Annotations: 6WQM

Crystal structure of 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase from Bartonella henselae

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d6wqmf_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	automated matches	(Bartonella henselae str. Houston-1 ) [TaxId: 283166 ],	SCOPe (2.08)
E	d6wqme_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	automated matches	(Bartonella henselae str. Houston-1 ) [TaxId: 283166 ],	SCOPe (2.08)
D	d6wqmd_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	automated matches	(Bartonella henselae str. Houston-1 ) [TaxId: 283166 ],	SCOPe (2.08)
C	d6wqmc_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	automated matches	(Bartonella henselae str. Houston-1 ) [TaxId: 283166 ],	SCOPe (2.08)
B	d6wqmb_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	automated matches	(Bartonella henselae str. Houston-1 ) [TaxId: 283166 ],	SCOPe (2.08)
A	d6wqma_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	automated matches	(Bartonella henselae str. Houston-1 ) [TaxId: 283166 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	C1-set	e6wqmF1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: C1-set	ECOD (v295.2)
E	C1-set	e6wqmE1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: C1-set	ECOD (v295.2)
D	C1-set	e6wqmD1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: C1-set	ECOD (v295.2)
C	C1-set	e6wqmC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: C1-set	ECOD (v295.2)
B	C1-set	e6wqmB1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: C1-set	ECOD (v295.2)
A	C1-set	e6wqmA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: C1-set	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	N-succinyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity succinyltransferase activity catalytic activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR023180	Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1	Domain
A, B, C, D, E A, B, C, D, E, F	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR005664	Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family	Family
A, B, C, D, E A, B, C, D, E, F	IPR018357	Hexapeptide transferase, conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F	IPR037133	Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR001451	Hexapeptide repeat	Repeat

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6WQM | pdb_00006wqm

Crystal structure of 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase from Bartonella henselae

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage