6WJN | pdb_00006wjn

SD-like state of human 26S Proteasome with non-cleavable M1-linked hexaubiquitin and E3 ubiquitin ligase E6AP/UBE3A

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth c]SCOP2B SuperfamilyJAB1/MPN domain-like 8053255 3001105 SCOP2B (2022-06-29)
I [auth c]SCOP2B SuperfamilyEIF3 subunit F C-terminal domain-like 8053254 3002167 SCOP2B (2022-06-29)
F [auth Z]SCOP2B SuperfamilyEIF3 subunit F C-terminal domain-like 8053251 3002167 SCOP2B (2022-06-29)
F [auth Z]SCOP2B SuperfamilyJAB1/MPN domain-like 8053252 3001105 SCOP2B (2022-06-29)
E [auth Y]SCOP2B SuperfamilyTPR-like 8057045 3001345 SCOP2B (2022-06-29)
E [auth Y]SCOP2B SuperfamilyWinged helix DNA-binding domain 8057047 3000034 SCOP2B (2022-06-29)
D [auth X]SCOP2B SuperfamilyWinged helix DNA-binding domain 8067905 3000034 SCOP2B (2022-06-29)
W [auth R]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079492 3000131 SCOP2B (2022-06-29)
KA [auth r]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079492 3000131 SCOP2B (2022-06-29)
T [auth O]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064074 3000131 SCOP2B (2022-06-29)
HA [auth o]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064074 3000131 SCOP2B (2022-06-29)
GA [auth n]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079175 3000131 SCOP2B (2022-06-29)
S [auth N]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079175 3000131 SCOP2B (2022-06-29)
R [auth M]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064054 3000131 SCOP2B (2022-06-29)
FA [auth m]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064054 3000131 SCOP2B (2022-06-29)
EA [auth l]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064060 3000131 SCOP2B (2022-06-29)
Q [auth L]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064060 3000131 SCOP2B (2022-06-29)
P [auth K]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064022 3000131 SCOP2B (2022-06-29)
DA [auth k]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064022 3000131 SCOP2B (2022-06-29)
CA [auth j]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064004 3000131 SCOP2B (2022-06-29)
O [auth J]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064004 3000131 SCOP2B (2022-06-29)
N [auth I]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064036 3000131 SCOP2B (2022-06-29)
BA [auth i]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064036 3000131 SCOP2B (2022-06-29)
AA [auth h]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064014 3000131 SCOP2B (2022-06-29)
M [auth H]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064014 3000131 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth c]JABe6wjnc1 A: a+b three layersX: Cytidine deaminase-like (From Topology)H: Cytidine deaminase-like (From Topology)T: Cytidine deaminase-likeF: JABECOD (1.6)
I [auth c]EUF08560e6wjnc2 A: extended segmentsX: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology)H: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology)T: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domainF: EUF08560ECOD (1.6)
H [auth b]VWAe6wjnb1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: VWAECOD (1.6)
G [auth a]PCI_1e6wjna3 A: alpha arraysX: HTHH: HTHT: wingedF: PCI_1ECOD (1.6)
G [auth a]KOG2908_Ne6wjna2 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: KOG2908_NECOD (1.6)
G [auth a]KOG2908_Ce6wjna1 A: extended segmentsX: 26S proteasome regulatory subunits C-terminal helicesH: 26S proteasome regulatory subunit RPN9 C-terminal helix (From Topology)T: 26S proteasome regulatory subunit RPN9 C-terminal helixF: KOG2908_CECOD (1.6)
F [auth Z]JABe6wjnZ1 A: a+b three layersX: Cytidine deaminase-like (From Topology)H: Cytidine deaminase-like (From Topology)T: Cytidine deaminase-likeF: JABECOD (1.6)
F [auth Z]MitMem_rege6wjnZ2 A: extended segmentsX: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology)H: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology)T: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domainF: MitMem_regECOD (1.6)
E [auth Y]PCI_1e6wjnY3 A: alpha arraysX: HTHH: HTHT: wingedF: PCI_1ECOD (1.6)
E [auth Y]RPN7e6wjnY2 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: RPN7ECOD (1.6)
E [auth Y]KOG0687e6wjnY1 A: extended segmentsX: 26S proteasome regulatory subunits C-terminal helicesH: 26S proteasome regulatory subunit RPN7 C-terminal helix (From Topology)T: 26S proteasome regulatory subunit RPN7 C-terminal helixF: KOG0687ECOD (1.6)
D [auth X]PCIe6wjnX1 A: alpha arraysX: HTHH: HTHT: wingedF: PCIECOD (1.6)
D [auth X]KOG1463e6wjnX2 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: KOG1463ECOD (1.6)
D [auth X]RPN6_likee6wjnX3 A: extended segmentsX: 26S proteasome regulatory subunits C-terminal helicesH: 26S proteasome regulatory subunit RPN6 C-termial helix (From Topology)T: 26S proteasome regulatory subunit RPN6 C-termial helixF: RPN6_likeECOD (1.6)
TA [auth f]KOG2005_1ste6wjnf1 A: alpha superhelicesX: Repetitive alpha hairpinsH: 26S proteasome subunit Rpn2 N-terminal domain (From Topology)T: 26S proteasome subunit Rpn2 N-terminal domainF: KOG2005_1stECOD (1.6)
TA [auth f]KOG1858_2nde6wjnf2 A: alpha superhelicesX: Repetitive alpha hairpinsH: Proteasome/cyclosome (PC) repeat (From Topology)T: Proteasome/cyclosome (PC) repeatF: KOG1858_2ndECOD (1.6)
SA [auth F]KOG0652_1ste6wjnF2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: KOG0652_1stECOD (1.6)
SA [auth F]KOG0652_3rd,KOG0652_2nde6wjnF3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG0652_3rd,KOG0652_2ndECOD (1.6)
SA [auth F]Sigma54_activate6wjnF1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sigma54_activatECOD (1.6)
RA [auth E]26Sp45e6wjnE1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: 26Sp45ECOD (1.6)
RA [auth E]KOG0652_2nde6wjnE3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG0652_2ndECOD (1.6)
RA [auth E]Sigma54_activate6wjnE2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sigma54_activatECOD (1.6)
C [auth W]PCIe6wjnW3 A: alpha arraysX: HTHH: HTHT: wingedF: PCIECOD (1.6)
C [auth W]RPN7_1e6wjnW2 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: RPN7_1ECOD (1.6)
C [auth W]KOG1498e6wjnW1 A: extended segmentsX: 26S proteasome regulatory subunits C-terminal helicesH: 26S proteasome regulatory subunit RPN5 C-terminal helix (From Topology)T: 26S proteasome regulatory subunit RPN5 C-terminal helixF: KOG1498ECOD (1.6)
QA [auth D]26Sp45e6wjnD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: 26Sp45ECOD (1.6)
QA [auth D]PRK03992e6wjnD2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PRK03992ECOD (1.6)
QA [auth D]Sigma54_activate6wjnD3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sigma54_activatECOD (1.6)
OA [auth B]26Sp45e6wjnB3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: 26Sp45ECOD (1.6)
OA [auth B]KOG0652_2nde6wjnB2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG0652_2ndECOD (1.6)
OA [auth B]Sigma54_activate6wjnB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sigma54_activatECOD (1.6)
NA [auth A]KOG0729e6wjnA3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: KOG0729ECOD (1.6)
NA [auth A]PRK03992e6wjnA2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PRK03992ECOD (1.6)
NA [auth A]Sigma54_activate6wjnA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sigma54_activatECOD (1.6)
Y [auth T]Proteasomee6wjnT1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
MA [auth t]Proteasomee6wjnt1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
LA [auth s]Proteasomee6wjns1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
X [auth S]Proteasomee6wjnS1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
W [auth R]Proteasomee6wjnR1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
KA [auth r]Proteasomee6wjnr1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
V [auth Q]Proteasomee6wjnQ1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
JA [auth q]Proteasomee6wjnq1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
IA [auth p]Proteasomee6wjnp1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
U [auth P]Proteasomee6wjnP1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
T [auth O]Proteasomee6wjnO1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
HA [auth o]Proteasomee6wjno1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
B [auth V]PCIe6wjnV2 A: alpha arraysX: HTHH: HTHT: wingedF: PCIECOD (1.6)
B [auth V]KOG2581e6wjnV3 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: KOG2581ECOD (1.6)
B [auth V]Rpn3_Ce6wjnV1 A: extended segmentsX: 26S proteasome regulatory subunits C-terminal helicesH: 26S proteasome regulatory subunit RPN3 C-terminal helix (From Topology)T: 26S proteasome regulatory subunit RPN3 C-terminal helixF: Rpn3_CECOD (1.6)
GA [auth n]Proteasomee6wjnn1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
S [auth N]Proteasomee6wjnN1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
R [auth M]Proteasomee6wjnM1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
FA [auth m]Proteasomee6wjnm1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
EA [auth l]Proteasomee6wjnl1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
Q [auth L]Proteasomee6wjnL1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
P [auth K]Proteasomee6wjnK1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
DA [auth k]Proteasomee6wjnk1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
CA [auth j]Proteasomee6wjnj1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
O [auth J]Proteasomee6wjnJ1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
N [auth I]Proteasomee6wjnI1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
BA [auth i]Proteasomee6wjni1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
AA [auth h]Proteasomee6wjnh1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
M [auth H]Proteasomee6wjnH1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
Z [auth g]Proteasomee6wjng1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
L [auth G]Proteasomee6wjnG1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
J [auth d]CSN8_PSD8_EIF3K_C_2e6wjnd2 A: alpha arraysX: HTHH: HTHT: wingedF: CSN8_PSD8_EIF3K_C_2ECOD (1.6)
J [auth d]SAC3_GANP_1ste6wjnd1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: SAC3_GANP_1stECOD (1.6)
A [auth U]KOG2062_2nde6wjnU1 A: beta sandwichesX: 26S proteasome subunit Rpn2 C-terminal domain (From Topology)H: 26S proteasome subunit Rpn2 C-terminal domain (From Topology)T: 26S proteasome subunit Rpn2 C-terminal domainF: KOG2062_2ndECOD (1.6)
A [auth U]KOG2062_1ste6wjnU2 A: alpha superhelicesX: Repetitive alpha hairpinsH: 26S proteasome subunit Rpn2 N-terminal domain (From Topology)T: 26S proteasome subunit Rpn2 N-terminal domainF: KOG2062_1stECOD (1.6)
A [auth U]HEAT_2_3e6wjnU3 A: alpha superhelicesX: Repetitive alpha hairpinsH: Proteasome/cyclosome (PC) repeat (From Topology)T: Proteasome/cyclosome (PC) repeatF: HEAT_2_3ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth Z]PF13012Maintenance of mitochondrial structure and function (MitMem_reg)Maintenance of mitochondrial structure and function- Family
F [auth Z]PF01398JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB)JAB1/Mov34/MPN/PAD-1 ubiquitin proteaseProteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or J ...Proteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or JAMM domain [7]. These are metalloenzymes that function as the ubiquitin isopeptidase/ deubiquitinase in the ubiquitin-based signalling and protein turnover pathways in eukaryotes [7]. Versions of the domain in prokaryotic cognates of the ubiquitin-modification pathway are shown to have a similar role, and the archaeal protein from Haloferax volcanii is found to cleave ubiquitin-like small archaeal modifier proteins (SAMP1/2) from protein conjugates [8,9].
Domain
E [auth Y]PF2115426S proteasome regulatory subunit RPN7/PSMD6 C-terminal helix (RPN7_PSMD6_C)26S proteasome regulatory subunit RPN7/PSMD6 C-terminal helixRPN7/PSDM6 are regulatory subunits from the 26S proteasome. This entry represents the C-terminal helix. Domain
E [auth Y]PF1060226S proteasome subunit RPN7 (RPN7)26S proteasome subunit RPN7- Repeat
E [auth Y]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
D [auth X]PF1805526S proteasome regulatory subunit RPN6 N-terminal domain (RPN6_N)26S proteasome regulatory subunit RPN6 N-terminal domain- Repeat
D [auth X]PF1850326S proteasome subunit RPN6 C-terminal helix domain (RPN6_C_helix)26S proteasome subunit RPN6 C-terminal helix domainThis is the C-terminal helix domain found in RPN6, a component of the 26S proteasome. The C-terminal helices are essential for lid assembly [1, 2]. Domain
D [auth X]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
SA [auth F]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
SA [auth F]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
SA [auth F]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
RA [auth E]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
RA [auth E]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
RA [auth E]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
C [auth W]PF1809826S proteasome regulatory subunit RPN5 C-terminal domain (RPN5_C)26S proteasome regulatory subunit RPN5 C-terminal domainThis is the C-terminal domain of the 26S proteasome regulatory subunit RPN5 proteins.This helical domain can be found adjacent to Pfam:PF01399. The 26S proteasome is the major ATP-dependent protease in eukaryotes. Three subcomplexes form this degrada ...This is the C-terminal domain of the 26S proteasome regulatory subunit RPN5 proteins.This helical domain can be found adjacent to Pfam:PF01399. The 26S proteasome is the major ATP-dependent protease in eukaryotes. Three subcomplexes form this degradation machine: the lid, the base, and the core. The helices found at the C terminus of each lid subunit form a helical bundle that directs the ordered self-assembly of the lid subcomplex. This domain which comprises the tail of RPN5 along with the tail of Rpn9, are important for Rpn12 binding to the lid [1].
Domain
C [auth W]PF22241PSMD12/CSN4, N-terminal (PSMD12-CSN4_N)PSMD12/CSN4, N-terminal- Repeat
C [auth W]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
QA [auth D]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
QA [auth D]PF10075CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K)CSN8/PSMD8/EIF3K family- Family
QA [auth D]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
QA [auth D]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
PA [auth C]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
PA [auth C]PF01398JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB)JAB1/Mov34/MPN/PAD-1 ubiquitin proteaseProteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or J ...Proteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or JAMM domain [7]. These are metalloenzymes that function as the ubiquitin isopeptidase/ deubiquitinase in the ubiquitin-based signalling and protein turnover pathways in eukaryotes [7]. Versions of the domain in prokaryotic cognates of the ubiquitin-modification pathway are shown to have a similar role, and the archaeal protein from Haloferax volcanii is found to cleave ubiquitin-like small archaeal modifier proteins (SAMP1/2) from protein conjugates [8,9].
Domain
PA [auth C]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
PA [auth C]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
OA [auth B]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
OA [auth B]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
OA [auth B]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
NA [auth A]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
NA [auth A]PF2123626S proteasome regulatory subunit 7, OB domain (OB_PRS7)26S proteasome regulatory subunit 7, OB domainThis is the OB domain from 26S proteasome regulatory subunit 7 (PRS7, also known as PSMC2, Rpt1 or MSS1), a component of the 19S proteasome cap [1-5]. These are one of six ATPases of the regulatory particle that form a heterohexameric ring. This doma ...This is the OB domain from 26S proteasome regulatory subunit 7 (PRS7, also known as PSMC2, Rpt1 or MSS1), a component of the 19S proteasome cap [1-5]. These are one of six ATPases of the regulatory particle that form a heterohexameric ring. This domain mediates interactions with USP14 or Ubp6 [2,4].
Domain
NA [auth A]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
NA [auth A]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
MA [auth t],
Y [auth T]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
LA [auth s],
X [auth S]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
KA [auth r],
W [auth R]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
JA [auth q],
V [auth Q]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
IA [auth p],
U [auth P]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
HA [auth o],
T [auth O]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
HA [auth o],
T [auth O]		PF12465Proteasome beta subunits C terminal (Pr_beta_C)Proteasome beta subunits C terminal- Family
B [auth V]PF08375Proteasome regulatory subunit C-terminal (Rpn3_C)Proteasome regulatory subunit C-terminal- Family
B [auth V]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
GA [auth n],
S [auth N]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
FA [auth m],
R [auth M]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
FA [auth m],
R [auth M]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
EA [auth l],
Q [auth L]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
EA [auth l],
Q [auth L]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
DA [auth k],
P [auth K]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
DA [auth k],
P [auth K]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
CA [auth j],
O [auth J]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
CA [auth j],
O [auth J]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
BA [auth i],
N [auth I]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
BA [auth i],
N [auth I]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
AA [auth h],
M [auth H]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
AA [auth h],
M [auth H]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
L [auth G],
Z [auth g]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
L [auth G],
Z [auth g]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
A [auth U]PF13646HEAT repeats (HEAT_2)HEAT repeats- Repeat
A [auth U]PF1800426S proteasome regulatory subunit RPN2 C-terminal domain (RPN2_C)26S proteasome regulatory subunit RPN2 C-terminal domainThis is the C-terminal domain found in S. cerevisiae Rpn2 (26S proteasome regulatory subunit RPN2) as well as other eukaryotic species. A study revealed that the C-terminal 52 residues of the Rpn2 C-terminal domain are responsible for mediating inter ...This is the C-terminal domain found in S. cerevisiae Rpn2 (26S proteasome regulatory subunit RPN2) as well as other eukaryotic species. A study revealed that the C-terminal 52 residues of the Rpn2 C-terminal domain are responsible for mediating interactions with the ubiquitin-binding subunit Rpn13. Futhermore, the extreme C-terminal 20 or 21 residues of Rpn2 (926-945 or 925-945) of S. cerevisiae, were shown to be equally effective at binding Rpn13. Multiple sequence alignments indicate that Rpn2 orthologs are highly conserved in this C-terminal region and share characteristic acidic, aromatic, and proline residues, suggesting a common function. In the structure of Rpn2 from S. cerevisiae , this region is exposed and disordered, and is thus accessible for associating with Rpn13. The Rpn2 binding surface of human Rpn13 has been mapped by nuclear magnetic resonance titration to one surface of its Pru domain [1].
Domain
A [auth U]PF2150526S proteasome subunit RPN2, N-terminal domain (RPN2_N)26S proteasome subunit RPN2, N-terminal domain- Repeat
A [auth U]PF01851Proteasome/cyclosome repeat (PC_rep)Proteasome/cyclosome repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth c]26S proteasome non-ATPase regulatory subunit 14
H [auth b]26S proteasome non-ATPase regulatory subunit 4
G [auth a]26S proteasome non-ATPase regulatory subunit 13
F [auth Z]26S proteasome non-ATPase regulatory subunit 7
E [auth Y]26S proteasome non-ATPase regulatory subunit 6-
D [auth X]26S proteasome non-ATPase regulatory subunit 11
TA [auth f]26S proteasome non-ATPase regulatory subunit 2
SA [auth F]26S proteasome regulatory subunit 6A
RA [auth E]26S proteasome regulatory subunit 10B
C [auth W]26S proteasome non-ATPase regulatory subunit 12-
QA [auth D]26S proteasome regulatory subunit 6B
PA [auth C]26S proteasome regulatory subunit 8
OA [auth B]26S proteasome regulatory subunit 4
NA [auth A]26S proteasome regulatory subunit 7
MA [auth t],
Y [auth T]		Proteasome subunit beta type-4
LA [auth s],
X [auth S]		Proteasome subunit beta type-1-
KA [auth r],
W [auth R]		Proteasome subunit beta type-5
JA [auth q],
V [auth Q]		Proteasome subunit beta type-2-
IA [auth p],
U [auth P]		Proteasome subunit beta type-3-
HA [auth o],
T [auth O]		Proteasome subunit beta type-7
B [auth V]26S proteasome non-ATPase regulatory subunit 3
GA [auth n],
S [auth N]		Proteasome subunit beta type-6
FA [auth m],
R [auth M]		Proteasome subunit alpha type-3
EA [auth l],
Q [auth L]		Proteasome subunit alpha type-1
DA [auth k],
P [auth K]		Proteasome subunit alpha type-5-
CA [auth j],
O [auth J]		Proteasome subunit alpha type-7
BA [auth i],
N [auth I]		Proteasome subunit alpha type-4-
AA [auth h],
M [auth H]		Proteasome subunit alpha type-2-
L [auth G],
Z [auth g]		Proteasome subunit alpha type-6
K [auth e]26S proteasome complex subunit SEM1-
J [auth d]26S proteasome non-ATPase regulatory subunit 8-
A [auth U]26S proteasome non-ATPase regulatory subunit 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth c]IPR05626326S proteasome regulatory subunit RPN11, C-terminal domainDomain
I [auth c]IPR050242JAMM/MPN+ metalloenzymes, peptidase M67AFamily
I [auth c]IPR037518MPN domainDomain
I [auth c]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
H [auth b]IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
H [auth b]IPR02704026S proteasome non-ATPase regulatory subunit 4Family
H [auth b]IPR002035von Willebrand factor, type ADomain
H [auth b]IPR003903Ubiquitin interacting motifConserved Site
H [auth b]IPR049590PSMD4, RAZUL domainDomain
G [auth a]IPR054179PSD13, N-terminalDomain
G [auth a]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
G [auth a]IPR03529826S Proteasome non-ATPase regulatory subunit 13Family
G [auth a]IPR000717Proteasome component (PCI) domainDomain
F [auth Z]IPR03385826S Proteasome non-ATPase regulatory subunit 7/8Family
F [auth Z]IPR024969EIF3F/CSN6-like, C-terminalDomain
F [auth Z]IPR037518MPN domainDomain
F [auth Z]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
E [auth Y]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
E [auth Y]IPR01958526S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1Family
E [auth Y]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
E [auth Y]IPR04954926S proteasome regulatory subunit RPN7/PSMD6, C-terminal helixDomain
E [auth Y]IPR000717Proteasome component (PCI) domainDomain
E [auth Y]IPR04513526S proteasome regulatory subunit Rpn7, N-terminalDomain
D [auth X]IPR05087126S Proteasome and COP9 Signalosome ComponentsFamily
D [auth X]IPR0407806S proteasome subunit Rpn6, C-terminal helix domainDomain
D [auth X]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
D [auth X]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
D [auth X]IPR04077326S proteasome regulatory subunit Rpn6, N-terminalDomain
D [auth X]IPR000717Proteasome component (PCI) domainDomain
TA [auth f]IPR04143326S proteasome non-ATPase regulatory subunit RPN1, C-terminalDomain
TA [auth f]IPR016024Armadillo-type foldHomologous Superfamily
TA [auth f]IPR002015Proteasome/cyclosome repeatRepeat
TA [auth f]IPR01664326S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunitFamily
TA [auth f]IPR011989Armadillo-like helicalHomologous Superfamily
TA [auth f]IPR040892RPN1, N-terminalDomain
SA [auth F]IPR05022126S Proteasome Regulatory ATPaseFamily
SA [auth F]IPR003593AAA+ ATPase domainDomain
SA [auth F]IPR003959ATPase, AAA-type, coreDomain
SA [auth F]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
SA [auth F]IPR041569AAA ATPase, AAA+ lid domainDomain
SA [auth F]IPR032501Proteasomal ATPase, second OB domainDomain
SA [auth F]IPR003960ATPase, AAA-type, conserved siteConserved Site
SA [auth F]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
RA [auth E]IPR05022126S Proteasome Regulatory ATPaseFamily
RA [auth E]IPR003593AAA+ ATPase domainDomain
RA [auth E]IPR003959ATPase, AAA-type, coreDomain
RA [auth E]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
RA [auth E]IPR041569AAA ATPase, AAA+ lid domainDomain
RA [auth E]IPR032501Proteasomal ATPase, second OB domainDomain
RA [auth E]IPR003960ATPase, AAA-type, conserved siteConserved Site
RA [auth E]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth W]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
C [auth W]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
C [auth W]IPR000717Proteasome component (PCI) domainDomain
C [auth W]IPR04089626S proteasome regulatory subunit RPN5, C-terminal domainDomain
C [auth W]IPR04013426S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4Family
C [auth W]IPR054559PSMD12/CSN4-like, N-terminalDomain
QA [auth D]IPR05022126S Proteasome Regulatory ATPaseFamily
QA [auth D]IPR041569AAA ATPase, AAA+ lid domainDomain
QA [auth D]IPR032501Proteasomal ATPase, second OB domainDomain
QA [auth D]IPR003960ATPase, AAA-type, conserved siteConserved Site
QA [auth D]IPR003593AAA+ ATPase domainDomain
QA [auth D]IPR003959ATPase, AAA-type, coreDomain
QA [auth D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QA [auth D]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
PA [auth C]IPR05022126S Proteasome Regulatory ATPaseFamily
PA [auth C]IPR003593AAA+ ATPase domainDomain
PA [auth C]IPR003959ATPase, AAA-type, coreDomain
PA [auth C]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
PA [auth C]IPR041569AAA ATPase, AAA+ lid domainDomain
PA [auth C]IPR032501Proteasomal ATPase, second OB domainDomain
PA [auth C]IPR003960ATPase, AAA-type, conserved siteConserved Site
PA [auth C]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
OA [auth B]IPR05022126S Proteasome Regulatory ATPaseFamily
OA [auth B]IPR041569AAA ATPase, AAA+ lid domainDomain
OA [auth B]IPR032501Proteasomal ATPase, second OB domainDomain
OA [auth B]IPR003960ATPase, AAA-type, conserved siteConserved Site
OA [auth B]IPR003593AAA+ ATPase domainDomain
OA [auth B]IPR003959ATPase, AAA-type, coreDomain
OA [auth B]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
OA [auth B]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
NA [auth A]IPR05022126S Proteasome Regulatory ATPaseFamily
NA [auth A]IPR003593AAA+ ATPase domainDomain
NA [auth A]IPR003959ATPase, AAA-type, coreDomain
NA [auth A]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
NA [auth A]IPR04872326S proteasome regulatory subunit 7-like, OB domainDomain
NA [auth A]IPR041569AAA ATPase, AAA+ lid domainDomain
NA [auth A]IPR003960ATPase, AAA-type, conserved siteConserved Site
NA [auth A]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth t],
Y [auth T]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
MA [auth t],
Y [auth T]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
MA [auth t],
Y [auth T]		IPR023333Proteasome B-type subunitFamily
MA [auth t],
Y [auth T]		IPR016295Proteasome subunit beta 4Family
MA [auth t],
Y [auth T]		IPR001353Proteasome, subunit alpha/betaFamily
LA [auth s],
X [auth S]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
LA [auth s],
X [auth S]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
LA [auth s],
X [auth S]		IPR023333Proteasome B-type subunitFamily
LA [auth s],
X [auth S]		IPR001353Proteasome, subunit alpha/betaFamily
KA [auth r],
W [auth R]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
KA [auth r],
W [auth R]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
KA [auth r],
W [auth R]		IPR023333Proteasome B-type subunitFamily
KA [auth r],
W [auth R]		IPR001353Proteasome, subunit alpha/betaFamily
KA [auth r],
W [auth R]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
JA [auth q],
V [auth Q]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
JA [auth q],
V [auth Q]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
JA [auth q],
V [auth Q]		IPR023333Proteasome B-type subunitFamily
JA [auth q],
V [auth Q]		IPR001353Proteasome, subunit alpha/betaFamily
JA [auth q],
V [auth Q]		IPR035206Proteasome subunit beta 2Family
IA [auth p],
U [auth P]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
IA [auth p],
U [auth P]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
IA [auth p],
U [auth P]		IPR023333Proteasome B-type subunitFamily
IA [auth p],
U [auth P]		IPR001353Proteasome, subunit alpha/betaFamily
IA [auth p],
U [auth P]		IPR033811Proteasome beta 3 subunitFamily
HA [auth o],
T [auth O]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
HA [auth o],
T [auth O]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
HA [auth o],
T [auth O]		IPR024689Proteasome beta subunit, C-terminalDomain
HA [auth o],
T [auth O]		IPR023333Proteasome B-type subunitFamily
HA [auth o],
T [auth O]		IPR001353Proteasome, subunit alpha/betaFamily
HA [auth o],
T [auth O]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
B [auth V]IPR01358626S proteasome non-ATPase regulatory subunit 3, C-terminalDomain
B [auth V]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
B [auth V]IPR050756COP9 signalosome complex subunit 3Family
B [auth V]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
B [auth V]IPR000717Proteasome component (PCI) domainDomain
GA [auth n],
S [auth N]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
GA [auth n],
S [auth N]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
GA [auth n],
S [auth N]		IPR023333Proteasome B-type subunitFamily
GA [auth n],
S [auth N]		IPR001353Proteasome, subunit alpha/betaFamily
GA [auth n],
S [auth N]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
FA [auth m],
R [auth M]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
FA [auth m],
R [auth M]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
FA [auth m],
R [auth M]		IPR050115Proteasome subunit alphaFamily
FA [auth m],
R [auth M]		IPR023332Proteasome alpha-type subunitFamily
FA [auth m],
R [auth M]		IPR001353Proteasome, subunit alpha/betaFamily
EA [auth l],
Q [auth L]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
EA [auth l],
Q [auth L]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
EA [auth l],
Q [auth L]		IPR050115Proteasome subunit alphaFamily
EA [auth l],
Q [auth L]		IPR035144Proteasome subunit alpha 1Family
EA [auth l],
Q [auth L]		IPR023332Proteasome alpha-type subunitFamily
EA [auth l],
Q [auth L]		IPR001353Proteasome, subunit alpha/betaFamily
DA [auth k],
P [auth K]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
DA [auth k],
P [auth K]		IPR033812Proteasome subunit alpha5Family
DA [auth k],
P [auth K]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
DA [auth k],
P [auth K]		IPR050115Proteasome subunit alphaFamily
DA [auth k],
P [auth K]		IPR023332Proteasome alpha-type subunitFamily
DA [auth k],
P [auth K]		IPR001353Proteasome, subunit alpha/betaFamily
CA [auth j],
O [auth J]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
CA [auth j],
O [auth J]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
CA [auth j],
O [auth J]		IPR050115Proteasome subunit alphaFamily
CA [auth j],
O [auth J]		IPR023332Proteasome alpha-type subunitFamily
CA [auth j],
O [auth J]		IPR001353Proteasome, subunit alpha/betaFamily
BA [auth i],
N [auth I]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
BA [auth i],
N [auth I]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
BA [auth i],
N [auth I]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
BA [auth i],
N [auth I]		IPR050115Proteasome subunit alphaFamily
BA [auth i],
N [auth I]		IPR023332Proteasome alpha-type subunitFamily
BA [auth i],
N [auth I]		IPR001353Proteasome, subunit alpha/betaFamily
AA [auth h],
M [auth H]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
AA [auth h],
M [auth H]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
AA [auth h],
M [auth H]		IPR050115Proteasome subunit alphaFamily
AA [auth h],
M [auth H]		IPR023332Proteasome alpha-type subunitFamily
AA [auth h],
M [auth H]		IPR001353Proteasome, subunit alpha/betaFamily
L [auth G],
Z [auth g]		IPR034642Proteasome subunit alpha6Family
L [auth G],
Z [auth g]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
L [auth G],
Z [auth g]		IPR050115Proteasome subunit alphaFamily
L [auth G],
Z [auth g]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
L [auth G],
Z [auth g]		IPR023332Proteasome alpha-type subunitFamily
L [auth G],
Z [auth g]		IPR001353Proteasome, subunit alpha/betaFamily
K [auth e]IPR007834DSS1/SEM1Family
J [auth d]IPR000717Proteasome component (PCI) domainDomain
J [auth d]IPR00674626S proteasome non-ATPase regulatory subunit Rpn12Family
J [auth d]IPR033464CSN8/PSMD8/EIF3KDomain
A [auth U]IPR04062326S proteasome regulatory subunit RPN2, C-terminalDomain
A [auth U]IPR016024Armadillo-type foldHomologous Superfamily
A [auth U]IPR002015Proteasome/cyclosome repeatRepeat
A [auth U]IPR011989Armadillo-like helicalHomologous Superfamily
A [auth U]IPR04857026S proteasome non-ATPase regulatory subunit 1/RPN2, N-terminal domainDomain
A [auth U]IPR01664226S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunitFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
I [auth c]Pharos:  O00487
H [auth b]Pharos:  P55036
G [auth a]Pharos:  Q9UNM6
F [auth Z]Pharos:  P51665
E [auth Y]Pharos:  Q15008
D [auth X]Pharos:  O00231
TA [auth f]Pharos:  Q13200
SA [auth F]Pharos:  P17980
C [auth W]Pharos:  O00232
QA [auth D]Pharos:  P43686
PA [auth C]Pharos:  P62195
NA [auth A]Pharos:  P35998
MA [auth t],
Y [auth T]		Pharos:  P28070
LA [auth s],
X [auth S]		Pharos:  P20618
KA [auth r],
W [auth R]		Pharos:  P28074
JA [auth q],
V [auth Q]		Pharos:  P49721
IA [auth p],
U [auth P]		Pharos:  P49720
HA [auth o],
T [auth O]		Pharos:  Q99436
B [auth V]Pharos:  O43242
GA [auth n],
S [auth N]		Pharos:  P28072
FA [auth m],
R [auth M]		Pharos:  P25788
EA [auth l],
Q [auth L]		Pharos:  P25786
DA [auth k],
P [auth K]		Pharos:  P28066
CA [auth j],
O [auth J]		Pharos:  O14818
BA [auth i],
N [auth I]		Pharos:  P25789
AA [auth h],
M [auth H]		Pharos:  P25787
L [auth G],
Z [auth g]		Pharos:  P60900
K [auth e]Pharos:  P60896
J [auth d]Pharos:  P48556
A [auth U]Pharos:  Q99460