6VYV | pdb_00006vyv

Human mAbs broadly protect against infection of arthritiogenic alphaviruses by recognizing conserved elements of the MXR8 receptor binding domain


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Pe6vyvP1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
N [auth O]e6vyvO1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
L [auth N]e6vyvN1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
J [auth M]e6vyvM1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
O [auth L]e6vyvL1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
M [auth K]e6vyvK1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
K [auth J]e6vyvJ1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
Ie6vyvI1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
He6vyvH1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
Ge6vyvG1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
Fe6vyvF1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
Ee6vyvE1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
De6vyvD1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
Ce6vyvC1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
Be6vyvB1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)
Ae6vyvA1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF:ECOD (v295.2)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
J [auth M],
L [auth N],
N [auth O],
P
mAb CHK-265, broadly protect against arthritogenic alphaviruses L-LAMBDA Mus musculus (house mouse) IGLV1*01, IGLJ1*01, IGLC1*01 V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA IG FAB-GAMMA-1_LAMBDA IMGT (202635-0)
I,
K [auth J],
M [auth K],
O [auth L]
mAb CHK-265, broadly protect against arthritogenic alphaviruses VH-CH1 Mus musculus (house mouse) IGHV9-1*01, IGHJ2*01, IGHG2C*01, IGHG2C*02, IGHG2C*03 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_LAMBDA IMGT (202635-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
J [auth M],
L [auth N],
N [auth O],
P
Light ChainIGLV1 Lambdae2 glycoproteinSAbDab (2026-09-11)
I,
K [auth J],
M [auth K],
O [auth L]
Heavy ChainIGHV9 -e2 glycoproteinSAbDab (2026-09-11)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
J [auth M],
L [auth N],
N [auth O],
P
Fab CHK-265 light chain---
I,
K [auth J],
M [auth K],
O [auth L]
Fab CHK-265 heavy chain---
E, F, G, H
E2 glycoprotein
A, B, C, D
E1 glycoprotein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E, F, G, H
IPR002533Alphavirus E3 spike glycoproteinDomain
E, F, G, H
IPR038055Flaviviral glycoprotein E, dimerisation domainHomologous Superfamily
E, F, G, H
IPR014756Immunoglobulin E-setHomologous Superfamily
E, F, G, H
IPR042304Alphavirus E2 glycoprotein, domain AHomologous Superfamily
E, F, G, H
IPR036253Flavivirus glycoprotein, central and dimerisation domain superfamilyHomologous Superfamily
E, F, G, H
IPR009003Peptidase S1, PA clanHomologous Superfamily
E, F, G, H
IPR042305Alphavirus E2 glycoprotein, domain BHomologous Superfamily
E, F, G, H
IPR042306Alphavirus E2 glycoprotein, domain CHomologous Superfamily
E, F, G, H
IPR000936Alphavirus E2 glycoproteinFamily
E, F, G, H
IPR000930Peptidase S3, togavirinDomain
E, F, G, H
IPR002548Alphavirus E1 glycoproteinDomain
E, F, G, H
IPR000336Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamilyHomologous Superfamily
A, B, C, D
IPR002533Alphavirus E3 spike glycoproteinDomain
A, B, C, D
IPR038055Flaviviral glycoprotein E, dimerisation domainHomologous Superfamily
A, B, C, D
IPR014756Immunoglobulin E-setHomologous Superfamily
A, B, C, D
IPR042304Alphavirus E2 glycoprotein, domain AHomologous Superfamily
A, B, C, D
IPR036253Flavivirus glycoprotein, central and dimerisation domain superfamilyHomologous Superfamily
A, B, C, D
IPR009003Peptidase S1, PA clanHomologous Superfamily
A, B, C, D
IPR042305Alphavirus E2 glycoprotein, domain BHomologous Superfamily
A, B, C, D
IPR042306Alphavirus E2 glycoprotein, domain CHomologous Superfamily
A, B, C, D
IPR000936Alphavirus E2 glycoproteinFamily
A, B, C, D
IPR000930Peptidase S3, togavirinDomain
A, B, C, D
IPR002548Alphavirus E1 glycoproteinDomain
A, B, C, D
IPR000336Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamilyHomologous Superfamily