6X62 | pdb_00006x62

Legionella pneumophila Dot T4SS OMC

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
AA [auth GK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
C [auth DK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
DC [auth AK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
GD [auth CK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
IB [auth KK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
JA [auth HK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
K [auth EK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
QB [auth LK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
RA [auth IK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
S [auth FK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
YB [auth MK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
YC [auth BK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
ZA [auth JK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G [auth Dd]	CARD	e6x62Dd01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F: CARD	ECOD (v294.1)
EC [auth N]	GAF	e6x62N1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
FC [auth O]	GAF	e6x62O1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
GC [auth P]	GAF	e6x62P1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
IC [auth R]	GAF	e6x62R1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
JC [auth S]	GAF	e6x62S1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
KC [auth T]	GAF	e6x62T1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
LC [auth U]	GAF	e6x62U1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
MC [auth V]	GAF	e6x62V1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
NC [auth W]	GAF	e6x62W1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
OC [auth X]	GAF	e6x62X1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
PC [auth Y]	GAF	e6x62Y1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
QC [auth Z]	GAF	e6x62Z1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
HC [auth Q]	GAF	e6x62Q1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
AA [auth GK]	GAF	e6x62GK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
C [auth DK]	GAF	e6x62DK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
DC [auth AK]	GAF	e6x62AK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
GD [auth CK]	GAF	e6x62CK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
IB [auth KK]	GAF	e6x62KK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
JA [auth HK]	GAF	e6x62HK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
K [auth EK]	GAF	e6x62EK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
QB [auth LK]	GAF	e6x62LK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
RA [auth IK]	GAF	e6x62IK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
S [auth FK]	GAF	e6x62FK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
YB [auth MK]	GAF	e6x62MK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
YC [auth BK]	GAF	e6x62BK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)
ZA [auth JK]	GAF	e6x62JK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GAF	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
BA [auth AD], CC [auth Md], CD [auth Bd], EB [auth Jd], ED [auth CD], BA [auth AD], CC [auth Md], CD [auth Bd], EB [auth Jd], ED [auth CD], FA [auth Gd], G [auth Dd], GB [auth KD], HA [auth HD], I [auth ED], KD [auth Cd], MB [auth Kd], MD [auth DD], NA [auth Hd], O [auth Ed], OB [auth LD], PA [auth ID], Q [auth FD], UB [auth Ld], UC [auth Ad], VA [auth Id], W [auth Fd], WB [auth MD], WC [auth BD], XA [auth JD], Y [auth GD]	DotD	-	-	-
AB [auth JX], AC [auth MY], AD [auth BY], BB [auth JY], BC [auth MZ], AB [auth JX], AC [auth MY], AD [auth BY], BB [auth JY], BC [auth MZ], BD [auth BZ], CA [auth GX], D [auth DX], DA [auth GY], DB [auth JZ], E [auth DY], EA [auth GZ], EC [auth N], F [auth DZ], FC [auth O], GC [auth P], HC [auth Q], HD [auth CX], IC [auth R], ID [auth CY], JB [auth KX], JC [auth S], JD [auth CZ], KA [auth HX], KB [auth KY], KC [auth T], L [auth EX], LA [auth HY], LB [auth KZ], LC [auth U], M [auth EY], MA [auth HZ], MC [auth V], N [auth EZ], NC [auth W], OC [auth X], PC [auth Y], QC [auth Z], RB [auth LX], RC [auth AX], SA [auth IX], SB [auth LY], SC [auth AY], T [auth FX], TA [auth IY], TB [auth LZ], TC [auth AZ], U [auth FY], UA [auth IZ], V [auth FZ], ZB [auth MX], ZC [auth BX]	Type IV secretion system unknown protein fragment	-	-	-
AA [auth GK], C [auth DK], DC [auth AK], GD [auth CK], IB [auth KK], AA [auth GK], C [auth DK], DC [auth AK], GD [auth CK], IB [auth KK], JA [auth HK], K [auth EK], QB [auth LK], RA [auth IK], S [auth FK], YB [auth MK], YC [auth BK], ZA [auth JK]	Inner membrane lipoprotein YiaD	-	-	cellular anatomical structure membrane
B [auth DH], CB [auth AH], FD [auth CH], HB [auth KH], IA [auth HH], B [auth DH], CB [auth AH], FD [auth CH], HB [auth KH], IA [auth HH], J [auth EH], PB [auth LH], QA [auth IH], R [auth FH], XB [auth MH], XC [auth BH], YA [auth JH], Z [auth GH]	Type IV secretion protein IcmK	-	-	-
A [auth AC], DD [auth CC], FB [auth KC], GA [auth HC], H [auth EC], A [auth AC], DD [auth CC], FB [auth KC], GA [auth HC], H [auth EC], LD [auth DC], NB [auth LC], OA [auth IC], P [auth FC], VB [auth MC], VC [auth BC], WA [auth JC], X [auth GC]	DotC	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
BA [auth AD], CC [auth Md], CD [auth Bd], EB [auth Jd], ED [auth CD], BA [auth AD], CC [auth Md], CD [auth Bd], EB [auth Jd], ED [auth CD], FA [auth Gd], G [auth Dd], GB [auth KD], HA [auth HD], I [auth ED], KD [auth Cd], MB [auth Kd], MD [auth DD], NA [auth Hd], O [auth Ed], OB [auth LD], PA [auth ID], Q [auth FD], UB [auth Ld], UC [auth Ad], VA [auth Id], W [auth Fd], WB [auth MD], WC [auth BD], XA [auth JD], Y [auth GD]	IPR038140	DotD superfamily	Homologous Superfamily
BA [auth AD], CC [auth Md], CD [auth Bd], EB [auth Jd], ED [auth CD], BA [auth AD], CC [auth Md], CD [auth Bd], EB [auth Jd], ED [auth CD], FA [auth Gd], G [auth Dd], GB [auth KD], HA [auth HD], I [auth ED], KD [auth Cd], MB [auth Kd], MD [auth DD], NA [auth Hd], O [auth Ed], OB [auth LD], PA [auth ID], Q [auth FD], UB [auth Ld], UC [auth Ad], VA [auth Id], W [auth Fd], WB [auth MD], WC [auth BD], XA [auth JD], Y [auth GD]	IPR031817	DotD protein	Family
AA [auth GK], C [auth DK], DC [auth AK], GD [auth CK], IB [auth KK], AA [auth GK], C [auth DK], DC [auth AK], GD [auth CK], IB [auth KK], JA [auth HK], K [auth EK], QB [auth LK], RA [auth IK], S [auth FK], YB [auth MK], YC [auth BK], ZA [auth JK]	IPR006665	OmpA-like domain	Domain
AA [auth GK], C [auth DK], DC [auth AK], GD [auth CK], IB [auth KK], AA [auth GK], C [auth DK], DC [auth AK], GD [auth CK], IB [auth KK], JA [auth HK], K [auth EK], QB [auth LK], RA [auth IK], S [auth FK], YB [auth MK], YC [auth BK], ZA [auth JK]	IPR050330	Bacterial Outer Membrane Structural/Functional	Family
AA [auth GK], C [auth DK], DC [auth AK], GD [auth CK], IB [auth KK], AA [auth GK], C [auth DK], DC [auth AK], GD [auth CK], IB [auth KK], JA [auth HK], K [auth EK], QB [auth LK], RA [auth IK], S [auth FK], YB [auth MK], YC [auth BK], ZA [auth JK]	IPR036737	OmpA-like domain superfamily	Homologous Superfamily
A [auth AC], DD [auth CC], FB [auth KC], GA [auth HC], H [auth EC], A [auth AC], DD [auth CC], FB [auth KC], GA [auth HC], H [auth EC], LD [auth DC], NB [auth LC], OA [auth IC], P [auth FC], VB [auth MC], VC [auth BC], WA [auth JC], X [auth GC]	IPR031618	Putative type IV secretory system protein	Family

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth AC], AA [auth GK], BA [auth AD], C [auth DK], CC [auth Md] A [auth AC], AA [auth GK], BA [auth AD], C [auth DK], CC [auth Md], CD [auth Bd], DC [auth AK], DD [auth CC], EB [auth Jd], ED [auth CD], FA [auth Gd], FB [auth KC], G [auth Dd], GA [auth HC], GB [auth KD], GD [auth CK], H [auth EC], HA [auth HD], I [auth ED], IB [auth KK], JA [auth HK], K [auth EK], KD [auth Cd], LD [auth DC], MB [auth Kd], MD [auth DD], NA [auth Hd], NB [auth LC], O [auth Ed], OA [auth IC], OB [auth LD], P [auth FC], PA [auth ID], Q [auth FD], QB [auth LK], RA [auth IK], S [auth FK], UB [auth Ld], UC [auth Ad], VA [auth Id], VB [auth MC], VC [auth BC], W [auth Fd], WA [auth JC], WB [auth MD], WC [auth BD], X [auth GC], XA [auth JD], Y [auth GD], YB [auth MK], YC [auth BK], ZA [auth JK]	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Type IV Secretion Systems	Dot T4SS OMC type IV secretion system