6WP7 | pdb_00006wp7

Avenolide Binding Autoregulator AvaR1

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DTubulin_Ce6wp7D1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Tubulin_CECOD (v294.1)
CTubulin_Ce6wp7C1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Tubulin_CECOD (v294.1)
BTubulin_Ce6wp7B1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Tubulin_CECOD (v294.1)
ATubulin_Ce6wp7A1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Tubulin_CECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00440Bacterial regulatory proteins, tetR family (TetR_N)Bacterial regulatory proteins, tetR familyDomain
A, B, C, D
PF21935Tetracyclin repressor-like, C-terminal domain (TetR_C_45)Tetracyclin repressor-like, C-terminal domainThis domain is found at the C-terminal end of CprB from Streptomyces coelicolor (Swiss:O66122) and similar bacterial transcriptional regulators. This region is the ligand-binding domain (LBD) [1,2]. It is often found associated with Pfam:PF00440. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
AvaR1 - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR023772DNA-binding HTH domain, TetR-type, conserved siteConserved Site
A, B, C, D
IPR009057Homedomain-like superfamilyHomologous Superfamily
A, B, C, D
IPR047923A-factor receptor protein-likeFamily
A, B, C, D
IPR054126CprB tetracyclin repressor-like, C-terminal domainDomain
A, B, C, D
IPR001647DNA-binding HTH domain, TetR-typeDomain
A, B, C, D
IPR036271Tetracyclin repressor-like, C-terminal domain superfamilyHomologous Superfamily