6WEG | pdb_00006weg

Structure of Ft (MglA-SspA)-ppGpp-PigR peptide complex

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C [auth D]	d6wegd2	All alpha proteins	GST C-terminal domain-like	GST C-terminal domain-like	automated matches	automated matches	(Francisella tularensis subsp. tularensis SCHU S4 ) [TaxId: 177416 ],	SCOPe (2.08)
C [auth D]	d6wegd1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Francisella tularensis subsp. tularensis SCHU S4 ) [TaxId: 177416 ],	SCOPe (2.08)
C [auth D]	d6wegd3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Francisella tularensis subsp. tularensis SCHU S4 ) [TaxId: 177416 ],	SCOPe (2.08)
A [auth C]	d6wegc2	All alpha proteins	GST C-terminal domain-like	GST C-terminal domain-like	automated matches	automated matches	(Francisella tularensis subsp. tularensis SCHU S4 ) [TaxId: 177416 ],	SCOPe (2.08)
A [auth C]	d6wegc1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Francisella tularensis subsp. tularensis SCHU S4 ) [TaxId: 177416 ],	SCOPe (2.08)
A [auth C]	d6wegc3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Francisella tularensis subsp. tularensis SCHU S4 ) [TaxId: 177416 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth B]	LRR_1,LRR_8	e6wegB1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: LRR_1,LRR_8	ECOD (v294.1)
B [auth A]	LRR_1,LRR_8	e6wegA1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: LRR_1,LRR_8	ECOD (v294.1)
C [auth D]	LRR_1,LRR_8	e6wegD1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: LRR_1,LRR_8	ECOD (v294.1)
A [auth C]	LRR_1,LRR_8	e6wegC1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: LRR_1,LRR_8	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth A], D [auth B]	PF22420	Macrophage Locus Protein A, C-terminal domain (MglA_C)	Macrophage Locus Protein A, C-terminal domain	This entry represents the Macrophage Locus Protein A (MglA) C-terminal domain from Francisella tularensis. MglA interact with both RNA polymerase (RNAP) and the pathogenicity island (FPI) gene regulator to activate FPI transcription [1,2,3].	Domain
B [auth A], D [auth B]	PF13409	Glutathione S-transferase, N-terminal domain (GST_N_2)	Glutathione S-transferase, N-terminal domain	This family is closely related to Pfam:PF02798.	Domain
A [auth C], C [auth D]	PF13417	Glutathione S-transferase, N-terminal domain (GST_N_3)	Glutathione S-transferase, N-terminal domain		Domain
A [auth C], C [auth D]	PF00043	Glutathione S-transferase, C-terminal domain (GST_C)	Glutathione S-transferase, C-terminal domain	GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins ...	GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain [1]. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E [auth P]	Peptide	-	-	-
B [auth A], D [auth B]	MglA	-	-	-
A [auth C], C [auth D]	Stringent starvation protein A, regulator of transcription	cation binding ion binding binding metal ion binding small molecule binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth A], D [auth B]	IPR054493	Macrophage growth locus, subunit A, C-terminal domain	Domain
B [auth A], D [auth B]	IPR004045	Glutathione S-transferase, N-terminal	Domain
B [auth A], D [auth B]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
A [auth C], C [auth D]	IPR004046	Glutathione S-transferase, C-terminal	Domain
A [auth C], C [auth D]	IPR050983	Glutathione S-transferase Omega/HSP26	Family
A [auth C], C [auth D]	IPR010987	Glutathione S-transferase, C-terminal-like	Domain
A [auth C], C [auth D]	IPR036282	Glutathione S-transferase, C-terminal domain superfamily	Homologous Superfamily
A [auth C], C [auth D]	IPR004045	Glutathione S-transferase, N-terminal	Domain
A [auth C], C [auth D]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
A [auth C], C [auth D]	IPR040079	Glutathione transferase family	Family
A [auth C], C [auth D]	IPR034342	Stringent starvation protein A, C-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.