6W2S | pdb_00006w2s

Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the open state (Class 1)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
M [auth P]	SCOP2B Superfamily	Translational machinery components	8097824	3000571	SCOP2B (2022-06-29)
W [auth L]	SCOP2B Superfamily	Winged helix DNA-binding domain	8055720	3000034	SCOP2B (2022-06-29)
CA [auth U]	SCOP2B Superfamily	Winged helix DNA-binding domain	8089322	3000034	SCOP2B (2022-06-29)
I [auth J]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8053075	3000433	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Alpha-L RNA-binding motif	8052745	3001473	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8052747	3000334	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Nucleic acid-binding proteins	8052746	3000135	SCOP2B (2022-06-29)
NA [auth 5]	SCOP2B Superfamily	EIF3 subunit F C-terminal domain-like	8053287	3002167	SCOP2B (2022-06-29)
NA [auth 5]	SCOP2B Superfamily	JAB1/MPN domain-like	8053286	3001105	SCOP2B (2022-06-29)
D [auth C]	SCOP2B Superfamily	Ribosomal S3Ae-like	8053216	3002166	SCOP2B (2022-06-29)
MA [auth 4]	SCOP2B Superfamily	JAB1/MPN domain-like	8053240	3001105	SCOP2B (2022-06-29)
MA [auth 4]	SCOP2B Superfamily	EIF3 subunit F C-terminal domain-like	8053239	3002167	SCOP2B (2022-06-29)
LA [auth 3]	SCOP2B Superfamily	Winged helix DNA-binding domain	8091488	3000034	SCOP2B (2022-06-29)
LA [auth 3]	SCOP2B Superfamily	TPR-like	8091484	3001345	SCOP2B (2022-06-29)
KA [auth 2]	SCOP2B Superfamily	TPR-like	8093045	3001345	SCOP2B (2022-06-29)
KA [auth 2]	SCOP2B Superfamily	Winged helix DNA-binding domain	8093052	3000034	SCOP2B (2022-06-29)
GA [auth e]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8052584	3000068	SCOP2B (2022-06-29)
FA [auth d]	SCOP2B Superfamily	Nucleic acid-binding proteins	8095265	3000135	SCOP2B (2022-06-29)
EA [auth a]	SCOP2B Superfamily	Winged helix DNA-binding domain	8090991	3000034	SCOP2B (2022-06-29)
DA [auth V]	SCOP2B Superfamily	Ribosomal protein S10	8097814	3001336	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	SIS domain/Ribosomal protein S2-like	8097826	3001397	SCOP2B (2022-06-29)
BA [auth T]	SCOP2B Superfamily	S13-like H2TH domain	8101439	3000053	SCOP2B (2022-06-29)
Z [auth R]	SCOP2B Superfamily	Ribosomal protein S5 domain 2-like	8082683	3000100	SCOP2B (2022-06-29)
X [auth N]	SCOP2B Superfamily	L30e-like	8063980	3001739	SCOP2B (2022-06-29)
V [auth G]	SCOP2B Superfamily	Ribosomal protein S7	8066001	3000799	SCOP2B (2022-06-29)
T [auth f]	SCOP2B Superfamily	Ribosomal protein S30e-like	8053455	3002190	SCOP2B (2022-06-29)
R [auth b]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8053150	3000068	SCOP2B (2022-06-29)
O [auth X]	SCOP2B Superfamily	Ribosomal protein S8	8079081	3000709	SCOP2B (2022-06-29)
L [auth O]	SCOP2B Superfamily	Homeodomain-like	8052970	3000001	SCOP2B (2022-06-29)
L [auth O]	SCOP2B Superfamily	S15/NS1 RNA-binding domain	8052971	3001284	SCOP2B (2022-06-29)
K [auth M]	SCOP2B Superfamily	Ribosomal S17 N-terminal domain-like	8052708	3002138	SCOP2B (2022-06-29)
K [auth M]	SCOP2B Superfamily	Nucleic acid-binding proteins	8052707	3000135	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J [auth K]	S4	e6w2sK1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: S4	ECOD (1.6)
M [auth P]	Ribosomal_S11	e6w2sP1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_S11	ECOD (1.6)
W [auth L]	S10_plectin	e6w2sL1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: S10_plectin	ECOD (1.6)
CA [auth U]	Ribosomal_S19e	e6w2sU1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S19e	ECOD (1.6)
OA [auth 6]	CSN8_PSD8_EIF3K_C	e6w2s61	A: alpha arrays	X: HTH	H: HTH	T: winged	F: CSN8_PSD8_EIF3K_C	ECOD (1.6)
OA [auth 6]	SAC3_GANP_1st	e6w2s62	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: SAC3_GANP_1st	ECOD (1.6)
I [auth J]	Ribosomal_S8e	e6w2sJ1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_S8e	ECOD (1.6)
H [auth I]	Ribosomal_S7e_N	e6w2sI1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_N	ECOD (1.6)
H [auth I]	Ribosomal_S7e_C_1	e6w2sI2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_C_1	ECOD (1.6)
G [auth H]	Ribosomal_S6e	e6w2sH1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_S6e	ECOD (1.6)
F	Ribosomal_S4e	e6w2sF2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S4e	ECOD (1.6)
F	40S_S4_C	e6w2sF3	A: beta barrels	X: SH3	H: SH3	T: SH3	F: 40S_S4_C	ECOD (1.6)
F	RS4NT	e6w2sF1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: RS4NT	ECOD (1.6)
E [auth D]	Ribosomal_S5_C_1	e6w2sD3	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S5_C_1	ECOD (1.6)
E [auth D]	Ribosomal_S5_3	e6w2sD2	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: Ribosomal_S5_3	ECOD (1.6)
E [auth D]	Ribosomal_S5_2	e6w2sD1	A: extended segments	X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	T: N-terminal region in 40S ribosomal protein rpS2 (S5p)	F: Ribosomal_S5_2	ECOD (1.6)
NA [auth 5]	JAB_1	e6w2s51	A: a+b three layers	X: Cytidine deaminase-like (From Topology)	H: Cytidine deaminase-like (From Topology)	T: Cytidine deaminase-like	F: JAB_1	ECOD (1.6)
NA [auth 5]	KOG1560	e6w2s52	A: extended segments	X: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology)	H: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology)	T: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	F: KOG1560	ECOD (1.6)
D [auth C]	Ribosomal_S3Ae_N	e6w2sC2	A: beta barrels	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain (From Topology)	T: 40S ribosomal protein S3A N-terminal domain	F: Ribosomal_S3Ae_N	ECOD (1.6)
D [auth C]	Ribosomal_S3Ae_C	e6w2sC1	A: a+b two layers	X: T-fold	H: 40S ribosomal protein S3A C-terminal domain (From Topology)	T: 40S ribosomal protein S3A C-terminal domain	F: Ribosomal_S3Ae_C	ECOD (1.6)
MA [auth 4]	JAB_1	e6w2s42	A: a+b three layers	X: Cytidine deaminase-like (From Topology)	H: Cytidine deaminase-like (From Topology)	T: Cytidine deaminase-like	F: JAB_1	ECOD (1.6)
MA [auth 4]	MitMem_reg	e6w2s41	A: extended segments	X: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology)	H: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology)	T: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	F: MitMem_reg	ECOD (1.6)
LA [auth 3]	PCI	e6w2s32	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PCI	ECOD (1.6)
LA [auth 3]	eIF3_N	e6w2s31	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: eIF3_N	ECOD (1.6)
LA [auth 3]	KOG2758	e6w2s33	A: extended segments	X: 26S proteasome regulatory subunits C-terminal helices	H: 26S proteasome regulatory subunit RPN7 C-terminal helix (From Topology)	T: 26S proteasome regulatory subunit RPN7 C-terminal helix	F: KOG2758	ECOD (1.6)
KA [auth 2]	PCI	e6w2s21	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PCI	ECOD (1.6)
KA [auth 2]	eIF-3c_N	e6w2s22	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: eIF-3c_N	ECOD (1.6)
IA [auth h]	DUF1899	e6w2sh1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: DUF1899	ECOD (1.6)
HA [auth g]	Ribosomal_S27	e6w2sg1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27	ECOD (1.6)
GA [auth e]	Ribosomal_S14_2	e6w2se1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S14_2	ECOD (1.6)
FA [auth d]	Ribosomal_S28e	e6w2sd1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S28e	ECOD (1.6)
EA [auth a]	Ribosomal_S25	e6w2sa1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S25	ECOD (1.6)
DA [auth V]	Ribosomal_S10_1	e6w2sV1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S10 (From Topology)	T: Ribosomal protein S10	F: Ribosomal_S10_1	ECOD (1.6)
C [auth B]	Ribosomal_S2_2	e6w2sB1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Ribosomal protein S2/SIS domain (From Topology)	T: Ribosomal protein S2/SIS domain	F: Ribosomal_S2_2	ECOD (1.6)
BA [auth T]	Ribosomal_S13	e6w2sT1	A: alpha arrays	X: HhH/H2TH	H: H2TH (From Topology)	T: H2TH	F: Ribosomal_S13	ECOD (1.6)
AA [auth S]	Ribosomal_S17e	e6w2sS1	A: alpha arrays	X: HTH	H: HTH	T: FF domain	F: Ribosomal_S17e	ECOD (1.6)
Z [auth R]	Ribosomal_S9	e6w2sR1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S9	ECOD (1.6)
Y [auth Q]	Ribosomal_S19	e6w2sQ1	A: a+b two layers	X: Ribosomal protein S19 (From Topology)	H: Ribosomal protein S19 (From Topology)	T: Ribosomal protein S19	F: Ribosomal_S19	ECOD (1.6)
X [auth N]	Ribosomal_L7Ae	e6w2sN1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae	ECOD (1.6)
V [auth G]	Ribosomal_S7_1	e6w2sG1	A: alpha arrays	X: Ribosomal protein S7 (From Topology)	H: Ribosomal protein S7 (From Topology)	T: Ribosomal protein S7	F: Ribosomal_S7_1	ECOD (1.6)
U [auth E]	Ribosomal_S3_C	e6w2sE2	A: a+b two layers	X: T-fold	H: Ribosomal protein S3-C (From Topology)	T: Ribosomal protein S3-C	F: Ribosomal_S3_C	ECOD (1.6)
U [auth E]	KH_2_3	e6w2sE1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: KH_2_3	ECOD (1.6)
T [auth f]	Ribosomal_S30	e6w2sf1	A: extended segments	X: 40S ribosomal protein S30 (S30e) (From Topology)	H: 40S ribosomal protein S30 (S30e) (From Topology)	T: 40S ribosomal protein S30 (S30e)	F: Ribosomal_S30	ECOD (1.6)
S [auth c]	Ribosomal_S27e	e6w2sc1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27e	ECOD (1.6)
R [auth b]	Ribosomal_S26e	e6w2sb1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S26e	ECOD (1.6)
Q [auth Z]	Ribosomal_S24e	e6w2sZ1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_S24e	ECOD (1.6)
P [auth Y]	Ribosom_S12_S23	e6w2sY1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosom_S12_S23	ECOD (1.6)
O [auth X]	Ribosomal_S8_N_1	e6w2sX2	A: a+b two layers	X: R3H domain-like	H: Ribosomal protein S8, N-terminal domain (From Topology)	T: Ribosomal protein S8, N-terminal domain	F: Ribosomal_S8_N_1	ECOD (1.6)
O [auth X]	Ribosomal_S8_C_1	e6w2sX1	A: a+b two layers	X: Ribosomal protein S8, C-terminal domain (From Topology)	H: Ribosomal protein S8, C-terminal domain (From Topology)	T: Ribosomal protein S8, C-terminal domain	F: Ribosomal_S8_C_1	ECOD (1.6)
N [auth W]	Ribosomal_S21e	e6w2sW1	A: a+b two layers	X: 40S ribosomal protein rpS21 (S21e) (From Topology)	H: 40S ribosomal protein rpS21 (S21e) (From Topology)	T: 40S ribosomal protein rpS21 (S21e)	F: Ribosomal_S21e	ECOD (1.6)
L [auth O]	Ribosomal_S13_N	e6w2sO2	A: alpha arrays	X: HTH	H: 40S ribosomal protein S13 N-terminal domain (From Topology)	T: 40S ribosomal protein S13 N-terminal domain	F: Ribosomal_S13_N	ECOD (1.6)
L [auth O]	Ribosomal_S15_2	e6w2sO1	A: alpha arrays	X: S15/NS1 RNA-binding domain (From Topology)	H: S15/NS1 RNA-binding domain (From Topology)	T: S15/NS1 RNA-binding domain	F: Ribosomal_S15_2	ECOD (1.6)
K [auth M]	Ribosomal_S17_1	e6w2sM1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S17_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
J [auth K]	PF00163	Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)	Ribosomal protein S4/S9 N-terminal domain	-	Family
J [auth K]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
M [auth P]	PF00411	Ribosomal protein S11 (Ribosomal_S11)	Ribosomal protein S11	-	Family
W [auth L]	PF03501	Plectin/S10 domain (S10_plectin)	Plectin/S10 domain	This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.	Domain
CA [auth U]	PF01090	Ribosomal protein S19e (Ribosomal_S19e)	Ribosomal protein S19e	-	Family
OA [auth 6]	PF10075	CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K)	CSN8/PSMD8/EIF3K family	-	Family
I [auth J]	PF01201	Ribosomal protein S8e (Ribosomal_S8e)	Ribosomal protein S8e	-	Family
G [auth H]	PF01092	Ribosomal protein S6e (Ribosomal_S6e)	Ribosomal protein S6e	-	Family
G [auth H]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
F	PF00900	Ribosomal family S4e (Ribosomal_S4e)	Ribosomal family S4e	-	Family
F	PF16121	40S ribosomal protein S4 C-terminus (40S_S4_C)	40S ribosomal protein S4 C-terminus	-	Family
F	PF08071	RS4NT (NUC023) domain (RS4NT)	RS4NT (NUC023) domain	This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].	Domain
F	PF00467	KOW motif (KOW)	KOW motif	-	Family
E [auth D]	PF03719	Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)	Ribosomal protein S5, C-terminal domain		Domain
E [auth D]	PF00333	Ribosomal protein S5, N-terminal domain (Ribosomal_S5)	Ribosomal protein S5, N-terminal domain		Domain
QA [auth 8]	PF18005	eIF3 subunit M, C-terminal helix (eIF3m_C_helix)	eIF3 subunit M, C-terminal helix	This is the C-terminal helix domain found in Eukaryotic translation initiation factor 3 subunit M (eIF3m). In mammalian eIF3a, the C-terminal helix following the PCI domain is involved in interactions with other core subunits [1].	Domain
QA [auth 8]	PF01399	PCI domain (PCI)	PCI domain	This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1].	Domain
NA [auth 5]	PF19445	C-terminal region of eIF3h (eIF3h_C)	C-terminal region of eIF3h	-	Family
NA [auth 5]	PF01398	JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB)	JAB1/Mov34/MPN/PAD-1 ubiquitin protease	Proteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or J ...	Proteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or JAMM domain [7]. These are metalloenzymes that function as the ubiquitin isopeptidase/ deubiquitinase in the ubiquitin-based signalling and protein turnover pathways in eukaryotes [7]. Versions of the domain in prokaryotic cognates of the ubiquitin-modification pathway are shown to have a similar role, and the archaeal protein from Haloferax volcanii is found to cleave ubiquitin-like small archaeal modifier proteins (SAMP1/2) from protein conjugates [8,9].	Domain
D [auth C]	PF01667	Ribosomal protein S27 (Ribosomal_S27e)	Ribosomal protein S27	-	Family
MA [auth 4]	PF13012	Maintenance of mitochondrial structure and function (MitMem_reg)	Maintenance of mitochondrial structure and function	-	Family
MA [auth 4]	PF01398	JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB)	JAB1/Mov34/MPN/PAD-1 ubiquitin protease	Proteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or J ...	Proteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or JAMM domain [7]. These are metalloenzymes that function as the ubiquitin isopeptidase/ deubiquitinase in the ubiquitin-based signalling and protein turnover pathways in eukaryotes [7]. Versions of the domain in prokaryotic cognates of the ubiquitin-modification pathway are shown to have a similar role, and the archaeal protein from Haloferax volcanii is found to cleave ubiquitin-like small archaeal modifier proteins (SAMP1/2) from protein conjugates [8,9].	Domain
LA [auth 3]	PF09440	eIF3 subunit 6 N terminal domain (eIF3_N)	eIF3 subunit 6 N terminal domain	This is the N terminal domain of subunit 6 translation initiation factor eIF3.	Domain
LA [auth 3]	PF21357	Eukaryotic translation initiation factor 3 subunit E, C-terminal (EIF3E_C)	Eukaryotic translation initiation factor 3 subunit E, C-terminal	Eukaryotic translation initiation factor 3 subunit E (EIF3E) is a component of the EIF3 complex, involved in protein synthesis. This is the C-terminal helical tail of EIF3E [1].	Domain
LA [auth 3]	PF01399	PCI domain (PCI)	PCI domain	This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1].	Domain
KA [auth 2]	PF01399	PCI domain (PCI)	PCI domain	This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1].	Domain
JA [auth 1]	PF22591	eIF3a, PCI domain, TPR-like region (eIF3a_PCI_TPR-like)	eIF3a, PCI domain, TPR-like region	-	Repeat
JA [auth 1]	PF01399	PCI domain (PCI)	PCI domain	This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1].	Domain
DA [auth V]	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
C [auth B]	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family
C [auth B]	PF16122	40S ribosomal protein SA C-terminus (40S_SA_C)	40S ribosomal protein SA C-terminus	-	Family
BA [auth T]	PF00416	Ribosomal protein S13/S18 (Ribosomal_S13)	Ribosomal protein S13/S18	-	Family
Z [auth R]	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
Y [auth Q]	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19		Domain
X [auth N]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
V [auth G]	PF00177	Ribosomal protein S7p/S5e (Ribosomal_S7)	Ribosomal protein S7p/S5e	This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.	Domain
V [auth G]	PF01599	Ribosomal protein S27a (Ribosomal_S27)	Ribosomal protein S27a	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].	Domain
U [auth E]	PF07650	KH domain (KH_2)	KH domain		Domain
U [auth E]	PF00253	Ribosomal protein S14p/S29e (Ribosomal_S14)	Ribosomal protein S14p/S29e	-	Family
U [auth E]	PF00189	Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)	Ribosomal protein S3, C-terminal domain	This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.	Domain
Q [auth Z]	PF01282	Ribosomal protein S24e (Ribosomal_S24e)	Ribosomal protein S24e	-	Family
P [auth Y]	PF00164	Ribosomal protein S12/S23 (Ribosom_S12_S23)	Ribosomal protein S12/S23	This protein is known as S12 in bacteria and archaea and S23 in eukaryotes.	Domain
O [auth X]	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8		Domain
L [auth O]	PF08069	Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)	Ribosomal S13/S15 N-terminal domain	This domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].	Domain
L [auth O]	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15		Domain
K [auth M]	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17		Domain
K [auth M]	PF16205	Ribosomal_S17 N-terminal (Ribosomal_S17_N)	Ribosomal_S17 N-terminal	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
J [auth K]	uS4	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex
M [auth P]	uS11	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex ribosome cytoplasm
W [auth L]	eS10	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
CA [auth U]	eS19	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
OA [auth 6]	Eukaryotic translation initiation factor 3 subunit K	translation factor activity translation initiation factor activity ribonucleoprotein complex binding protein-containing complex binding binding ribosome binding RNA binding nucleic acid binding	regulation of cellular process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression translational initiation protein metabolic process regulation of biosynthetic process regulation of biological process regulation of translational initiation regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression regulation of cellular process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression translational initiation protein metabolic process regulation of biosynthetic process regulation of biological process regulation of translational initiation regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of translation regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process ribonucleoprotein complex biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis protein-containing complex organization formation of cytoplasmic translation initiation complex cytoplasmic translation cytoplasmic translational initiation	protein-containing complex cellular anatomical structure intracellular anatomical structure eukaryotic 43S preinitiation complex ribonucleoprotein complex cytosolic translation preinitiation complex cytoplasm eukaryotic translation initiation factor 3 complex eukaryotic 48S preinitiation complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
I [auth J]	eS8	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex
H [auth I]	eS7	structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular component organization or biogenesis RNA processing rRNA metabolic process ribosomal small subunit biogenesis protein metabolic process translation protein biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen 90S preribosome preribosome protein-containing complex ribonucleoprotein complex cytosolic small ribosomal subunit small ribosomal subunit ribosomal subunit cytosolic ribosome ribosome cytoplasm cytosol nuclear protein-containing complex small-subunit processome centrosome microtubule organizing center cytoskeleton microtubule cytoskeleton
G [auth H]	eS6	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex
F	eS4	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex
E [auth D]	uS5	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
QA [auth 8]	Eukaryotic translation initiation factor 3 subunit M	translation factor activity translation initiation factor activity	ribonucleoprotein complex biogenesis protein biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly translational initiation cellular component organization or biogenesis protein metabolic process protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process ribonucleoprotein complex biogenesis protein biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly translational initiation cellular component organization or biogenesis protein metabolic process protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process macromolecule metabolic process	protein-containing complex cellular anatomical structure intracellular anatomical structure eukaryotic 43S preinitiation complex ribonucleoprotein complex cytosolic translation preinitiation complex cytoplasm eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex eukaryotic translation initiation factor 3 complex, eIF3m
PA [auth 7]	Eukaryotic translation initiation factor 3 subunit L	translation factor activity translation initiation factor activity	viral gene expression viral process viral translational termination-reinitiation viral translation ribonucleoprotein complex biogenesis protein biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly translational initiation cellular component organization or biogenesis viral gene expression viral process viral translational termination-reinitiation viral translation ribonucleoprotein complex biogenesis protein biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly translational initiation cellular component organization or biogenesis protein metabolic process protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen fibrillar center organelle membraneless organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen fibrillar center organelle membraneless organelle nuclear lumen protein-containing complex eukaryotic 43S preinitiation complex ribonucleoprotein complex cytosolic translation preinitiation complex cytoplasm eukaryotic 48S preinitiation complex nucleoplasm eukaryotic translation initiation factor 3 complex synapse cell junction
NA [auth 5]	Eukaryotic translation initiation factor 3 subunit H	translation factor activity translation initiation factor activity peptidase activity catalytic activity, acting on a protein metallopeptidase activity hydrolase activity catalytic activity	ribonucleoprotein complex biogenesis protein biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly translational initiation cellular component organization or biogenesis protein metabolic process protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process ribonucleoprotein complex biogenesis protein biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly translational initiation cellular component organization or biogenesis protein metabolic process protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process macromolecule metabolic process	protein-containing complex cellular anatomical structure intracellular anatomical structure eukaryotic 43S preinitiation complex ribonucleoprotein complex cytosolic translation preinitiation complex cytoplasm eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex
D [auth C]	eS1	structural molecule activity structural constituent of ribosome	developmental process cellular developmental process cell differentiation cellular process biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
MA [auth 4]	Eukaryotic translation initiation factor 3 subunit F	translation factor activity translation initiation factor activity cysteine-type peptidase activity ubiquitin-like protein peptidase activity peptidase activity cysteine-type deubiquitinase activity catalytic activity, acting on a protein hydrolase activity catalytic activity deubiquitinase activity protein binding binding translation initiation factor binding identical protein binding translation factor activity translation initiation factor activity cysteine-type peptidase activity ubiquitin-like protein peptidase activity peptidase activity cysteine-type deubiquitinase activity catalytic activity, acting on a protein hydrolase activity catalytic activity deubiquitinase activity protein binding binding translation initiation factor binding identical protein binding metal-dependent deubiquitinase activity metallopeptidase activity	viral gene expression viral process viral translation IRES-dependent viral translational initiation ribonucleoprotein complex biogenesis protein biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly translational initiation cellular component organization or biogenesis viral gene expression viral process viral translation IRES-dependent viral translational initiation ribonucleoprotein complex biogenesis protein biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly translational initiation cellular component organization or biogenesis protein metabolic process protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process macromolecule metabolic process	protein-containing complex cellular anatomical structure intracellular anatomical structure eukaryotic 43S preinitiation complex ribonucleoprotein complex cytosolic translation preinitiation complex cytoplasm synapse cell junction eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex eukaryotic translation initiation factor 3 complex, eIF3m
LA [auth 3]	Eukaryotic translation initiation factor 3 subunit E	translation factor activity translation initiation factor activity	regulation of cellular process positive regulation of protein metabolic process positive regulation of biological process positive regulation of translation protein biosynthetic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of cellular process regulation of biosynthetic process regulation of cellular process positive regulation of protein metabolic process positive regulation of biological process positive regulation of translation protein biosynthetic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression regulation of translation regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process catabolic process nuclear-transcribed mRNA catabolic process, nonsense-mediated decay negative regulation of biological process RNA metabolic process macromolecule catabolic process nucleobase-containing compound metabolic process negative regulation of cellular process RNA catabolic process negative regulation of macromolecule metabolic process mRNA catabolic process nuclear-transcribed mRNA catabolic process negative regulation of metabolic process mRNA metabolic process nucleic acid metabolic process nucleobase-containing compound catabolic process negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process nucleic acid catabolic process ribonucleoprotein complex biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly translational initiation cellular component organization or biogenesis protein-containing complex organization formation of cytoplasmic translation initiation complex cytoplasmic translation cytoplasmic translational initiation	protein-containing complex cellular anatomical structure intracellular anatomical structure eukaryotic 43S preinitiation complex ribonucleoprotein complex cytosolic translation preinitiation complex cytoplasm cytosol postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization organelle synapse protein-containing complex cellular anatomical structure intracellular anatomical structure eukaryotic 43S preinitiation complex ribonucleoprotein complex cytosolic translation preinitiation complex cytoplasm cytosol postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization organelle synapse cell junction asymmetric synapse eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex eukaryotic translation initiation factor 3 complex, eIF3e membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear body intracellular organelle nucleoplasm organelle lumen membraneless organelle PML body nuclear lumen
KA [auth 2]	Eukaryotic translation initiation factor 3 subunit C	translation factor activity translation initiation factor activity protein binding binding translation initiation factor binding RNA binding nucleic acid binding	ribonucleoprotein complex biogenesis protein biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly translational initiation cellular component organization or biogenesis protein metabolic process protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process ribonucleoprotein complex biogenesis protein biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly translational initiation cellular component organization or biogenesis protein metabolic process protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process macromolecule metabolic process	protein-containing complex cellular anatomical structure intracellular anatomical structure eukaryotic 43S preinitiation complex ribonucleoprotein complex cytosolic translation preinitiation complex cytoplasm eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex eukaryotic translation initiation factor 3 complex, eIF3m
JA [auth 1]	Eukaryotic translation initiation factor 3 subunit A	translation factor activity translation initiation factor activity RNA binding binding nucleic acid binding mRNA binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process translation reinitiation cytoplasmic translation cytoplasmic translational initiation metabolic process cellular process translational initiation protein metabolic process macromolecule metabolic process primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process translation reinitiation cytoplasmic translation cytoplasmic translational initiation metabolic process cellular process translational initiation protein metabolic process macromolecule metabolic process viral gene expression viral process viral translation IRES-dependent viral translational initiation viral translational termination-reinitiation ribonucleoprotein complex biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis protein-containing complex organization formation of cytoplasmic translation initiation complex	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen protein-containing complex eukaryotic 43S preinitiation complex ribonucleoprotein complex cytosolic translation preinitiation complex cytoplasm multi-eIF complex cytosol postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization synapse cell junction asymmetric synapse eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex eukaryotic translation initiation factor 3 complex, eIF3e nucleoplasm eukaryotic translation initiation factor 3 complex, eIF3m
IA [auth h]	RACK1	translation regulator activity ribonucleoprotein complex binding protein-containing complex binding binding ribosome binding	rhythmic process developmental process multicellular organism development multicellular organismal process anatomical structure morphogenesis embryonic morphogenesis anatomical structure development embryo development gastrulation cellular process apoptotic process cell death programmed cell death	somatodendritic compartment cell body cellular anatomical structure perikaryon neuronal cell body intracellular anatomical structure perinuclear region of cytoplasm cytoplasm cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection phagocytic cup somatodendritic compartment cell body cellular anatomical structure perikaryon neuronal cell body intracellular anatomical structure perinuclear region of cytoplasm cytoplasm cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection phagocytic cup cell periphery plasma membrane membrane protein-containing complex ribonucleoprotein complex intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome membrane-bounded organelle nucleus intracellular membrane-bounded organelle
HA [auth g]	eS31	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex
GA [auth e]	eS29	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol rough endoplasmic reticulum membrane-bounded organelle endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system
FA [auth d]	eS28	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly RNA metabolic process rRNA processing nucleobase-containing compound biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process maturation of SSU-rRNA RNA processing rRNA metabolic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex preribosome nuclear protein-containing complex small-subunit processome ribonucleoprotein complex synapse cell junction cytosolic small ribosomal subunit small ribosomal subunit ribosomal subunit rough endoplasmic reticulum endoplasmic reticulum endomembrane system
EA [auth a]	eS25	structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular component organization or biogenesis RNA processing rRNA metabolic process ribosomal small subunit biogenesis	postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse postsynaptic specialization organelle synapse cell junction asymmetric synapse membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse postsynaptic specialization organelle synapse cell junction asymmetric synapse membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle organelle lumen membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
DA [auth V]	uS10	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome cytosolic ribosome cytoplasm cytosol
C [auth B]	uS2	protein binding binding virus receptor activity exogenous protein binding structural molecule activity structural constituent of ribosome extracellular matrix binding laminin binding cell adhesion molecule binding laminin receptor activity cell adhesion mediator activity	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cell periphery cellular anatomical structure plasma membrane membrane cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex cell periphery cellular anatomical structure plasma membrane membrane cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol membrane-bounded organelle nucleus intracellular membrane-bounded organelle
BA [auth T]	uS13	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome cytosolic ribosome cytoplasm cytosol
AA [auth S]	eS17	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex
Z [auth R]	uS9	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process maturation of SSU-rRNA cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process maturation of SSU-rRNA cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process ribosomal small subunit biogenesis nucleic acid metabolic process biosynthetic process cellular process metabolic process macromolecule metabolic process protein metabolic process translation protein biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
Y [auth Q]	uS19	enzyme regulator activity molecular function inhibitor activity ubiquitin-protein transferase regulator activity ubiquitin-protein transferase inhibitor activity ubiquitin ligase inhibitor activity molecular function regulator activity enzyme inhibitor activity protein binding binding MDM2/MDM4 family protein binding RNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction regulation of signal transduction by p53 class mediator positive regulation of signal transduction by p53 class mediator cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction regulation of signal transduction by p53 class mediator positive regulation of signal transduction by p53 class mediator signal transduction positive regulation of cellular process regulation of biological process regulation of signaling biological regulation positive regulation of intracellular signal transduction signal transduction by p53 class mediator regulation of response to stimulus regulation of cell communication cellular process positive regulation of signaling establishment of organelle localization cellular localization ribonucleoprotein complex biogenesis nucleocytoplasmic transport transport nuclear transport ribosomal subunit export from nucleus intracellular transport establishment of localization cellular component biogenesis localization ribosome biogenesis ribosomal small subunit export from nucleus organelle localization establishment of localization in cell cellular component organization or biogenesis nuclear export ribosome localization RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process metabolic process macromolecule metabolic process RNA processing rRNA metabolic process organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribosome assembly protein metabolic process translation protein biosynthetic process	intracellular organelle cellular anatomical structure intracellular anatomical structure cytosolic ribosome organelle membraneless organelle intracellular membraneless organelle ribosome cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit intracellular organelle cellular anatomical structure intracellular anatomical structure cytosolic ribosome organelle membraneless organelle intracellular membraneless organelle ribosome cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex
X [auth N]	eS12	structural molecule activity structural constituent of ribosome	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway positive regulation of biological process regulation of signal transduction cell communication positive regulation of response to stimulus positive regulation of Wnt signaling pathway signal transduction Wnt signaling pathway positive regulation of cellular process positive regulation of canonical Wnt signaling pathway regulation of biological process regulation of signaling cell surface receptor signaling pathway regulation of Wnt signaling pathway biological regulation regulation of response to stimulus regulation of cell communication positive regulation of signaling biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol Golgi apparatus endomembrane system protein-containing complex preribosome nuclear protein-containing complex small-subunit processome ribonucleoprotein complex cytosolic small ribosomal subunit small ribosomal subunit ribosomal subunit
V [auth G]	uS7	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex ribosome cytosolic ribosome cytoplasm cytosol
U [auth E]	uS3	DNA binding binding nucleic acid binding DNA-(apurinic or apyrimidinic site) endonuclease activity endonuclease activity catalytic activity, acting on a nucleic acid DNA nuclease activity DNA endonuclease activity catalytic activity, acting on DNA nuclease activity class I DNA-(apurinic or apyrimidinic site) endonuclease activity lyase activity catalytic activity carbon-oxygen lyase activity DNA binding binding nucleic acid binding DNA-(apurinic or apyrimidinic site) endonuclease activity endonuclease activity catalytic activity, acting on a nucleic acid DNA nuclease activity DNA endonuclease activity catalytic activity, acting on DNA nuclease activity class I DNA-(apurinic or apyrimidinic site) endonuclease activity lyase activity catalytic activity carbon-oxygen lyase activity RNA binding structural molecule activity structural constituent of ribosome	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction regulation of programmed cell death positive regulation of apoptotic signaling pathway cell communication positive regulation of response to stimulus signal transduction positive regulation of cellular process cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction regulation of programmed cell death positive regulation of apoptotic signaling pathway cell communication positive regulation of response to stimulus signal transduction positive regulation of cellular process regulation of biological process regulation of signaling positive regulation of programmed cell death regulation of apoptotic process biological regulation cell death positive regulation of apoptotic process apoptotic signaling pathway regulation of response to stimulus regulation of cell communication cellular process apoptotic process programmed cell death positive regulation of signaling regulation of apoptotic signaling pathway primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process macromolecule metabolic process DNA repair cell division regulation of biosynthetic process regulation of protein metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression regulation of gene expression biosynthetic process regulation of translation regulation of macromolecule biosynthetic process protein metabolic process regulation of metabolic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus intracellular organelle lumen organelle lumen membraneless organelle nuclear lumen cytosolic ribosome ribosome cytosol cytoskeleton spindle microtubule cytoskeleton cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex
T [auth f]	eS30	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol membrane-bounded organelle nucleus intracellular membrane-bounded organelle
B [auth 0]	CrPV 5'-UTR IRES	-	-	-
S [auth c]	eS27	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process metabolic process macromolecule metabolic process RNA processing rRNA metabolic process protein metabolic process translation protein biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex preribosome nuclear protein-containing complex small-subunit processome ribonucleoprotein complex postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization synapse cell junction asymmetric synapse cytosolic small ribosomal subunit small ribosomal subunit ribosomal subunit
R [auth b]	eS26	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol rough endoplasmic reticulum membrane-bounded organelle endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system
Q [auth Z]	eS24	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
P [auth Y]	uS12	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex ribosome cytosolic ribosome cytoplasm cytosol rough endoplasmic reticulum endoplasmic reticulum endomembrane system
O [auth X]	uS8	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex
N [auth W]	eS21	-	-	-
L [auth O]	uS15	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
K [auth M]	uS17	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
A	18S rRNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
J [auth K]	IPR002942	RNA-binding S4 domain	Domain
J [auth K]	IPR022801	Small ribosomal subunit protein uS4	Family
J [auth K]	IPR005710	Small ribosomal subunit protein uS4, eukaryota/archaea	Family
J [auth K]	IPR018079	Small ribosomal subunit protein uS4, conserved site	Conserved Site
J [auth K]	IPR001912	Small ribosomal subunit protein uS4, N-terminal	Domain
J [auth K]	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
M [auth P]	IPR001971	Small ribosomal subunit protein uS11	Family
M [auth P]	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
M [auth P]	IPR018102	Small ribosomal subunit protein uS11, conserved site	Conserved Site
W [auth L]	IPR037447	Small ribosomal subunit protein eS10	Family
W [auth L]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
W [auth L]	IPR005326	Plectin/eS10, N-terminal	Domain
CA [auth U]	IPR001266	Small ribosomal subunit protein eS19	Family
CA [auth U]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
CA [auth U]	IPR018277	Small ribosomal subunit protein eS19, conserved site	Conserved Site
CA [auth U]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
OA [auth 6]	IPR016024	Armadillo-type fold	Homologous Superfamily
OA [auth 6]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
OA [auth 6]	IPR033464	CSN8/PSMD8/EIF3K	Domain
OA [auth 6]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
OA [auth 6]	IPR016020	Translation initiation factor 3, subunit 12, N-terminal, eukaryotic	Homologous Superfamily
OA [auth 6]	IPR000717	Proteasome component (PCI) domain	Domain
OA [auth 6]	IPR009374	Eukaryotic translation initiation factor 3 subunit K	Family
I [auth J]	IPR001047	Small ribosomal subunit protein eS8	Family
I [auth J]	IPR042563	Small ribosomal subunit protein eS8 subdomain, eukaryota	Homologous Superfamily
I [auth J]	IPR022309	Ribosomal protein eS8/ribosomal biogenesis NSA2	Family
I [auth J]	IPR018283	Small ribosomal subunit protein eS8, conserved site	Conserved Site
H [auth I]	IPR000554	Small ribosomal subunit protein eS7	Family
H [auth I]	IPR047861	Small ribosomal subunit protein eS7, conserved site	Conserved Site
G [auth H]	IPR014401	Small ribosomal subunit protein eS6-like	Family
G [auth H]	IPR001377	Small ribosomal subunit protein eS6	Family
G [auth H]	IPR018282	Small ribosomal subunit protein eS6, conserved site	Conserved Site
F	IPR018199	Small ribosomal subunit protein eS4, N-terminal, conserved site	Conserved Site
F	IPR013843	Small ribosomal subunit protein eS4, N-terminal	Domain
F	IPR032277	Small ribosomal subunit protein eS4, C-terminal domain	Domain
F	IPR002942	RNA-binding S4 domain	Domain
F	IPR013845	Small ribosomal subunit protein eS4, central region	Domain
F	IPR000876	Small ribosomal subunit protein eS4	Family
F	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
F	IPR038237	Small ribosomal subunit protein eS4, central domain superfamily	Homologous Superfamily
F	IPR041982	Small ribosomal subunit protein eS4, KOW domain	Domain
F	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
F	IPR005824	KOW	Domain
E [auth D]	IPR005711	Small ribosomal subunit protein uS5, eukaryota_archaea	Family
E [auth D]	IPR000851	Small ribosomal subunit protein uS5	Family
E [auth D]	IPR005324	Small ribosomal subunit protein uS5, C-terminal	Domain
E [auth D]	IPR013810	Small ribosomal subunit protein uS5, N-terminal	Domain
E [auth D]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
E [auth D]	IPR018192	Small ribosomal subunit protein uS5, N-terminal, conserved site	Conserved Site
E [auth D]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
QA [auth 8]	IPR045237	Eukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7	Family
QA [auth 8]	IPR000717	Proteasome component (PCI) domain	Domain
QA [auth 8]	IPR016024	Armadillo-type fold	Homologous Superfamily
QA [auth 8]	IPR040750	eIF3 subunit M, C-terminal helix domain	Domain
QA [auth 8]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
QA [auth 8]	IPR027528	Eukaryotic translation initiation factor 3 subunit M	Family
PA [auth 7]	IPR000717	Proteasome component (PCI) domain	Domain
PA [auth 7]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
PA [auth 7]	IPR019382	Translation initiation factor 3 complex subunit L	Family
NA [auth 5]	IPR037518	MPN domain	Domain
NA [auth 5]	IPR027524	Eukaryotic translation initiation factor 3 subunit H	Family
NA [auth 5]	IPR045810	eIF3h, C-terminal	Domain
NA [auth 5]	IPR050242	JAMM/MPN+ metalloenzymes, peptidase M67A	Family
NA [auth 5]	IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	Domain
D [auth C]	IPR001593	Small ribosomal subunit protein eS1	Family
D [auth C]	IPR018281	Small ribosomal subunit protein eS1, conserved site	Conserved Site
D [auth C]	IPR027500	Small ribosomal subunit protein eS1, eukaryota	Family
MA [auth 4]	IPR027531	Eukaryotic translation initiation factor 3 subunit F	Family
MA [auth 4]	IPR024969	EIF3F/CSN6-like, C-terminal	Domain
MA [auth 4]	IPR037518	MPN domain	Domain
MA [auth 4]	IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	Domain
LA [auth 3]	IPR016650	Eukaryotic translation initiation factor 3 subunit E	Family
LA [auth 3]	IPR019010	Eukaryotic translation initiation factor 3 subunit E, N-terminal	Domain
LA [auth 3]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
LA [auth 3]	IPR000717	Proteasome component (PCI) domain	Domain
KA [auth 2]	IPR027516	Eukaryotic translation initiation factor 3 subunit C	Family
KA [auth 2]	IPR000717	Proteasome component (PCI) domain	Domain
KA [auth 2]	IPR008905	Eukaryotic translation initiation factor 3 subunit C, N-terminal domain	Domain
KA [auth 2]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
KA [auth 2]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
JA [auth 1]	IPR027512	Eukaryotic translation initiation factor 3 subunit A	Family
JA [auth 1]	IPR000717	Proteasome component (PCI) domain	Domain
JA [auth 1]	IPR054711	eIF3a, PCI domain, TPR-like region	Domain
IA [auth h]	IPR019775	WD40 repeat, conserved site	Conserved Site
IA [auth h]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
IA [auth h]	IPR045223	Small ribosomal subunit protein RACK1-like	Family
IA [auth h]	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
IA [auth h]	IPR001680	WD40 repeat	Repeat
IA [auth h]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
HA [auth g]	IPR019954	Ubiquitin conserved site	Conserved Site
HA [auth g]	IPR000626	Ubiquitin-like domain	Domain
HA [auth g]	IPR038582	Small ribosomal subunit protein eS31 eukaryotic superfamily	Homologous Superfamily
HA [auth g]	IPR002906	Small ribosomal subunit protein eS31	Domain
HA [auth g]	IPR019956	Ubiquitin domain	Domain
HA [auth g]	IPR050158	Ubiquitin and ubiquitin-like	Family
HA [auth g]	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
HA [auth g]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
GA [auth e]	IPR001209	Small ribosomal subunit protein uS14	Family
GA [auth e]	IPR018271	Small ribosomal subunit protein uS14, conserved site	Conserved Site
GA [auth e]	IPR039744	Small ribosomal subunit protein uS14, eukaryotes/archaea	Family
GA [auth e]	IPR043140	Small ribosomal subunit protein uS14 superfamily	Homologous Superfamily
FA [auth d]	IPR028626	Ribosomal protein eS28 conserved site	Conserved Site
FA [auth d]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
FA [auth d]	IPR000289	Small ribosomal subunit protein eS28	Family
EA [auth a]	IPR004977	Small ribosomal subunit protein eS25	Family
EA [auth a]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
DA [auth V]	IPR001848	Small ribosomal subunit protein uS10	Family
DA [auth V]	IPR027486	Small ribosomal subunit protein uS10 domain	Domain
DA [auth V]	IPR036838	Small ribosomal subunit protein uS10 domain superfamily	Homologous Superfamily
DA [auth V]	IPR005729	Small ribosomal subunit protein uS10, eukaryotic/archaeal	Family
DA [auth V]	IPR018268	Small ribosomal subunit protein uS10, conserved site	Conserved Site
C [auth B]	IPR032281	Small ribosomal subunit protein uS2, C-terminal domain	Domain
C [auth B]	IPR027498	Small ribosomal subunit protein uS2, eukaryota	Family
C [auth B]	IPR027504	Small ribosomal subunit protein uS2, vertebrates	Family
C [auth B]	IPR023591	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	Homologous Superfamily
C [auth B]	IPR018130	Small ribosomal subunit protein uS2, conserved site	Conserved Site
C [auth B]	IPR001865	Small ribosomal subunit protein uS2	Family
C [auth B]	IPR005707	Small ribosomal subunit protein uS2, eukaryota/archaea	Family
BA [auth T]	IPR027437	Small ribosomal subunit protein uS13, C-terminal	Homologous Superfamily
BA [auth T]	IPR001892	Small ribosomal subunit protein uS13	Family
BA [auth T]	IPR018269	Small ribosomal subunit protein uS13, conserved site	Conserved Site
BA [auth T]	IPR010979	Small ribosomal subunit protein uS13-like, H2TH	Homologous Superfamily
AA [auth S]	IPR036401	Small ribosomal subunit protein eS17 superfamily	Homologous Superfamily
AA [auth S]	IPR001210	Small ribosomal subunit protein eS17	Family
AA [auth S]	IPR018273	Small ribosomal subunit protein eS17, conserved site	Conserved Site
Z [auth R]	IPR020574	Small ribosomal subunit protein uS9, conserved site	Conserved Site
Z [auth R]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
Z [auth R]	IPR000754	Small ribosomal subunit protein uS9	Family
Z [auth R]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
Y [auth Q]	IPR023575	Small ribosomal subunit protein uS19, superfamily	Homologous Superfamily
Y [auth Q]	IPR020934	Small ribosomal subunit protein uS19, conserved site	Conserved Site
Y [auth Q]	IPR002222	Small ribosomal subunit protein uS19	Family
Y [auth Q]	IPR005713	Small ribosomal subunit protein uS19, eukaryota/archaea	Family
X [auth N]	IPR000530	Small ribosomal subunit protein eS12	Family
X [auth N]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
X [auth N]	IPR047860	Small ribosomal subunit protein eS12, conserved site	Conserved Site
X [auth N]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
V [auth G]	IPR020606	Small ribosomal subunit protein uS7, conserved site	Conserved Site
V [auth G]	IPR000235	Small ribosomal subunit protein uS7	Family
V [auth G]	IPR036823	Small ribosomal subunit protein uS7 domain superfamily	Homologous Superfamily
V [auth G]	IPR023798	Small ribosomal subunit protein uS7 domain	Domain
V [auth G]	IPR005716	Ribosomal protein uS7, eukaryotic/archaeal	Family
U [auth E]	IPR005703	Small ribosomal subunit protein uS3, eukaryota/archaeal	Family
U [auth E]	IPR001351	Small ribosomal subunit protein uS3, C-terminal	Domain
U [auth E]	IPR009019	K homology domain superfamily, prokaryotic type	Homologous Superfamily
U [auth E]	IPR004044	K Homology domain, type 2	Domain
U [auth E]	IPR015946	K homology domain-like, alpha/beta	Homologous Superfamily
U [auth E]	IPR036419	Ribosomal protein S3, C-terminal domain superfamily	Homologous Superfamily
U [auth E]	IPR018280	Small ribosomal subunit protein uS3, conserved site	Conserved Site
T [auth f]	IPR039415	Ubiquitin-like protein FUBI	Domain
T [auth f]	IPR019956	Ubiquitin domain	Domain
T [auth f]	IPR019954	Ubiquitin conserved site	Conserved Site
T [auth f]	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
T [auth f]	IPR000626	Ubiquitin-like domain	Domain
T [auth f]	IPR006846	Small ribosomal subunit protein eS30	Family
S [auth c]	IPR023407	Small ribosomal subunit protein eS27, zinc-binding domain superfamily	Homologous Superfamily
S [auth c]	IPR000592	Small ribosomal subunit protein eS27	Family
S [auth c]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
R [auth b]	IPR038551	Ribosomal protein eS26 superfamily	Homologous Superfamily
R [auth b]	IPR000892	Small ribosomal subunit protein eS26	Family
R [auth b]	IPR047864	Ribosomal protein eS26, conserved site	Conserved Site
Q [auth Z]	IPR053709	Eukaryotic Ribosomal Protein eS24	Homologous Superfamily
Q [auth Z]	IPR001976	Small ribosomal subunit protein eS24	Family
Q [auth Z]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
Q [auth Z]	IPR018098	Small ribosomal subunit protein eS24 conserved site	Conserved Site
P [auth Y]	IPR006032	Small ribosomal subunit protein uS12	Family
P [auth Y]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
P [auth Y]	IPR005680	Small ribosomal subunit protein uS12, eukaryota/archaea	Family
O [auth X]	IPR000630	Small ribosomal subunit protein uS8	Family
O [auth X]	IPR047863	Small ribosomal subunit protein uS8, conserved site	Conserved Site
O [auth X]	IPR035987	Small ribosomal subunit protein uS8 superfamily	Homologous Superfamily
L [auth O]	IPR012606	Small ribosomal subunit protein uS15, N-terminal	Domain
L [auth O]	IPR009068	uS15/NS1, RNA-binding domain superfamily	Homologous Superfamily
L [auth O]	IPR023029	Small ribosomal subunit protein uS15, archaea/eukaryota	Family
L [auth O]	IPR000589	Small ribosomal subunit protein uS15	Family
K [auth M]	IPR019979	Small ribosomal subunit protein uS17, conserved site	Conserved Site
K [auth M]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
K [auth M]	IPR000266	Small ribosomal subunit protein uS17	Family
K [auth M]	IPR032440	Small ribosomal subunit protein uS17, N-terminal	Domain
K [auth M]	IPR028333	Small ribosomal subunit protein uS17, archaeal/eukaryotic	Family