-like 8053451 3002190 SCOP2B (2022-06-29)
UB [auth AQ]SCOP2 FamilyRibosomal protein S26e 8096935 4006236 SCOP2 (2022-06-29)
UB [auth AQ]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8096936 3000068 SCOP2 (2022-06-29)
QB [auth AM]SCOP2 FamilyRibosomal protein S8 8101310 4002027 SCOP2 (2022-06-29)
QB [auth AM]SCOP2 SuperfamilyRibosomal protein S8 8101311 3000709 SCOP2 (2022-06-29)
PB [auth AL]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053136 3000068 SCOP2B (2022-06-29)
MB [auth AI]SCOP2B SuperfamilyS13-like H2TH domain 8098450 3000053 SCOP2B (2022-06-29)
KB [auth AG]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8103366 3000100 SCOP2B (2022-06-29)
IB [auth AE]SCOP2B SuperfamilyTranslational machinery components 8098660 3000571 SCOP2B (2022-06-29)
HB [auth AD]SCOP2B SuperfamilyHomeodomain-like 8052973 3000001 SCOP2B (2022-06-29)
HB [auth AD]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052974 3001284 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRibosomal protein L30p/L7e 8052917 3001378 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRibosomal L30p/L7e protein, N-terminal domain-lke 8052916 3002152 SCOP2B (2022-06-29)
DB [auth w]SCOP2B SuperfamilyGS N-terminal domain-like 8053173 3000408 SCOP2B (2022-06-29)
CB [auth v]SCOP2B SuperfamilyRibosomal protein S7 8065999 3000799 SCOP2B (2022-06-29)
BB [auth u]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052760 3000334 SCOP2B (2022-06-29)
BB [auth u]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052758 3001473 SCOP2B (2022-06-29)
BB [auth u]SCOP2B SuperfamilyNucleic acid-binding proteins 8052759 3000135 SCOP2B (2022-06-29)
YA [auth r]SCOP2 FamilyRibosomal S3Ae 8101308 4006095 SCOP2 (2022-06-29)
YA [auth r]SCOP2 SuperfamilyRibosomal S3Ae-like 8101309 3002166 SCOP2 (2022-06-29)
XA [auth q]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8061280 3001397 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053109 3000334 SCOP2B (2022-06-29)
VA [auth p]SCOP2B SuperfamilyZn-binding ribosomal proteins 8103126 3001320 SCOP2B (2022-06-29)
RA [auth l]SCOP2B SuperfamilyRibosomal protein L39e 8078549 3001756 SCOP2B (2022-06-29)
QA [auth k]SCOP2 FamilyRibosomal L38e protein-like 8096923 4006532 SCOP2 (2022-06-29)
QA [auth k]SCOP2 SuperfamilyRibosomal L38e protein-like 8096924 3002206 SCOP2 (2022-06-29)
PA [auth j]SCOP2B SuperfamilyZn-binding ribosomal proteins 8080044 3001320 SCOP2B (2022-06-29)
OA [auth i]SCOP2B SuperfamilyRibosomal protein L36e 8053115 3002161 SCOP2B (2022-06-29)
MA [auth g]SCOP2B SuperfamilyRibosomal protein L34e-like 8053547 3002203 SCOP2B (2022-06-29)
LA [auth f]SCOP2B SuperfamilyTranslational proteins 8087451 3000811 SCOP2B (2022-06-29)
HA [auth b]SCOP2 FamilyRibosomal protein L29e 8096929 4006531 SCOP2 (2022-06-29)
HA [auth b]SCOP2 SuperfamilyRibosomal protein L29e 8096930 3002157 SCOP2 (2022-06-29)
GA [auth a]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8077127 3001045 SCOP2B (2022-06-29)
AA [auth AB]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052736 3002138 SCOP2B (2022-06-29)
AA [auth AB]SCOP2B SuperfamilyNucleic acid-binding proteins 8052738 3000135 SCOP2B (2022-06-29)
Z [auth AA]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055713 3000034 SCOP2B (2022-06-29)
Y [auth Z]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053046 3000334 SCOP2B (2022-06-29)
X [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076760 3000334 SCOP2B (2022-06-29)
W [auth X]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095962 3000210 SCOP2B (2022-06-29)
T [auth U]SCOP2B Superfamily60S Ribosomal protein L22e 8053058 3002158 SCOP2B (2022-06-29)
BSCOP2 FamilyRibosomal protein L3 8096941 4002103 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyTranslational proteins 8096942 3000811 SCOP2 (2022-06-29)
Q [auth R]SCOP2B SuperfamilyRibosomal protein L19 (L19e) 8077485 3000890 SCOP2B (2022-06-29)
O [auth P]SCOP2B SuperfamilyRibosomal protein L22 8076708 3001078 SCOP2B (2022-06-29)
N [auth O]SCOP2B SuperfamilyRibosomal protein L13 8066053 3001134 SCOP2B (2022-06-29)
M [auth N]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082481 3000210 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyRibosomal protein L13e-like 8053159 3002162 SCOP2B (2022-06-29)
JSCOP2 FamilyRibosomal protein L5 8096931 4001498 SCOP2 (2022-06-29)
JSCOP2 SuperfamilyRL5-like 8096932 3001709 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IRibosomal_L16e6xiqI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
P [auth Q]Ribosomal_L18e6xiqQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
U [auth V]Ribosomal_L14e6xiqV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
IA [auth c]Ribosomal_L7Aee6xiqc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
UA [auth o]Ribosomal_L44e6xiqo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
JB [auth AF]Ribosomal_S19e6xiqAF1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
RB [auth AN]Ribosom_S12_S23e6xiqAN1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
CC [auth L1]Ribosomal_L1_2nd_1e6xiqL12 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
CC [auth L1]Ribosomal_L1_1st_1e6xiqL11 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)
HRibosomal_L6_2e6xiqH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
HRibosomal_L6e6xiqH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
ZB [auth AV]ANAPC4_WD40_2e6xiqAV1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_2ECOD (1.6)
YB [auth AU]Ribosomal_S30e6xiqAU1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
XB [auth AT]Ribosomal_S14_2e6xiqAT1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
WB [auth AS]Ribosomal_S28ee6xiqAS1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
VB [auth AR]Ribosomal_S27ee6xiqAR1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
UB [auth AQ]Ribosomal_S26ee6xiqAQ1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
TB [auth AP]Ribosomal_S25e6xiqAP1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
SB [auth AO]Ribosomal_S24ee6xiqAO1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
GRibosomal_L7Ae_1e6xiqG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
QB [auth AM]Ribosomal_S8_N_1e6xiqAM1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
QB [auth AM]Ribosomal_S8_C_1e6xiqAM2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
PB [auth AL]Ribosomal_S21ee6xiqAL1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
OB [auth AK]Ribosomal_S10_1e6xiqAK1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
NB [auth AJ]Ribosomal_S19ee6xiqAJ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
MB [auth AI]Ribosomal_S13e6xiqAI1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
LB [auth AH]Ribosomal_S17ee6xiqAH1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
KB [auth AG]Ribosomal_S9e6xiqAG1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
IB [auth AE]Ribosomal_S11e6xiqAE1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
HB [auth AD]Ribosomal_S13_Ne6xiqAD1 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
HB [auth AD]Ribosomal_S15_2e6xiqAD2 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
FRibosomal_L30_1e6xiqF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
GB [auth z]S4e6xiqz1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
FB [auth y]Ribosomal_S8ee6xiqy1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
EB [auth x]Ribosomal_S7e_Ne6xiqx1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
EB [auth x]Ribosomal_S7e_C_2e6xiqx2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_2ECOD (1.6)
DB [auth w]Ribosomal_S6ee6xiqw1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
CB [auth v]Ribosomal_S7_1e6xiqv1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
BB [auth u]Ribosomal_S4ee6xiqu1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
BB [auth u]40S_S4_Ce6xiqu2 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
BB [auth u]RS4NTe6xiqu3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
AB [auth t]Ribosomal_S3_Ce6xiqt2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
AB [auth t]KH_2_3e6xiqt1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
ZA [auth s]Ribosomal_S5_C_1e6xiqs2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
ZA [auth s]Ribosomal_S5_3e6xiqs1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
ZA [auth s]Ribosomal_S5_2e6xiqs3 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
YA [auth r]Ribosomal_S3Ae_Ne6xiqr1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
YA [auth r]Ribosomal_S3Ae_Ce6xiqr2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
XA [auth q]Ribosomal_S2_2e6xiqq1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
ERibosomal_L6ee6xiqE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
VA [auth p]Ribosomal_L37aee6xiqp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
TA [auth n]Ribosomal_L41e6xiqn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
SA [auth m]Ribosomal_L40ee6xiqm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
RA [auth l]Ribosomal_L39e6xiql1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
QA [auth k]Ribosomal_L38ee6xiqk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
PA [auth j]Ribosomal_L37ee6xiqj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
OA [auth i]Ribosomal_L36ee6xiqi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
NA [auth h]Ribosomal_L29_2e6xiqh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
DRibosomal_L5ee6xiqD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
MA [auth g]Ribosomal_L34ee6xiqg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
LA [auth f]Ribosomal_L35Aee6xiqf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
KA [auth e]Ribosomal_L32ee6xiqe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
JA [auth d]Ribosomal_L31ee6xiqd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
HA [auth b]Ribosomal_L29ee6xiqb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
GA [auth a]Ribosomal_L18e6xiqa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
FA [auth P2]Ribosomal_L11e6xiqP21 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
FA [auth P2]KOG0886e6xiqP22 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: KOG0886ECOD (1.6)
EA [auth P0]Ribosomal_L10e6xiqP02 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
EA [auth P0]Ribosomal_P0_L10ee6xiqP01 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: Ribosomal_P0_L10eECOD (1.6)
CRibosomal_L4e6xiqC2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
CRibos_L4_asso_Ce6xiqC1 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
AA [auth AB]Ribosomal_S17_1e6xiqAB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
Z [auth AA]S10_plectine6xiqAA1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
Y [auth Z]Ribosomal_L27ee6xiqZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
X [auth Y]Ribosomal_L26e6xiqY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
W [auth X]Ribosomal_L23_3e6xiqX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
V [auth W]Ribosomal_L24ee6xiqW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
T [auth U]Ribosomal_L22ee6xiqU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
BRibosomal_L3e6xiqB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
S [auth T]Ribosomal_L21ee6xiqT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
R [auth S]Ribosomal_L18Ae6xiqS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
Q [auth R]Ribosomal_L19e_Ne6xiqR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
Q [auth R]Ribosomal_L19e_Ce6xiqR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
O [auth P]Ribosomal_L22e6xiqP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
N [auth O]Ribosomal_L13e6xiqO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
M [auth N]Ribosomal_L15ee6xiqN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
L [auth M]Ribosomal_L14ee6xiqM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
K [auth L]Ribosomal_L13ee6xiqL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
JRibosomal_L5_Ce6xiqJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
ARibosomal_L2_1e6xiqA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
ARibosomal_L2_C_2e6xiqA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
P [auth Q]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
P [auth Q]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
U [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
U [auth V]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
RB [auth AN]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
ZB [auth AV]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
YB [auth AU]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
VB [auth AR]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
SB [auth AO]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
PB [auth AL]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
NB [auth AJ]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
MB [auth AI]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
KB [auth AG]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
IB [auth AE]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
HB [auth AD]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
AA [auth AB]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
AA [auth AB]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
Z [auth AA]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
Y [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
Y [auth Z]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
Y [auth Z]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
X [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
X [auth Y]PF00467KOW motif (KOW)KOW motif- Family
W [auth X]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
W [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
V [auth W]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
T [auth U]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
T [auth U]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
T [auth U]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
T [auth U]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
R [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
Q [auth R]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
O [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
O [auth P]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
N [auth O]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
N [auth O]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
M [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
L [auth M]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e familyBovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. Domain
L [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
L [auth M]PF00467KOW motif (KOW)KOW motif- Family
K [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
K [auth L]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
RPL10 isoform 1---
P [auth Q]60S ribosomal protein L18-A
U [auth V]60S ribosomal protein L23-A
IA [auth c]60S ribosomal protein L30
UA [auth o]60S ribosomal protein L42-A
JB [auth AF]RPS15 isoform 1---
RB [auth AN]40S ribosomal protein S23-A
BC [auth AY]mRNA---
CC [auth L1]RPL1A isoform 1---
RPL9A isoform 1---
AC [auth AX],
DC [auth AZ]
Transfer RNA---
ZB [auth AV]Guanine nucleotide-binding protein subunit beta-like protein
YB [auth AU]40S ribosomal protein S30-A
XB [auth AT]RPS29A isoform 1---
WB [auth AS]RPS28A isoform 1---
VB [auth AR]40S ribosomal protein S27-A
UB [auth AQ]RPS26B isoform 1---
TB [auth AP]RPS25A isoform 1---
SB [auth AO]40S ribosomal protein S24-A
RPL8A isoform 1---
QB [auth AM]RPS22A isoform 1---
PB [auth AL]40S ribosomal protein S21-A
OB [auth AK]RPS20 isoform 1---
NB [auth AJ]40S ribosomal protein S19-A
MB [auth AI]40S ribosomal protein S18-A
LB [auth AH]40S ribosomal protein S17-B
KB [auth AG]40S ribosomal protein S16-A
IB [auth AE]40S ribosomal protein S14-B
HB [auth AD]40S ribosomal protein S13
60S ribosomal protein L7-A
GB [auth z]40S ribosomal protein S9-A
FB [auth y]RPS8A isoform 1---
EB [auth x]40S ribosomal protein S7-A
DB [auth w]40S ribosomal protein S6-A
CB [auth v]Rps5p
BB [auth u]40S ribosomal protein S4-A
AB [auth t]RPS3 isoform 1---
ZA [auth s]RPS2 isoform 1---
YA [auth r]RPS1A isoform 1---
XA [auth q]40S ribosomal protein S0-A
60S ribosomal protein L6-A
WA [auth 2]18S ribosomal RNA---
VA [auth p]60S ribosomal protein L43-A
TA [auth n]RPL41A isoform 1---
SA [auth m]60S ribosomal protein L40
RA [auth l]60S ribosomal protein L39
QA [auth k]RPL38 isoform 1---
PA [auth j]60S ribosomal protein L37-A
OA [auth i]60S ribosomal protein L36-A
NA [auth h]60S ribosomal protein L35-A
RPL5 isoform 1---
MA [auth g]60S ribosomal protein L34-A
LA [auth f]60S ribosomal protein L33-A
KA [auth e]RPL32 isoform 1---
JA [auth d]60S ribosomal protein L31-A
HA [auth b]RPL29 isoform 1---
GA [auth a]60S ribosomal protein L28
FA [auth P2]RPL12A isoform 1---
EA [auth P0]RPP0 isoform 1---
DA [auth 4]5.8S ribosomal RNA---
RPL4A isoform 1---
CA [auth 3]5S ribosomal RNA---
BA [auth 1]35S ribosomal RNA---
AA [auth AB]40S ribosomal protein S11-A
Z [auth AA]40S ribosomal protein S10-A
Y [auth Z]60S ribosomal protein L27-A
X [auth Y]60S ribosomal protein L26-A
W [auth X]60S ribosomal protein L25
V [auth W]RPL24A isoform 1---
T [auth U]60S ribosomal protein L22-A
RPL3 isoform 1---
S [auth T]60S ribosomal protein L21-A
R [auth S]60S ribosomal protein L20-A
Q [auth R]60S ribosomal protein L19-A
O [auth P]60S ribosomal protein L17-A
N [auth O]60S ribosomal protein L16-A
M [auth N]60S ribosomal protein L15-A
L [auth M]60S ribosomal protein L14-A
K [auth L]60S ribosomal protein L13-A
RPL11B isoform 1---
60S ribosomal protein L2-A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
P [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
P [auth Q]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
P [auth Q]IPR000039Large ribosomal subunit protein eL18Family
P [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
U [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
U [auth V]IPR000218Large ribosomal subunit protein uL14Family
U [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IA [auth c]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
IA [auth c]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
IA [auth c]IPR039109Large ribosomal subunit protein eL30-likeFamily
IA [auth c]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
UA [auth o]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
UA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
UA [auth o]IPR000552Large ribosomal subunit protein eL42Family
RB [auth AN]IPR006032Small ribosomal subunit protein uS12Family
RB [auth AN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
RB [auth AN]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
ZB [auth AV]IPR019775WD40 repeat, conserved siteConserved Site
ZB [auth AV]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
ZB [auth AV]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
ZB [auth AV]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
ZB [auth AV]IPR045223Small ribosomal subunit protein RACK1-likeFamily
ZB [auth AV]IPR001680WD40 repeatRepeat
YB [auth AU]IPR006846Small ribosomal subunit protein eS30Family
VB [auth AR]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
VB [auth AR]IPR000592Small ribosomal subunit protein eS27Family
VB [auth AR]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SB [auth AO]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
SB [auth AO]IPR001976Small ribosomal subunit protein eS24Family
SB [auth AO]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
SB [auth AO]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
PB [auth AL]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
PB [auth AL]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
PB [auth AL]IPR001931Small ribosomal subunit protein eS21Family
NB [auth AJ]IPR001266Small ribosomal subunit protein eS19Family
NB [auth AJ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
NB [auth AJ]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
NB [auth AJ]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
MB [auth AI]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
MB [auth AI]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
MB [auth AI]IPR001892Small ribosomal subunit protein uS13Family
MB [auth AI]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
LB [auth AH]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
LB [auth AH]IPR001210Small ribosomal subunit protein eS17Family
LB [auth AH]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
KB [auth AG]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
KB [auth AG]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
KB [auth AG]IPR000754Small ribosomal subunit protein uS9Family
KB [auth AG]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IB [auth AE]IPR001971Small ribosomal subunit protein uS11Family
IB [auth AE]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
IB [auth AE]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
HB [auth AD]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
HB [auth AD]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
HB [auth AD]IPR000589Small ribosomal subunit protein uS15Family
HB [auth AD]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
IPR039699Large ribosomal subunit protein uL30Family
IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
GB [auth z]IPR002942RNA-binding S4 domainDomain
GB [auth z]IPR022801Small ribosomal subunit protein uS4Family
GB [auth z]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
GB [auth z]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
GB [auth z]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
GB [auth z]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
EB [auth x]IPR000554Small ribosomal subunit protein eS7Family
EB [auth x]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
DB [auth w]IPR014401Small ribosomal subunit protein eS6-likeFamily
DB [auth w]IPR001377Small ribosomal subunit protein eS6Family
DB [auth w]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
CB [auth v]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
CB [auth v]IPR000235Small ribosomal subunit protein uS7Family
CB [auth v]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
CB [auth v]IPR023798Small ribosomal subunit protein uS7 domainDomain
CB [auth v]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
BB [auth u]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
BB [auth u]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
BB [auth u]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
BB [auth u]IPR002942RNA-binding S4 domainDomain
BB [auth u]IPR013845Small ribosomal subunit protein eS4, central regionDomain
BB [auth u]IPR000876Small ribosomal subunit protein eS4Family
BB [auth u]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BB [auth u]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
BB [auth u]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
BB [auth u]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
BB [auth u]IPR005824KOWDomain
XA [auth q]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
XA [auth q]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
XA [auth q]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
XA [auth q]IPR001865Small ribosomal subunit protein uS2Family
XA [auth q]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR000915Large ribosomal subunit protein eL6Family
VA [auth p]IPR002674Large ribosomal subunit protein eL43Family
VA [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
VA [auth p]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
VA [auth p]IPR050522Eukaryotic ribosomal protein eL43Family
SA [auth m]IPR019954Ubiquitin conserved siteConserved Site
SA [auth m]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
SA [auth m]IPR000626Ubiquitin-like domainDomain
SA [auth m]IPR019956Ubiquitin domainDomain
SA [auth m]IPR050158Ubiquitin and ubiquitin-likeFamily
SA [auth m]IPR001975Large ribosomal subunit protein eL40 domainDomain
SA [auth m]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
RA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
RA [auth l]IPR000077Large ribosomal subunit protein eL39Family
RA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
PA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
PA [auth j]IPR001569Large ribosomal subunit protein eL37Family
PA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
PA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
OA [auth i]IPR000509Large ribosomal subunit protein eL36Family
OA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
NA [auth h]IPR001854Large ribosomal subunit protein uL29Family
NA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
NA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
NA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
MA [auth g]IPR008195Large ribosomal subunit protein eL34Family
MA [auth g]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
MA [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
LA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
LA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
LA [auth f]IPR001780Large ribosomal subunit protein eL33Family
LA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
JA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
JA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
JA [auth d]IPR000054Large ribosomal subunit protein eL31Family
GA [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
GA [auth a]IPR030878Large ribosomal subunit protein uL15Family
GA [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
GA [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
AA [auth AB]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
AA [auth AB]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
AA [auth AB]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AA [auth AB]IPR000266Small ribosomal subunit protein uS17Family
AA [auth AB]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
Z [auth AA]IPR037447Small ribosomal subunit protein eS10Family
Z [auth AA]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
Z [auth AA]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
Z [auth AA]IPR005326Plectin/eS10, N-terminalDomain
Y [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
Y [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
Y [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth Z]IPR001141Large ribosomal subunit protein eL27Family
Y [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
X [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
X [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
X [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
X [auth Y]IPR005824KOWDomain
X [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
W [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
W [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
W [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
W [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
W [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
T [auth U]IPR002671Large ribosomal subunit protein eL22Family
T [auth U]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
S [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
S [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
S [auth T]IPR001147Large ribosomal subunit protein eL21Family
S [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
R [auth S]IPR028877Large ribosomal subunit protein eL20Family
R [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
R [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
Q [auth R]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
Q [auth R]IPR039547Large ribosomal subunit protein eL19Family
Q [auth R]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
Q [auth R]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
Q [auth R]IPR000196Large ribosomal subunit protein eL19 domainDomain
Q [auth R]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
O [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
O [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
O [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
O [auth P]IPR001063Large ribosomal subunit protein uL22Family
N [auth O]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
N [auth O]IPR005822Large ribosomal subunit protein uL13Family
N [auth O]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
N [auth O]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
M [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
M [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
M [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
M [auth N]IPR000439Large ribosomal subunit protein eL15Family
L [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
L [auth M]IPR039660Large ribosomal subunit protein eL14Family
L [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
L [auth M]IPR005824KOWDomain
K [auth L]IPR001380Large ribosomal subunit protein eL13Family
K [auth L]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family