Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-1F
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G [auth D] | Helicase_C | e6xbeD1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: Helicase_C | ECOD (v295.2) |
| E [auth C] | Helicase_C | e6xbeC1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: Helicase_C | ECOD (v295.2) |
| C [auth B] | Helicase_C | e6xbeB1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: Helicase_C | ECOD (v295.2) |
| A | e6xbeA1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| G [auth D] | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
| E [auth C] | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
| C [auth B] | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
| A | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| B [auth F], D [auth G], F [auth H], H [auth I] | macrocycle inhibitor NDM1i-1F | - | - | - |
| A, C [auth B], E [auth C], G [auth D] | BlaNDM-4_1_JQ348841 |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, C [auth B], E [auth C], G [auth D] | IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Homologous Superfamily |
| A, C [auth B], E [auth C], G [auth D] | IPR058199 | Metallo-beta-lactamase type 2/VIM/IMP-1 | Family |
| A, C [auth B], E [auth C], G [auth D] | IPR001279 | Metallo-beta-lactamase | Domain |
| A, C [auth B], E [auth C], G [auth D] | IPR050855 | Metallo-beta-lactamase type 2-like | Family |