Annotations: 6XBE

Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-1F

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
G [auth D]	SCOP2B Superfamily	Metallo-hydrolase/oxidoreductase	8097724	3001057	SCOP2B (2022-06-29)
E [auth C]	SCOP2B Superfamily	Metallo-hydrolase/oxidoreductase	8097724	3001057	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	Metallo-hydrolase/oxidoreductase	8097724	3001057	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Metallo-hydrolase/oxidoreductase	8097724	3001057	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G [auth D]	Helicase_C	e6xbeD1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Helicase_C	ECOD (v295.2)
E [auth C]	Helicase_C	e6xbeC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Helicase_C	ECOD (v295.2)
C [auth B]	Helicase_C	e6xbeB1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Helicase_C	ECOD (v295.2)
A		e6xbeA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F:	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
G [auth D]	3.60.15.10	Alpha Beta	4-Layer Sandwich	Metallo-beta-lactamase	Chain A	CATH (utative)
E [auth C]	3.60.15.10	Alpha Beta	4-Layer Sandwich	Metallo-beta-lactamase	Chain A	CATH (utative)
C [auth B]	3.60.15.10	Alpha Beta	4-Layer Sandwich	Metallo-beta-lactamase	Chain A	CATH (utative)
A	3.60.15.10	Alpha Beta	4-Layer Sandwich	Metallo-beta-lactamase	Chain A	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth F], D [auth G], F [auth H], H [auth I]	macrocycle inhibitor NDM1i-1F	-	-	-
A, C [auth B], E [auth C], G [auth D]	BlaNDM-4_1_JQ348841	beta-lactamase activity hydrolase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	antibiotic metabolic process catabolic process metabolic process cellular process antibiotic catabolic process	cellular anatomical structure extracellular region periplasmic space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C [auth B], E [auth C], G [auth D]	IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Homologous Superfamily
A, C [auth B], E [auth C], G [auth D]	IPR058199	Metallo-beta-lactamase type 2/VIM/IMP-1	Family
A, C [auth B], E [auth C], G [auth D]	IPR001279	Metallo-beta-lactamase	Domain
A, C [auth B], E [auth C], G [auth D]	IPR050855	Metallo-beta-lactamase type 2-like	Family

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