6VST | pdb_00006vst

Arginase from Medicago truncatula in complex with ornithine


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
LSCOP2B SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2B (2022-06-29)
FSCOP2 FamilyArginase-like amidino hydrolases 8097855 4000424 SCOP2 (2022-06-29)
FSCOP2 SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2 (2022-06-29)
ESCOP2B SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyArginase/deacetylase-like 8097856 3000260 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
LArginasee6vstL1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)
KArginasee6vstK1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)
JArginasee6vstJ1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)
IArginasee6vstI1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)
HArginasee6vstH1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)
GArginasee6vstG1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)
FArginasee6vstF1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)
EArginasee6vstE1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)
DArginasee6vstD1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)
CArginasee6vstC1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)
BArginasee6vstB1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)
AArginasee6vstA1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: ArginaseECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
K3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase Chain ACATH (utative)
I3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase Chain ACATH (utative)
G3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase Chain ACATH (utative)
E3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase Chain ACATH (utative)
C3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase Chain ACATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00491Arginase family (Arginase)Arginase familyDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Arginase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR020855Ureohydrolase, manganese-binding siteBinding Site
A, B, C, D, E
IPR023696Ureohydrolase domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR006035UreohydrolaseFamily