Cryo-EM structure of Arabidopsis thaliana MSL1
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G | Pro_isomerase | e6vxmG1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Pro_isomerase | ECOD (v294.1) |
| F | Pro_isomerase | e6vxmF1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Pro_isomerase | ECOD (v294.1) |
| E | Pro_isomerase | e6vxmE1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Pro_isomerase | ECOD (v294.1) |
| D | Pro_isomerase | e6vxmD1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Pro_isomerase | ECOD (v294.1) |
| C | Pro_isomerase | e6vxmC1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Pro_isomerase | ECOD (v294.1) |
| B | Pro_isomerase | e6vxmB1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Pro_isomerase | ECOD (v294.1) |
| A | Beta-lactamase2 | e6vxmA1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Beta-lactamase2 | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00924 | Mechanosensitive ion channel, beta-domain (MS_channel_2nd) | Mechanosensitive ion channel, beta-domain | This entry includes small conductance mechanosensitive channels (MscS), which assembles to a homoheptameric complex [1-6]. Each monomer consists of a N-terminal transmembrane region and a large cytoplasmic segment composed of a five-stranded antipara ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR010920 | LSM domain superfamily | Homologous Superfamily | |
| IPR006685 | Mechanosensitive ion channel MscS | Domain | |
| IPR011014 | Mechanosensitive ion channel MscS, transmembrane-2 | Homologous Superfamily | |
| IPR023408 | Mechanosensitive ion channel MscS, beta-domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Small conductance mechanosensitive ion channel (MscS) | Small conductance mechanosensitive ion channels |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Mechanosensitive | MSL1 MscS voltage-modulated mechanosensitive channel homolog in nanodiscs |














