complex structure of PHF1
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| Z [auth MC] | DUF4537 | e6watMC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| Y [auth MA] | DUF4537 | e6watMA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| X [auth LC] | DUF4537 | e6watLC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| W [auth LA] | DUF4537 | e6watLA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| V [auth KC] | DUF4537 | e6watKC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| U [auth KA] | DUF4537 | e6watKA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| T [auth JC] | DUF4537 | e6watJC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| S [auth JA] | DUF4537 | e6watJA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| R [auth IC] | DUF4537 | e6watIC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| Q [auth IA] | DUF4537 | e6watIA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| P [auth HC] | DUF4537 | e6watHC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| O [auth HA] | DUF4537 | e6watHA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| N [auth GC] | DUF4537 | e6watGC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| M [auth GA] | DUF4537 | e6watGA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| L [auth FC] | DUF4537 | e6watFC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| K [auth FA] | DUF4537 | e6watFA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| J [auth EC] | DUF4537 | e6watEC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| I [auth EA] | DUF4537 | e6watEA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| H [auth DC] | DUF4537 | e6watDC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| G [auth DA] | DUF4537 | e6watDA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| F [auth CC] | DUF4537 | e6watCC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| E [auth CA] | DUF4537 | e6watCA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| DA [auth OC] | DUF4537 | e6watOC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| D [auth BC] | DUF4537 | e6watBC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| CA [auth OA] | DUF4537 | e6watOA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| C [auth BA] | DUF4537 | e6watBA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| BA [auth NC] | DUF4537 | e6watNC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| B [auth AC] | DUF4537 | e6watAC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| AA [auth NA] | DUF4537 | e6watNA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
| A [auth AA] | DUF4537 | e6watAA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF18104 | Jumonji domain-containing protein 2A Tudor domain (Tudor_2) | Jumonji domain-containing protein 2A Tudor domain | This is the tudor domain found in histone demethylase Jumonji domain-containing protein 2A (JMJD2A). Structure and function analysis indicate that this domain can recognize equally well two unrelated histone peptides, H3K4me3 and H4K20me3, by means o ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR009072 | Histone-fold | Homologous Superfamily | |
| IPR007125 | Core Histone H2A/H2B/H3 domain | Domain | |
| IPR000164 | Histone H3/CENP-A | Family | |
| IPR025894 | Polycomb-like MTF2 factor 2, C-terminal domain | Domain | |
| IPR001965 | Zinc finger, PHD-type | Domain | |
| IPR002999 | Tudor domain | Domain | |
| IPR047010 | PHD finger protein 1, PHD finger 2 | Domain | |
| IPR019787 | Zinc finger, PHD-finger | Domain | |
| IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily | |
| IPR019786 | Zinc finger, PHD-type, conserved site | Conserved Site | |
| IPR031202 | PHD finger protein 1, PHD finger 1 | Domain | |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
| IPR047399 | PHD finger protein 1, Tudor domain | Domain | |
| IPR040477 | Lysine-specific demethylase 4-like, Tudor domain | Domain |














