6VQH | pdb_00006vqh

Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 3 (from focused refinement)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth g]CBSe6vqhg1 A: a/b three-layered sandwichesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: CBSECOD (v294.1)
J [auth h]CBSe6vqhh1 A: a/b three-layered sandwichesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: CBSECOD (v294.1)
K [auth i]CBSe6vqhi1 A: a/b three-layered sandwichesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: CBSECOD (v294.1)
L [auth j]CBSe6vqhj1 A: a/b three-layered sandwichesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: CBSECOD (v294.1)
M [auth k]CBSe6vqhk1 A: a/b three-layered sandwichesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: CBSECOD (v294.1)
N [auth l]CBSe6vqhl1 A: a/b three-layered sandwichesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: CBSECOD (v294.1)
O [auth m]CBSe6vqhm1 A: a/b three-layered sandwichesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: CBSECOD (v294.1)
P [auth n]CBSe6vqhn1 A: a/b three-layered sandwichesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: CBSECOD (v294.1)
Q [auth o]CBSe6vqho1 A: a/b three-layered sandwichesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: CBSECOD (v294.1)
F [auth d]CBSe6vqhd1 A: a/b three-layered sandwichesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: CBSECOD (v294.1)
B [auth L]CBSe6vqhL1 A: a/b three-layered sandwichesX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Family A G protein-coupled receptor-likeF: CBSECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth L]PF01990ATP synthase (F/14-kDa) subunit (ATP-synt_F)ATP synthase (F/14-kDa) subunit- Family
B [auth L]PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. Domain
A [auth H]PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
V-type proton ATPase 16 kDa proteolipid subunit
H [auth f]Ribonuclease K
G [auth e]V-type proton ATPase subunit e 2
F [auth d]V-type proton ATPase subunit
E [auth c]V-type proton ATPase subunit S1
D [auth b]ATPase, H+ transporting, V0 subunit B (Predicted), isoform CRA_a -
C [auth a]V-type proton ATPase 116 kDa subunit a isoform 1
B [auth L]V-type proton ATPase subunit F
R [auth p]Renin receptor
A [auth H]ATPase H+-transporting V1 subunit D

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
IPR011555V-ATPase proteolipid subunit C, eukaryoticFamily
IPR000245V-ATPase proteolipid subunitFamily
H [auth f]IPR056552Ribonucl_KappaUnknown
H [auth f]IPR026770Ribonuclease kappaFamily
G [auth e]IPR017385ATPase, V0 complex, subunit e1/e2, metazoaFamily
G [auth e]IPR008389ATPase, V0 complex, subunit e1/e2Family
F [auth d]IPR016727ATPase, V0 complex, subunit DFamily
F [auth d]IPR044911V-type ATP synthase C/D subunit, domain 3 superfamilyHomologous Superfamily
F [auth d]IPR002843ATPase, V0 complex, C/D subunitFamily
F [auth d]IPR036079V-type ATP synthase subunit C/D subunit superfamilyHomologous Superfamily
F [auth d]IPR035067V-type ATPase subunit C/DHomologous Superfamily
E [auth c]IPR046755V-type proton ATPase subunit S1, luminal domainDomain
E [auth c]IPR008388V0 complex accessory subunit Ac45Family
E [auth c]IPR046756V-type proton ATPase subunit S1/VOA1, transmembrane domainDomain
D [auth b]IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
D [auth b]IPR000245V-ATPase proteolipid subunitFamily
D [auth b]IPR002379V-ATPase proteolipid subunit C-like domainDomain
C [auth a]IPR026028ATPase, V0 complex, subunit 116kDa, eukaryoticFamily
C [auth a]IPR002490V-type ATPase, V0 complex, 116kDa subunit familyFamily
B [auth L]IPR005772ATPase, V1 complex, subunit F, eukaryoticFamily
B [auth L]IPR036906ATPase, V1 complex, subunit F superfamilyHomologous Superfamily
B [auth L]IPR008218ATPase, V1 complex, subunit FFamily
R [auth p]IPR056780Renin receptor-like, C-terminal transmembrane spanning segmentDomain
R [auth p]IPR012493Renin receptor-likeFamily
R [auth p]IPR057318Renin receptor, N-terminal domainDomain
A [auth H]IPR002699ATPase, V1 complex, subunit DFamily