6WOV

Cryo-EM structure of recombinant mouse Ryanodine Receptor type 2 wild type in complex with FKBP12.6


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EPF00254e6wovE1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
GPF00254e6wovG1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
FPF00254e6wovF1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
HPF00254e6wovH1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00622SPRY domain (SPRY)SPRY domain- Family
A, B, C, D
PF02815MIR domain (MIR)MIR domainThe MIR (protein mannosyltransferase, IP3R and RyR) domain is a domain that may have a ligand transferase function [1].Domain
A, B, C, D
PF08709Inositol 1,4,5-trisphosphate/ryanodine receptor (Ins145_P3_rec)Inositol 1,4,5-trisphosphate/ryanodine receptorThis domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-ga ...This domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-gated receptors and voltage-gated Ca2+ channels on the plasma membrane, thus allowing the endoplasmic reticulum discriminate between different types of neuronal activity [1].
Domain
A, B, C, D
PF21119Ryanodine receptor junctional solenoid repeat (RYDR_Jsol)Ryanodine receptor junctional solenoid repeatThis entry represents a region of the Ryanodine receptor composed of alpha helical ARM repeats [1]. This region has been termed the Junctional solenoid region (Jsol) [1].Domain
A, B, C, D
PF01365RIH domain (RYDR_ITPR)RIH domain- Repeat
A, B, C, D
PF00520Ion transport protein (Ion_trans)Ion transport protein- Family
A, B, C, D
PF02026RyR domain (RyR)RyR domain- Family
E, F, G, H
PF00254FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C)FKBP-type peptidyl-prolyl cis-trans isomerase- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Ryanodine receptor 2
E, F, G, H
Peptidyl-prolyl cis-trans isomerase FKBP1B