Annotations: 6XGQ

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
N [auth g]	UNK_F_TYPE	e6xgqg1	A: beta barrels	X: beta-clip	H: Head decoration protein D (gpD, major capsid protein D) (From Topology)	T: Head decoration protein D (gpD, major capsid protein D)	F: UNK_F_TYPE	ECOD (1.6)
M [auth f]	UNK_F_TYPE	e6xgqf1	A: beta barrels	X: beta-clip	H: Head decoration protein D (gpD, major capsid protein D) (From Topology)	T: Head decoration protein D (gpD, major capsid protein D)	F: UNK_F_TYPE	ECOD (1.6)
L [auth e]	UNK_F_TYPE	e6xgqe1	A: beta barrels	X: beta-clip	H: Head decoration protein D (gpD, major capsid protein D) (From Topology)	T: Head decoration protein D (gpD, major capsid protein D)	F: UNK_F_TYPE	ECOD (1.6)
K [auth d]	UNK_F_TYPE	e6xgqd1	A: beta barrels	X: beta-clip	H: Head decoration protein D (gpD, major capsid protein D) (From Topology)	T: Head decoration protein D (gpD, major capsid protein D)	F: UNK_F_TYPE	ECOD (1.6)
J [auth c]	UNK_F_TYPE	e6xgqc1	A: beta barrels	X: beta-clip	H: Head decoration protein D (gpD, major capsid protein D) (From Topology)	T: Head decoration protein D (gpD, major capsid protein D)	F: UNK_F_TYPE	ECOD (1.6)
I [auth b]	UNK_F_TYPE	e6xgqb1	A: beta barrels	X: beta-clip	H: Head decoration protein D (gpD, major capsid protein D) (From Topology)	T: Head decoration protein D (gpD, major capsid protein D)	F: UNK_F_TYPE	ECOD (1.6)
H [auth a]	UNK_F_TYPE	e6xgqa1	A: beta barrels	X: beta-clip	H: Head decoration protein D (gpD, major capsid protein D) (From Topology)	T: Head decoration protein D (gpD, major capsid protein D)	F: UNK_F_TYPE	ECOD (1.6)
C	Phage_cap_E	e6xgqC1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E	ECOD (1.6)
D	Phage_cap_E	e6xgqD1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E	ECOD (1.6)
F	Phage_cap_E	e6xgqF1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E	ECOD (1.6)
G	Phage_cap_E	e6xgqG1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E	ECOD (1.6)
E	Phage_cap_E	e6xgqE1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E	ECOD (1.6)
B	Phage_cap_E	e6xgqB1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E	ECOD (1.6)
A	Phage_cap_E	e6xgqA1	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_cap_E	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
M [auth f]	2.40.300.10	Mainly Beta	Beta Barrel	Virus Head Decoration Protein	Chain: A,	CATH (utative)
I [auth b]	2.40.300.10	Mainly Beta	Beta Barrel	Virus Head Decoration Protein	Chain: A,	CATH (utative)
C	3.30.1930.10	Alpha Beta	2-Layer Sandwich	capsid protein of prophage fold	capsid protein of prophage domain	CATH (utative)
D	3.30.1930.10	Alpha Beta	2-Layer Sandwich	capsid protein of prophage fold	capsid protein of prophage domain	CATH (utative)
F	3.30.1930.10	Alpha Beta	2-Layer Sandwich	capsid protein of prophage fold	capsid protein of prophage domain	CATH (utative)
E	3.30.1930.10	Alpha Beta	2-Layer Sandwich	capsid protein of prophage fold	capsid protein of prophage domain	CATH (utative)
B	3.30.1930.10	Alpha Beta	2-Layer Sandwich	capsid protein of prophage fold	capsid protein of prophage domain	CATH (utative)
A	3.30.1930.10	Alpha Beta	2-Layer Sandwich	capsid protein of prophage fold	capsid protein of prophage domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G	PF02924	Bacteriophage lambda head decoration protein D (HDPD)	Bacteriophage lambda head decoration protein D		Domain
A, B, C, D, E A, B, C, D, E, F, G	PF03864	Phage major capsid protein E (Phage_cap_E)	Phage major capsid protein E	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
H [auth a], I [auth b], J [auth c], K [auth d], L [auth e], H [auth a], I [auth b], J [auth c], K [auth d], L [auth e], M [auth f], N [auth g]	YSD1_16	-	-	-
A, B, C, D, E A, B, C, D, E, F, G	YSD1_17	-	-	viral capsid virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
H [auth a], I [auth b], J [auth c], K [auth d], L [auth e], H [auth a], I [auth b], J [auth c], K [auth d], L [auth e], M [auth f], N [auth g]	IPR004195	Head decoration protein D	Family
A, B, C, D, E A, B, C, D, E, F, G	IPR005564	Major capsid protein GpE	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.