6WVZ
Crystal structure of anti-MET Fab arm of amivantamab in complex with human MET
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth M] | SCOP2B Superfamily | Sema domain-like | 8039465 | 3000180 | SCOP2B (2022-06-29) |
C [auth M] | SCOP2B Superfamily | Plexin repeat-like | 8039466 | 3000415 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth H] | PF07654 | e6wvzH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
A [auth H] | PF07686 | e6wvzH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
B [auth L] | PF07654 | e6wvzL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
B [auth L] | PF07686 | e6wvzL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
C [auth M] | PF01403 | e6wvzM2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF01403 | ECOD (1.6) |
C [auth M] | PF01437 | e6wvzM1 | A: few secondary structure elements | X: Trefoil/Plexin domain-like (From Topology) | H: Trefoil/Plexin domain-like (From Topology) | T: Trefoil/Plexin domain-like | F: PF01437 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth H] | Heavy Chain | IGHV1 | - | hepatocyte growth factor receptor | SAbDab (2024-05-17) |
B [auth L] | Light Chain | IGKV1 | Kappa | hepatocyte growth factor receptor | SAbDab (2024-05-17) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth M] | PF01833 | IPT/TIG domain (TIG) | IPT/TIG domain | This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family d ... | Domain |
C [auth M] | PF01437 | Plexin repeat (PSI) | Plexin repeat | - | Family |
C [auth M] | PF01403 | Sema domain (Sema) | Sema domain | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth M] | IPR002909 | IPT domain | Domain |
C [auth M] | IPR008266 | Tyrosine-protein kinase, active site | Active Site |
C [auth M] | IPR020635 | Tyrosine-protein kinase, catalytic domain | Domain |
C [auth M] | IPR016244 | Tyrosine-protein kinase, HGF/MSP receptor | Family |
C [auth M] | IPR000719 | Protein kinase domain | Domain |
C [auth M] | IPR014756 | Immunoglobulin E-set | Homologous Superfamily |
C [auth M] | IPR031148 | Plexin family | Family |
C [auth M] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
C [auth M] | IPR036352 | Sema domain superfamily | Homologous Superfamily |
C [auth M] | IPR017441 | Protein kinase, ATP binding site | Binding Site |
C [auth M] | IPR016201 | PSI domain | Domain |
C [auth M] | IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain | Domain |
C [auth M] | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
C [auth M] | IPR002165 | Plexin repeat | Repeat |
C [auth M] | IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily |
C [auth M] | IPR001627 | Sema domain | Domain |