6W78

crystal structure of a plant ice-binding protein

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad6w78a1 Alpha and beta proteins (a/b) Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like automated matches automated matches Wild carrot (Daucus carota ) [TaxId: 4039 ], SCOPe (2.08)
Ad6w78a2 Artifacts Tags Tags Tags C-terminal Tags Wild carrot (Daucus carota ) [TaxId: 4039 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyPGIP-like8102402 4000455 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyL domain-like8102403 3001010 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00560e6w78A1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF00560ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF13855Leucine rich repeat (LRR_8)Leucine rich repeat- Repeat
PF08263Leucine rich repeat N-terminal domain (LRRNT_2)Leucine rich repeat N-terminal domain- Family
PF00560Leucine Rich Repeat (LRR_1)Leucine Rich Repeat- Repeat

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
IPR001611Leucine-rich repeatRepeat
IPR013210Leucine-rich repeat-containing N-terminal, plant-typeDomain